Opisthocomus hoazin (hoatzin): 104329593
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Entry
104329593 CDS
T08436
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03013
Nucleocytoplasmic transport
oha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104329593 (UPF3B)
03015 mRNA surveillance pathway
104329593 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104329593 (UPF3B)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104329593 (UPF3B)
mRNA cycle factors
P-body specific factors
104329593 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104329593
NCBI-ProteinID:
XP_009933027
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MPMEPMHAHAAVPPPLAKAEAITDGGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDP
EYKKFLESYSADDEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREER
RRRELERKRQREEERRKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEK
DEKDLEKKEKSKKLEKETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDF
ERDREYERAQREKLRRQEEERRRQKERFEKEKVFRRKEEDMKKERDLLREKGKKSDLTDF
TSSTDKSEKVTKDDKKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKPTEQG
AEKKQESETSNAKEEE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggagccaatgcacgcgcacgcagcggtgcccccgccgctggccaaggccgag
gccatcaccgatggtggtcaggaatacgctgccatagttgagtttgcacctttccaaaaa
gctgcgaaaaagaagagtaagaaaaaggatgccaaaactggaacaatcgaagatgatcca
gagtacaagaagtttttggaaagttacagtgcagatgatgaaaaattaacctccactcct
gaaactctgttggaggaaatagaggcaagaaacaaagagctaatagctaaaaagactact
cctttattgaacttcttgaaaaataaacagagactgagagaagaaaaaagagaggagagg
aggaggagagaattggaaagaaaaagacaaagagaagaagaaagaagaaaatggaaagag
gaggagagaaggaagagaaaagaagcagaaaaactgaagaaggtagacagatgcccagaa
aaagaaagagacagatcaaaagaagagccaaagattaagctacttaagaagcctgaaaaa
gatgaaaaagacttggagaaaaaagaaaaatccaagaaactggaaaaagagactctgagg
gaggaaaaaaatgcgagtagtgcatctgccaaacgatctgatggggagacaaaagaagag
aaggcaaaaaaatcagaagatgagtgtgtaaaggactacagggaccgagatagagatttt
gaaagagacagagaatatgagagagcacagagggagaaactgaggcgccaagaggaggag
cgtcggaggcagaaagagcgctttgagaaagagaaggtttttagaagaaaagaggaagat
atgaaaaaggagagagacttactcagagaaaagggaaagaaaagtgatcttacagacttt
accagcagcacggacaaatctgagaaagtaaccaaagacgataaaaaagaggacacaatt
aagagggatcgtatcagaaacaaggatcgtccagcaatgcagctgtaccagcccggagcc
cgaagccgaagcagactgtgtcagtacgaagacagtgctgcgaagcccacggagcaggga
gcggagaagaaacaggagagtgagaccagtaacgcgaaggaagaggagtga
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