Opisthocomus hoazin (hoatzin): 104329243
Help
Entry
104329243 CDS
T08436
Symbol
DHX15
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104329243 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oha03041
]
104329243 (DHX15)
03009 Ribosome biogenesis [BR:
oha03009
]
104329243 (DHX15)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104329243 (DHX15)
Spliceosome [BR:
oha03041
]
Complex A
U2 snRNP components
U2 related factors
104329243 (DHX15)
Complex B
104329243 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104329243 (DHX15)
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
90S particles
Helicases
104329243 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
104329243
NCBI-ProteinID:
XP_009932645
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
TLYLNIQTSHFLLYLLTHFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLRPTS
NSSYYAAAGLPTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRH
QSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCDYNCSNEVPSIWAFVLGPYQPCLVPQCFVRPTEAKKAADEAKMRFAHIDGDHLT
LLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYY
INIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNY
IRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
actctgtatttaaatattcaaacatctcattttctgctgtatctcttaactcattttagg
aaagatcgtgaccgggacagggaccgtgatgatcgttctaaagatcgcgacagggatcgt
gacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcgacctacatct
aactcttcgtattatgcggctgctgggttaccaactataaaaccagcaatgattccacac
agtattaaccctttcacaaatctgccacatacaccacgatattatgacatcctgaaaaaa
aggctacaacttcctgtttgggaatataaagaaagatttacagatattttgattaggcat
cagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatccctcagtgg
tgtgttgactacatgcgctcattacctggaccaaagaggggagtagcatgtactcagcct
aggagagtagctgcaatgagtgtggcacagcgggttgctgatgagatggatgtcatgctg
ggccaggaggttggttactcaattcgatttgaagactgcagtagtgcaaaaaccattttg
aagtatatgactgatggcatgttacttcgtgaagcaatgaatgatcctttgctggagcgc
tatggtgttataattcttgatgaggcccatgagagaacactggctactgatattttgatg
ggagttttgaaagaagttgtaagacaaagatctgatttgaaggttattgttatgagtgcc
actttagatgctggcaagtttcagatctattttgataactgtcctcttctaactatccct
ggtcgaacccatcctgtggagatattttatactccagaaccagaaagagactacctagag
gctgccattcgaacagtgatccaaattcacatgtgtgaagaagaagaaggagacctctta
ctctttcttactggacaggaggagattgatgaagcctgcaagaggataaaacgtgaaatt
gatgatttaggccctgaagttggtgatatcaaaatcattccattgtattccacccttcct
ccgcagcaacagcaaaggatctttgaacctccaccaccaaaaaaacaaaatggagcaata
ggaagaaaggttgttgtgtccactaatattgctgagacgtcattaacaatagatggtgtt
gtatttgtgattgatcctggctttgcaaaacagaaggtatacaatcctcgtatcagagtg
gagtctctcttggtgactgcgattagtaaagcttctgctcagcagcgagctggccgtgct
ggtcgtactagaccaggcaagtgcttcaggctttatacggagaaggcttacaagactgaa
atgcaggacaacacgtacccagaaattttgaggtctaacttaggatctgtagtattgcaa
ctcaagaagcttggtatagatgatttggtgcactttgattttatggatcctccagctcct
gaaactctgatgagagccttagagcttttgaattatctggctgctttaaatgatgatgga
gacttgactgagttgggatccatgatggctgaatttccgttggacccgcagctggctaaa
atggttatcgcaagttgtgactacaactgttctaatgaggtcccatcgatatgggcgttt
gtgttgggcccataccaaccttgtttagtcccacagtgttttgttcgccccacggaagca
aagaaagcagcagatgaagccaagatgaggtttgcccacatagatggagatcatttgacg
ttgctgaatgtctaccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgac
aacttcattaactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacga
atcatggatagatttaatttgcctcgtagaagcacagactttaccagccgagactattac
atcaacataagaaaggcattagttaccgggtatttcatgcaggtggcacacttggaacga
acggggcattacttaacagtaaaggataaccaggtggtgcagttgcatccctccactgtt
cttgatcataaaccagagtgggtgctctacaatgagtttgtccttacgacaaagaactac
atccggacatgtacagacatcaagccagaatggctggtgaaaattgcccctcaatattat
gacatgagcaattttccacagtgtgaagcaaagagacagttggatcgcatcattgccaaa
cttcagtccaaggaatactcacagtactga
DBGET
integrated database retrieval system
