Opisthocomus hoazin (hoatzin): 104329515
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Entry
104329515 CDS
T08436
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oha03016
]
104329515 (TRUB1)
Enzymes [BR:
oha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104329515 (TRUB1)
Transfer RNA biogenesis [BR:
oha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104329515 (TRUB1)
Prokaryotic type
104329515 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
104329515
NCBI-ProteinID:
XP_009932943
LinkDB
All DBs
Position
Unknown
AA seq
251 aa
AA seq
DB search
MATSTRESTLAAYEAGVQTNGNKRNQVLKIGHGGTLDSAAAGVLVVGIGRGTKMLRTMLA
GSKKYTAIGLLGKATDTLDATGRVTEEKPYEQITKGDLENVLQKFTGEIMQVPPLYSALK
KDGERLSTLMKRGEAVEAKPARPVRVYSLSLQQFQPPLFTLDVECGGGFYVRSLVSDIGK
ELSTCATMQELTRTKQGPFTLEEHALYEDKWTIDEIARSLEHCMSLLPGEPSHKKLKTEH
PGETAVSCEDK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggccaccagtaccagggaatccacccttgcagcttatgaagctggtgtgcaaacaaac
ggaaataaaagaaaccaggttttgaaaattggacatggtgggactttggacagcgcagcg
gcaggagttctggtggttggtattggaagaggaacaaaaatgctgagaactatgttggca
ggttccaagaagtacactgccattggactattaggcaaagctactgatacgttggatgct
acaggaagagtaactgaagaaaaaccttatgaacagataacaaaaggagatcttgaaaat
gtgctgcaaaagttcacaggggagataatgcaggttcctccactctattctgctttgaag
aaggatggagagaggctatcaaccctgatgaagagaggagaagcagtcgaagcaaagcct
gctcggccagtgagagtgtacagcctctctctccaacagttccagccaccactgttcaca
ctggatgttgaatgtggtggtggcttttatgtcaggagcctggtcagtgacattggcaaa
gaactgtctacctgtgccactatgcaagagctgacccgaaccaaacaggggccatttacg
ctagaggagcatgccctttatgaagacaaatggacaattgatgaaattgcacgatcctta
gagcactgcatgtctcttctcccaggagagccatctcataaaaaattgaagacagagcat
cctggcgaaactgctgtgagctgtgaagataagtga
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