Opisthocomus hoazin (hoatzin): 104328633
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Entry
104328633 CDS
T08436
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104328633 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oha01009
]
104328633 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oha04515
]
104328633 (PCDH20)
Protein phosphatases and associated proteins [BR:
oha01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104328633 (PCDH20)
Cell adhesion molecules [BR:
oha04515
]
Cadherins
Protocadherins
104328633 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
He_PIG
Motif
Other DBs
NCBI-GeneID:
104328633
NCBI-ProteinID:
XP_009931962
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
HPAAPQPPLSFTLVSRGLGGQYVQLDNRSGELHTSAVEIDREALCVESSGAAVFGGAAAV
SSSSSSSSSESCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPCFPVPHIRLSVPENAPV
NTRLAIEHPALDPDVGTNGVQTYRLQDNYGVFTLDVEENENGERTPYLIVMGALDRETRE
EYVTVIVAEDGGTPPLVGSATLTIGISDINDNCPQFSDSQLNVTLYGNSSLGTHVATVHA
VDMDLGSNAQITYSYSQKVPQPSRDLFHLDESTGNITLSSKVDGDTLRLHRLIILGNGPG
CIPAVITVLVTIIKVMMRPPEVVPRFIANEVEGVVYLKELEPINTPIAFFTIKDPDEKYK
VNCCLDGEGPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFHVNKIVKVQ
VLDENDNSPIFSQQLIELSIEENNVPNAYLTKLHATDADSGERGQVSYFLGPDAPSYFSL
DKTTGVLTVSTQLDREEKEKYRYTVKAVDSGLPPRESVATVTITVLDKNDNSPRFINKDF
SFFVPENFPGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQ
QSSYILWIEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPI
TEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKV
SDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLKKEPDISIEEKQPQISMEPTHKKMESA
SCMPALVALSIISLGSIALVTGMGIYICLRKGKKHHRAGENLEVQIPLNGRINLHMLEKK
PVEISNI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
caccctgcggccccccagcccccactctccttcaccctggtctcccgtggcttgggggga
cagtacgtgcagctggacaaccgctccggagagctgcacacctcggccgtggagatcgac
cgggaagctctgtgcgtggagagcagtggggctgccgtctttgggggagcagctgctgtc
tcctcctcctcctcctcctcctcttccgagtcatgtctgctgcttctggatgtgctggtg
ctgccgcaggagtacttccgcctggtgaaggtaaaaattgctattcgggatgtcaacgac
aacgcgccctgcttccctgtgccccacatccgtctttcggtgccggagaatgcacctgtg
aatacccgcctggctatcgagcaccccgcccttgaccccgacgtgggcaccaacggtgtc
cagacctaccgcctgcaagataactacggtgtcttcaccctcgatgtggaggagaatgag
aacggggagaggaccccctacctgattgtcatgggggctctggacagggagacacgggag
gagtatgtcacagtcatcgttgctgaggatggggggactcctccgcttgtgggcagtgcc
accctcactattggcatcagcgacatcaatgacaactgcccccagttcagtgactcacag
ctcaacgtcaccctttatgggaactccagtctagggacacatgtggccactgtccacgca
gtagacatggaccttggatccaatgcccagatcacctactcctacagccagaaagtcccc
cagccatccagagacttgttccatctggacgaaagtacaggaaacatcacgctctccagt
aaagttgatggggacactctaagactccacaggctgatcatattgggcaacggtcctggt
tgtatccctgccgtgattacagtgctagtgaccatcatcaaagtaatgatgaggccacct
gaagtcgtccctcgtttcatagctaatgaagtggaaggagtcgtgtacttaaaggaactg
gagcctatcaacacaccgatagcattttttaccatcaaagaccctgatgaaaaatacaaa
gtcaactgctgtttggatggtgaggggcctttcagactttcaccatacaagccgtacaat
aatgagtacctgttagagaccacaaagcctttggactatgaaacacagcagctgtatgaa
atctctgtagttgcatggaactcagaaggatttcatgtcaacaaaatagtcaaagtacag
gttctggatgaaaacgacaactcaccaattttctctcaacagctgatagaattatccatt
gaggagaacaatgttccaaatgcttacttgaccaaattgcatgctacagatgctgacagc
ggagaaagagggcaagtgtcctattttttaggacctgatgccccttcctatttttcttta
gataaaaccacaggagttcttacagtttccacccaactggacagagaagaaaaagagaaa
tacagatacactgtcaaagcagtagattctggactcccgccaagagaatcagtagcaact
gttaccatcactgtattggataaaaatgataatagtccaaggtttattaataaggatttc
agcttttttgtgccggaaaactttccaggttttggtgaaattggagttataagtgtcaca
gatgcggatgcagggcaaaatgggtgggttgccctgtcagttctgaatggaagtgatatt
tttgtcatagatactggaaaaggagttttgagagctaaagtctcgctggacagggagcag
caaagctcgtacattctgtggatcgaagcagttgatggtggtgatcctgccctctcttct
actgcaaaaataactatccttcttctggacataaatgacaacccccctttggtcttgttt
cctcagtctaatatgtcttatttgctggtccttccttctacccttccgggctctcccatc
actgaggtctatgctgtcgataaggacactggcatgaatgcagtcatagcttacagcatc
ataggaagaagaggccctcgaccagagtcctttaggattgaccctaaaactggtaatatc
accttggaagagtccctgatgcaaaatgactatggcctctatcggctgcttgtaaaagtt
agtgatcatggctatccagaacctctccattccactgtcatggtgaaccttttcgtcaat
gacactgttagcaatgagagctacattgaaagtttgttaaaaaaggagcctgatatcagt
atagaagaaaagcaaccacaaatatccatggagcctacgcataaaaaaatggagtcagcg
tcctgcatgcctgccttggtagctctgtcaataataagcttgggttcaatcgctttagta
acagggatgggcatttacatctgtctaagaaaaggaaaaaagcatcacagagcaggtgaa
aacttggaagtacaaatcccattaaatggaagaattaacctgcacatgttggagaagaaa
ccagtggagatttctaacatttga
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