Opisthocomus hoazin (hoatzin): 104329358
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Entry
104329358 CDS
T08436
Symbol
FREM1
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104329358 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oha04091
]
104329358 (FREM1)
Lectins [BR:
oha04091
]
C-Type lectins
Lecticans
104329358 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Motif
Other DBs
NCBI-GeneID:
104329358
NCBI-ProteinID:
XP_009932773
LinkDB
All DBs
Position
Unknown
AA seq
1811 aa
AA seq
DB search
MKPFEKIWLFLLLPVVLRVACSSFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVTNEPITQRVGKLTPQVFDCHFLPNEVRYTHNGCPILDEDTVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSRALEVPECYGLSRVIDKNVLTFDYDRKINLDCTISIVSSETH
LPAHGQLITGEVQQEQLRGDQPQSFFPDHKHSVGQQCRNGSCVLGLSIVHNMKMSCEEFL
RVGIRYQHLGPPSPDTDYIAVRLDLTDTRSKTLHKTEYAWLPVQIKGAIPNQTPKAALMA
KFILEVDQFILTPFTTTTIDAEDNETPKSLLVFNITKSPPWGFITHLSDHTKAVCSFTWK
DLSDTLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPITVRLSIRTTDTNAPRVSWNTG
LSLLEGQSRPITWQHFQIVDNDGIQNVRLVITDGLQHGQLTVRGGKGFMFTVFDIQAGVV
QYHHDDSDSTKDFVVFRIFDGLHSIRHKFPINILPKDDSPPFLISNVVIEVQEGQAILIQ
GSMLHASDMDSSDAYILFNITKPPQAGEIMKKPGPNLIGYSVSSFLQRDLFNGIIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDNQLPREAPGVTRHLVVKETEIAHL
TKKHLHFIDVEEQERELTYTITTAPFFSCMHDHSDAGRLFMVDTIPKLVKDPAALALRSF
TQHAVNYMKVAYMPPLQDIGPEAQQVHFIFSVSNQHGGTLYGICFNITILPVDNQAPEVF
TSHLQVEEGGLRPVTEGHILISDVDTKREHLLLLLQRQPQHGAVELDGVPMKEGDRLSCG
DLRTLAVRYRHDGSETLTDDVLFAATDGIHFVEFILQVKVLPVNDEPPIMQTGLVPVLHC
LEGEEVVLSSAYINATDADSDDMKLMFMLARQPYHGVVRKAGIAVDRFSQADVTSGFITY
KHTSGEIGLTPSTEILTFVVSDGEAGLDVKDCCYGGPLPPPVPLRDPFPVYDLNITVFPV
DNQPPSIATGARFVVEEGSSAPLTTNHLFATDPDTTADDLEFVLVSPPQFGYIENILPSP
GFEKSNMGISIASFQLKHLKALSVNYVQARHVRMEPTADHFVLYVTDGLHRSAETPFFVL
INPTNDEVPEFVARNITVHEGEMKELDLSVINAVDLDVPQDHLVFGVVQRPWHGFLINGV
HGNDIQHYQHLINHDHNSHGLLVHDFSMELLKQGMKLMYMHDNSENLTDSFKIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKNDIELNMGETRIISSAVLSAEDKDTPRGRIYYLFERL
PENGQLQLKVRQGWMTLQTGMKCTQEELDMNLVRYVHTGAIGTNKQDSFTFYLWDGYNRS
PAVDFYINIKDMEKGDIAVFIRPLGMPKGHRGYITTDVLLAVDGTDKPEELLYVITSPPQ
YGKIEYVSYPGIPITSFSQMDVARQIVCYVQNTKEVVPEDMFRFTISNGLRTKHETFMIF
LEAVDQALPTLSRNTALRLVEGTTALLSPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYR
GAVILQYNFTQQDVDNRDVAYKHRGGDSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTI
QVDHLDKMAPKIIRLHCFSDVELLKNGNYGIYITARSLKASDPNTEDDKIIFKILRGPHY
GXLENITTGGFIQERFSQKDLNSKIILYVINPSCEVNSDSLEIQVTDASGNSAVPHRLEL
RWSRIEMQQTEYEVCESVGVVPLKITRTGHTAESAFIAVKVNEISAVLGKDFTVTPSKLV
QFDPGMKQYTE
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaatctggttgtttctactgctgcctgttgtactaagagttgcc
tgctcctcctttattagtgtcaaccttggggtgaaagtgatgaagggtcagtctgtcttc
ctgtcagaagatgacctcaagttctccatccccagagagaaggatgtctgcaaagtagaa
