Opisthocomus hoazin (hoatzin): 104328879
Help
Entry
104328879 CDS
T08436
Symbol
SS18L1
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104328879 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oha03036
]
104328879 (SS18L1)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104328879 (SS18L1)
GBAF(ncBAF) complex
104328879 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
104328879
NCBI-ProteinID:
XP_009932242
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MDSGLAQSRRSLPAFQRAACVAGHSNASVPRPRRPEPRGPPQAQQSEPVVDEGVQESAKK
ATKLHKTPSTAKKGECGVTKPQDFNTILVVMCFDRISLMQMLDENHHLIQCIMDYQSKGK
TAECTQYQQILHRNLVYLATIADSNQNMQSLLPAPPTQNINLGPGGMTQSASNQSLHSQS
NLSDAIGTGLPPSSLMQSQISNGPNHVSMQQSGQNTMPTTSLSMTVSSHGTGPGYSHTVP
ASQNVPMQGQGSIGNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMM
SQSNQGNSMMGQRPMGPYRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHG
DYAYQQSSYTEQSYDRSFDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQS
YPGQQQGYGPAQGASSQYSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggattctggactggcacagtcccgccgttccctgccggcattccagcgagcagcctgc
gtggcaggtcacagcaacgcctctgttcctcggccccgccgacctgagcccaggggaccc
ccgcaagctcagcagtcagagcctgtggtggacgagggtgtccaggaaagtgcgaaaaag
gcaacaaaactgcacaaaacaccatccactgccaagaagggtgagtgtggagtaacaaaa
ccacaggactttaatacgattctcgtagtaatgtgttttgatcgtatttctcttatgcag
atgctagatgaaaatcaccacctaatacaatgtattatggattatcagagcaaggggaaa
actgcagaatgtactcaataccaacaaatcttgcacagaaacctggtttacttggcaaca
atagcagattctaaccagaatatgcagtccttgcttcctgctccaccaacgcaaaacata
aacttgggcccaggaggaatgactcagagtgcatccaaccaatctctccattcacagagc
aatctcagtgatgcaatcgggacgggccttcctccttcctccctcatgcagagtcagatt
agcaatggtcctaatcacgtgtctatgcagcagtcaggccagaacactatgcccacgacc
tctctgagtatgactgtcagcagtcatggaactgggcctggttatagccatacagtgcct
gcatctcagaatgtgccaatgcaaggccaggggtcaataggcaattatgtctctcgaaca
aacatcaacatgcagtctaatccagtctccatgatgcaccagcaagcagcaacgtcgcat
tacaactcggcgcaaggagggagccagcattaccagggacagtcctccattgccatgatg
agtcagagcaaccaaggcaacagcatgatgggtcagcgaccaatgggcccttacagagct
tcacagcaaggctcctcacagcagtacatgggtcaggaagaatattacagtgaacagtac
agtcatggacaaggctcatcagaacctatgaatcagcaatactatccagatggacatggt
gattatgcctatcaacagtcatcctatactgagcagagctacgacaggtcatttgacgac
tctacacaacactattacgaaggaggaaattcccagtacagccagcagcaggcaggatac
caacagggagctgcacaacagcaaacctattcccagcagcaatacccaaatcaacaaagt
tacccaggacaacagcaaggatacggtcctgcacaaggagcctcttcacagtattccagc
taccaacaggggcaggggcagcaatatggaagttacagagcttctcagacaggcccatcc
gctcagcaacagaggccttacggctatgagcagggacaatatggaaattaccagcaataa
DBGET
integrated database retrieval system
