Opisthocomus hoazin (hoatzin): 104329101
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Entry
104329101 CDS
T08436
Symbol
PMS2
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03430
Mismatch repair
oha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104329101 (PMS2)
03460 Fanconi anemia pathway
104329101 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oha03400
]
104329101 (PMS2)
DNA repair and recombination proteins [BR:
oha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
104329101 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104329101
NCBI-ProteinID:
XP_009932491
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MKTAPGGGWHLQPARAIGPIDRKAVHRICSGQVVLSLGTAVKELVENSLDAGATNIDIKL
KDHGAELIEVSDNGGGVEEENFEGLTLKHYTSKIQDFSDLTHVETFGFRGEALSSLCALS
DVTIFTCHKSAKVGTRLVFDHNGKITQKTPFPRQQGTTVNIQQLFYTLPVRHKEFQRNIK
KVGICKNGXRYCRHTVLFQXGVRINCTNQVGQGKKSSVISTAGSPSLKENIGAVFGQKQL
QSLSPFVQLPPSEAVCEEYGLNASEVPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRP
CDPAKVVKLVNEVYHLHNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILK
TSLTEMFGSDVNKLNINQKLLDIAGNLKKALPKETEKPHVEMMPDSETETPSGEGKRIMT
LARLRESFSLHQTTESNFRSPKKVKQQHSSPRQMSLDSTLSTVKTQKAVLSKEPESCRNM
DSKMSIPSRYLRKLEDNADSGFCSTSESDAGCSTPEAGSCVNSESVINLPEEEFCSSEEQ
LQNECLKTVECSEKSLECDVRVLGTEHKLNQVNDWTNQNKLSQEDNSSSPRVKCFKSRSF
KNEAEDFKAGKCPEVKNTGNYMPSVDVLVEVKKKTVPLEFSMKVLAEKVKKVIQQQQKST
ETQNYRRFKAKISPGENKVAEDELRKEISKEMFAEMEXHWPVQFRVYNSKVESDLFIIDQ
HATDEKYNFEMLQQHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFVINENGP
VTQRVKLISLPTSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGT
ALSVPEMRRLVTHMGEIEHPWNCPHGRPTMRHIVSLDLISPE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgctccgggaggcggctggcacctgcagcccgccagagccatcgggcccatc
gaccgcaaggccgtccatcgcatctgctcgggacaggtcgtgctgagcctgggcacggcc
gtgaaggagttggtggaaaacagcctggatgctggggcgaccaacattgatataaagctt
aaagatcatggagcagaactgatagaggtttcagataatggaggtggagtggaagaggaa
aactttgaaggcttgactctgaaacattatacgtcaaagatacaagatttttctgatcta
acacatgttgaaacatttgggtttcgaggtgaagctctgagttcactgtgtgcgttaagt
gatgttaccatttttacctgtcacaagtctgcaaaggttgggactcgtttggtgtttgat
cacaatggtaaaattactcagaaaactccttttccacgacaacaaggaacaactgttaat
atacagcagttattttatactttgccggtgcggcataaggaatttcaaagaaacattaaa
aaggtaggaatatgcaaaaatggtnccaggtattgcaggcatactgtcttgtttcaanaa
ggagtgcggattaactgcactaatcaagttggccaagggaaaaaaagctctgtgatatcc
actgctggaagtcctagtttaaaggaaaacattggagcagtatttgggcaaaaacagttg
cagagcctcagtccttttgttcagctacctcccagtgaagctgtttgtgaagaatatgga
ctcaacgcttctgaagtgccacaaaatctttatagtattacaggcttcatttctcgttgt
gatcatggtgttggaaggagtacaacagacagacagtttttctttatcaaccaacgtcca
tgtgatccagcaaaggttgtcaagcttgtgaatgaagtttatcacttacacaataagcac
cagtatccgtttgtggtccttaacatttgtgtagattctgagtgtgttgacatcaatgta
actccagacaaaagacaaattttacttcaggaggaaaagcttttattagcaattttaaaa
acttctctgactgagatgtttggtagtgatgttaacaaactgaacataaatcagaaactt
ctggacattgcaggcaacttgaagaaggcacttcctaaagagacagaaaagcctcatgta
gaaatgatgcccgactctgagactgaaactccaagtggtgaaggaaaaagaataatgact
cttgccagattaagggagtcattctctctccatcaaacgacagagagtaattttcgaagc
cctaaaaaggtaaaacagcagcacagctcccctagacaaatgtcacttgatagcactttg
agtactgtaaagactcaaaaagctgtcttgagtaaggagcctgagagttgtcgtaacatg
gactcaaagatgtcaattccaagcagatatctgagaaaattagaagataatgcagattct
ggtttctgtagcacttctgagtcagatgctggatgtagcacaccagaagctgggagctgc
gtcaacagtgaaagtgtaattaatcttcctgaagaagaattctgtagctcagaagaacaa
cttcaaaatgaatgtcttaaaactgttgaatgtagtgagaaatcactggaatgtgatgtt
cgggtcttgggtactgaacataagttaaatcaagtgaatgactggactaatcaaaataag
ttatctcaagaagacaatagttcttccccaagagtaaaatgttttaaaagcagaagcttt
aaaaatgaagcagaagacttcaaggcaggtaaatgtcctgaagtgaagaatactgggaac
tatatgccaagtgttgatgtactggtggaagttaaaaagaaaactgtgccacttgaattc
tctatgaaggttttagcagaaaaggtaaaaaaggtaatacagcaacaacagaaaagtaca
gaaacacaaaattacagaagatttaaagcaaaaattagtcctggagaaaataaagtagca
gaagatgaattaagaaaagagatcagtaaagaaatgtttgcagaaatggaanatcattgg
ccagttcaatttagggtttataatagcaaagttgaatctgatcttttcataattgaccaa
catgctactgatgagaaatacaactttgagatgttgcaacaacacaccgttcttcaaggt
cagaagctgatagtgcctcaaaatctcaatttaacagctgtaaatgaaactgtattgatt
gaaaacctggaaatattcagaaaaaatgggtttgattttgtcataaatgaaaatggtcct
gtaactcaaagagttaaattaatatcgttgccaacaagcaaaaactggacttttggtcca
caagacatagatgagctgatcttcatgctaagtgactgccctggagtcatgtgtaggccc
tccagggtcagacagatgtttgcttctcgagcttgcagaaagtctgtgatgatcggaaca
gcactgagcgtgccggaaatgagaaggctggtcacccatatgggggagatcgagcacccc
tggaactgcccccatggacggcccaccatgagacacatagtcagtttagacttgatttca
ccagaataa
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