gttgtgactaatgaaccaataacacaaagggttgggaaactaactccacaggtttttgac
tgtcacttccttcctaatgaagtcagatacacccacaatggctgtccgattttagatgaa
gacacagtcatgcttaggctgtacaggtttacagaaactgaaacgtttgtggaaacattc
accctccatgtgcagttacttgagccagactgtaacatcatcaaaatgcgctcccgtgcc
ctggaggtccctgagtgctatggtctgtccagggtgattgacaagaacgtcctcactttt
gactatgacaggaagataaatctggattgcaccatttccatagtgtcttcggagacccac
ctgcctgctcatggccagctaatcaccggggaagtgcagcaagagcagcttcgtggagat
cagccacagagtttcttccctgaccataagcacagcgtgggccagcagtgcaggaatggg
agctgcgtgctgggactgagcatcgttcacaacatgaaaatgagctgcgaagaatttctg
agagtggggattcgatatcaacaccttggccctccctcgcctgacaccgattatattgct
gtgaggctggatctcacagataccagaagcaaaactctgcacaagactgagtatgcatgg
ctccctgttcagattaaaggcgctattcccaatcaaacacctaaagctgccctgatggca
aagttcatcctggaagtagatcaatttattttaaccccctttacaaccacaaccattgat
gctgaagacaatgaaactccaaagtccctgcttgtattcaacattaccaagtcacctcca
tggggcttcatcactcatctatctgaccatacaaaagctgtttgctcctttacgtggaaa
gatctcagtgacacgctcattgcttatcagcctccaaataacagccacacagaaaggagg
aattatgaggtggagtttgaggttcatgacttctactttgaaaggagtttgccgatcact
gtgcgtctttctatcagaacaacagatacaaatgctcctcgagtttcatggaatacaggt
ctcagcctcctggaagggcaatcccgccccatcacatggcagcactttcaaatcgtagac
aacgatggcatccagaatgttcgcctggtcataactgatggcttacagcacgggcagctc
actgtgagaggagggaaaggattcatgttcacagtgtttgatattcaggctggagttgtt
caataccatcatgatgacagtgattctactaaggactttgtggtgtttaggattttcgat
ggcctccacagtattcgccataagtttccaatcaatattctccctaaagatgacagtcct
ccatttcttatcagcaatgtggtcattgaagttcaagagggacaggcgattctgattcag
ggctccatgcttcatgcttctgatatggattctagtgatgcttacatactattcaatatt
accaagccaccacaggccggagaaatcatgaagaaaccaggaccaaacttgatagggtat
tctgtcagcagttttcttcagagggatctatttaatggaataatttattatcatcatttg
ggaggagaagtgtttgaagattcccttgagtttgtgctgtgtgatagtcatgaccctccc
aatctctcagagccacaggtgatgatggtgcacattatccctgtggacaatcagctgccc
agagaagccccaggagtgacccgtcacctggttgttaaggagactgagattgctcacctg
actaagaaacatctccacttcatagacgtggaagagcaagaaagggaactcacatacacc
ataaccactgccccatttttctcttgcatgcacgaccactccgacgctggaaggctgttt
atggtggacaccatccccaagctggtcaaggatcctgctgctcttgcactgcggtcattt
actcagcatgctgtgaactatatgaaagttgcctacatgccaccgctgcaggacatcggg
cctgaagctcagcaagtgcattttattttttccgtcagcaatcagcatggtggcactttg
tatgggatctgcttcaatatcacaattcttcctgtggacaatcaagccccagaggttttt
acaagccatttgcaagtggaagagggtggcctgaggcctgtcacagagggacacattctc
atctctgatgtggacaccaagcgggagcatctcctcctcctcctgcagagacagcctcag
catggggcggtggagctggatggcgttccaatgaaggaaggtgacaggctttcctgtggg
gacctgcgtaccctggcagtcaggtatcggcatgacggctctgagactctcactgatgat
gttctctttgcagccacagatggcatccactttgtagagttcatcctgcaggtcaaggtg
ttgcctgtgaatgacgagccacctattatgcaaacaggccttgttcctgtgctccactgc
ctggaaggtgaagaagtggtcctctcctcggcgtacattaatgccacagatgcagacagt
gatgacatgaaactgatgtttatgctggctcgccagccctaccacggggtggtgaggaaa
gctggcattgctgtggatcgtttctcccaagctgatgtcacctctggtttcatcacatat
aagcatactagtggggagattggcctgactccttccactgagatcttaacctttgttgtc
tctgatggtgaggccggcctagatgtgaaagactgctgttatggtggacctctccctcct
ccagttcctcttcgtgatccgtttccagtatatgaccttaacatcactgtatttccagtg
gataaccagcctccatcaatcgcaactggtgcaaggtttgtggtggaggagggctcctca
gcaccccttaccaccaaccatttgtttgccactgaccctgacaccactgcagatgactta
gagtttgtcttggtttctcctccccagtttggttacattgaaaacatactgccttctcct
gggtttgagaagagcaacatgggtataagtatagcttcatttcagctgaagcacctgaaa
gccctgagcgtaaactatgtacaagccaggcatgtgcgaatggagccaacagcagaccac
tttgtactttatgtcaccgacgggctgcatcgctcagcagagactccatttttcgtgctg
atcaacccaaccaatgacgaagtcccagagttcgtagcaaggaatattactgttcatgag
ggggagatgaaagagctggatctctctgttatcaacgcagttgatctggatgtgcctcaa
gaccatttggtatttggggttgtgcagaggccctggcacggattccttattaatggagtt
catggcaatgatattcaacactatcaacacttgattaaccatgaccacaacagccatggg
ttgcttgttcatgacttttccatggagctactgaagcagggaatgaagctgatgtacatg
catgacaattcggaaaacctcactgacagctttaaaattcagctatcagatgggaaacat
aaagtcctcagaaccatttcggtaaaggtcattccagttaatgatgagaaaccggtgcta
agcaagaagaatgatatagagctgaacatgggtgaaacgcgaataatttctagtgctgtt
ctgtcagcggaagataaagatacccccagggggagaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtacgccaaggttggatgactctccaaactgga
atgaaatgcactcaggaagaactggatatgaaccttgtgagatatgttcatacaggagct
atagggaccaataagcaagacagcttcacattttatctgtgggatgggtacaacagatct
ccagctgtggatttctacataaatattaaggacatggaaaagggagacattgctgttttc
ataagacctcttggaatgccaaaagggcatcggggctacattacaactgatgtcctcctt
gcagtggatggcactgacaagccagaggagctcctctatgtgataacctccccaccccag
tacggaaaaatagagtatgtcagctatcctggcatccccatcacaagcttcagtcaaatg
gatgtagcaaggcagatagtctgctatgttcagaacactaaggaagttgttcctgaagat
atgttcagattcaccatcagcaatggactgaggactaagcatgagacattcatgatcttc
ttggaggcagtcgaccaagctttgcccacactatctaggaacacggcgttaagattagtg
gaaggcactacagcactcctttctcctgacgtcctgcagctttcagacccagacactgcc
aaagaaaaccttaccttcctcttggctcagctcccccaatatggtcatctctattatcga
ggggctgtgatactgcagtacaatttcacccagcaagatgtggacaacagggatgttgca
tacaagcaccgaggtggggattcccagattgacagatttacatttgttgcaacagatagg
actaatcaaggcttcatcgtgaatgggagggtgcagagcgagccagtggcgttcaccatt
caggtggatcatttggacaaaatggcaccaaaaattattcgcctccattgcttttctgat
gtggaactgctgaagaatggcaattatggaatctatattactgccaggtccctgaaggca
tctgatcccaatacagaagacgacaaaataatttttaagattttacgaggtcctcattat
ggctaactggaaaatataacaacaggtggatttattcaggaaaggtttagccaaaaggat
ttaaacagcaaaatcatactttacgtcatcaacccctcgtgcgaagtgaattcagacagc
ctggagattcaagtcacagatgccagcggaaactcagcggtgccccacaggctggagctg
cggtggtctcggattgaaatgcaacagaccgagtatgaagtgtgtgaaagcgtgggagtg
gtgcctctgaaaatcaccaggacaggacacactgcagagtccgcttttattgcagtgaag
gtcaacgaaatctctgctgtgctgggaaaggactttacagtgactccttccaagcttgtt
cagtttgatccaggtatgaagcagtacactgaataa
DBGET
integrated database retrieval system
