Opisthocomus hoazin (hoatzin): 104329668 Help Entry 104329668         CDS       T08436                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism oha  Opisthocomus hoazin (hoatzin) Brite KEGG Orthology (KO) [BR:oha00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:oha03021]     104329668 (SETX) Enzymes [BR:oha01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      104329668 (SETX)     5.6.2.5  RNA 5'-3' helicase      104329668 (SETX) Transcription machinery [BR:oha03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104329668 (SETX) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 UvrD-helicase AAA_22 ZIP4_domain AAA_16 ResIII SLFN-g3_helicase RNA_helicase UvrD_C_2 Motif Other DBs NCBI-GeneID:  104329668 NCBI-ProteinID:  XP_009933118 LinkDB All DBs Position Unknown AA seq 2817 aa AA seqDB search MSTCRWCTPSGSDTTEFLQSYASQQLSPEDFEGSSDDLCYCLECVVEYHKAREKLPSLHE VLWELETSRLVAHIEKSMREEAGEEDELFIVDENGETRLSGYVGLDFENNLRVLLLEILK YPYLLLHEKVSQLCVEVLCRMEQSHNSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYSSSMIEKGKLILLPSHLYDTANYKNYWL GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEAADDSTDPFWPALQCFMVILDQ LGSKVWGQLIDPVQAFQTIINSVSYNSEIKNIRSSFKRTKSEPESDYNDDMATCSQIVYN YNTEKPQKDTGWKTAICPDYCPNLYEDMQTLAHVLQSDIGRDMRVHDSTFLWFIPFVQSL MDLKDLGVAYIVEVIHYLCLEIKDTLSERIQQCDKISEFFLLILVSIIELHRNKKCLHLL WISSQEWVEAVVRCAKLPAIAFTRCTEKASGHGVRGSSAVSLQASNSVQHACVQLIRSLL KEGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLNIQETQELQTCLRQVIRSIKDRALSTP VPIGNNATLPTVSIKQEKSAHGDGCKMSVHGRDDLRSPFAVTSKEGGDENCQENSFPSRR SAWEEECRDASKSSRLWMFTEGPLMNIKKEFDDLTTQEYVCPQNSLVTKVCGKVQENRNN DLVAGKSDMGNQYFNPNAQHSDFRKGIELENNCEAGPITPTRLAAQTHIGSPEHVYSSDV KESNMFPSLSSELKVDAHKLMDLKNKIQKTEWPSKVLRSVKPHDLKNCSLATSASKAEAE QPRFCTGHVCASKDCHKPQGVNTVCANEISADTPRSCESMQKKSANSAFQSRLVPTKQVS KEAPLDCSSSSKNEPGIHENEDDSILLSGICDTLPKKVSTEERSSSLLKWVFKKDADMQI SDREQPNLNDLVKYDCKGQISKTLCMDKASANGCIPSSSENKRNISNPASQIRPLSVTCE SGDRLFKFSEYFKRESSSVGKKEEDLVKIVSEDNTLTNSQVDRELSKLSLAAYAKSVNFP FDSSQESSVHHNICDIKRKVKGAVRSSSDGQSTKSSCDADCLDNQVIVILDSDEEKDVVD KEETKNLNENMRSEEQPSTSSCISDSDIKKESKTPSSPLSLEDCESQYFEFETDVDVFSV WQDTQAYSMEATQEYKQDRVSASVSSSNSDGLLNDHMNEWGYDVDYISDDAMEEEANLIE KQTENISHQKAADNTKEVTDSTLQEPVSKESVKDQLENFADEGTVAKDITLDSKLTEPRA STSNISLASKLARKKNSASPRKNTAKSKVARTIQRSPKKPLVLKTAQNKKLLQNTSKNSQ PGRSVPAVVPPRKVRQCPAPASTVEKLGLKKAPRKAFELSQRSLESLAQLRSYGKAAGRV GVAQKQKSKLIAPQSLSVKYNKKLLACQDLAYLRQTRPKKSARVKNLGGNSESRNKTVSK VDAKSVKQKPESFELASVENQRWKKREETVGPSTSERKFESCFVEEETCLSKMPSSSDLN RKSENNSMMIPPVHMDSSLSSAALVGDEKDEPSGKGCVVQPQCEKATSKDNGCKPNENSE DDDDLFLTQSDPVDMELCSEEESVQDTTLASKKKEEVDTAESPQQNGSLTIVKCKYKHCV EKVEKPGEYCSKHSATSSEADHLFAKPSLLPPSKTRKPCTTKIFSSASSSRNAAFSKDLE DVKKLPPASRSKVNAAKPAVVRPPNAKAVPIGNQTSKSPSFSNVPQPHISNYVLQPQNRQ NNNATHISRRPPQEVYSSFVGAQQRDHSIFVNEVLKWSYDMFAKSVQFGPPSNLMQSVVA SVPVQFQGYNDYFNTFLPLMMLNAFETLAQEWIENQRVREKSYYFGLQNFSADLNAAEFR AHFRESDLARQLHPKEDDLIFLVVQKKKDAFREESEMEDRKVKHVGLVTRFSRASGCLTR QKEQHTVCHLSVQTRGNLSFFINKQVKCVVVGSLVTTHRTFKGLLLLSRSPLAKPIINPS YSDFCPRDLPVAAESAASDMNEYNKDQKRAIETAYAMIKQHPGLPKICLIHGPPGTGKSK TIVGLLSRVLRENTRNQKATPKTNTKIKTNRFLVCAPSNAAVDELMKKIIVAFKEKCQNR QEPLGNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADCDQDIQKRKAALDQQL DMLSRQRAMHRCEKRESQMLDNEIGRLSKERQQLASQSKEVRGHSQKVQADIILESDIIC CTLSTSGGGLLESAFSRQRLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLP PTVKSVKAQEYGYDQSLMARLHRHLEDQVQKNVLRSLPVVQLTVQYRMHPDICLFPSNYV YHRTLKTDKATEESRCSSEWPFQPYLIFDVGDGREERDNDSFSNPQEVKLVMELIRTIKE KRKDLGLRRIGIITPYSAQKKKIQEQLERAFKNNSPGEVDTVDAFQGREKDCVIVTCVRA NSTKGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQRRGAIIKTSE KSYSKDALKILKLKSMVQHPVQAGTKNSPLVQAASSSSKRGELANPREAISPREQAAGTG HALPQGSRGPQQAERAQAADSKRVSASAPVEAAALAADQEKPRDPRLASMASRTETKRKE QASKDSDRLAQSNRQSASQQSLSGSSAAGDQVSRTETSKKPQPTTGQCDVPSMSPYAARQ EGDWRASASKSGLKARSDGGRSNSSNWSKDDRVLTRRTEESPDNRDSNSAKRRKTSH NT seq 8454 nt NT seq  +upstreamnt  +downstreamnt atgagcacatgccgatggtgtacgcctagtggttctgacaccactgagttcctgcagagc tatgcttctcaacagttgtccccggaagattttgaaggatccagcgatgatctctgttac tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaagtttgcatgag gtcttgtgggagttggaaacctcccgtcttgttgcccacatagagaaatccatgcgagaa gaagctggagaagaagatgagttgttcatagtggatgagaatggagagacacggctgtct ggttatgtgggcctggattttgagaataacctgcgagtgctccttctagaaatactgaaa tacccgtatctgctgctgcacgagaaagtcagtcagctgtgtgtagaagtgctctgtaga atggaacaaagtcacaactcctttcaggtctttgagaaatatccaggaatatatctcttt ttggtacacccgaatgaagtgattcgtcggtgggccatcctaacagcgaggaatttgggg aaggttgacagggatgattactatgacttacaggaagtgctgacttgcttgttcaaagtt attgagttggggctttttgagagtccagatatttacagctcttcaatgattgaaaagggt aaacttatccttctgccatctcatttatatgatactgccaactacaagaactattggcta gggatttgtatgttgctgacagtgctggaagaacaagctatggactccttgttactgggc ccagacaaacaaaatgatttcatgcagtctatacttcacaccatggagaaagaagcagct gatgattctactgaccccttctggccagcgctgcagtgtttcatggttattttggatcag ctcggatctaaagtatggggtcagcttattgatcctgtccaagccttccaaaccattatc aacagtgtgagctacaacagtgaaataaaaaatatacgcagtagctttaagaggacaaaa tctgaaccggagtcagactacaatgatgatatggctacttgcagtcagattgtgtacaat tacaatacggaaaagcctcaaaaggataccggatggaagactgccatttgtccagactac tgccccaacctgtatgaagatatgcaaacactggctcatgtgcttcagtctgatattggc agagatatgcgtgtccatgacagcacgtttctgtggttcatcccttttgttcagtcgctc atggatctcaaggacttgggtgtagcgtatatagtagaggtcattcactacctctgcttg gaaatcaaagatactctcagtgaaagaatccagcagtgtgacaaaatctctgaatttttt ctcctgatcttggtgtcgattattgaactgcacagaaacaaaaagtgcctgcatttgcta tggataagctcccaagaatgggtggaagcagtggtgagatgtgctaagcttccagctata gcatttacacggtgcactgaaaaagcatctggacacggtgtgagaggttcatcagcagta tctttacaagcttctaactctgtgcagcatgcctgtgtgcagttgatacgcagccttctc aaagaaggctatcaaattgggcagcatgctctttgcaagcaatacctggacaaactcaat cttcttctgcgaggaaatctgtctttaggttggcagctgaacatccaggaaacccaggag ttacaaacatgtttaaggcaagttataagaagtataaaggacagagcattgagtactcct gtgcctataggaaacaatgcaactttgcctaccgtttctataaagcaagagaagagtgca catggtgatggatgcaagatgagcgtacatggcagagatgaccttcgctcaccatttgct gtcacatcgaaggaaggcggagatgaaaactgtcaagagaactctttccctagcaggagg agtgcctgggaagaggaatgtagagatgcatctaaaagttcaaggctttggatgttcaca gaaggccccttgatgaatattaaaaaggaatttgatgacttgactactcaggaatatgtc tgcccgcagaactctttggtaacaaaagtatgtgggaaagttcaggaaaataggaacaat gatcttgtggcagggaaaagtgatatgggtaatcagtactttaatccaaatgcccagcat tcagatttcagaaaaggcatagagttggaaaacaactgtgaagctggacccataacaccc acgcgtctggctgctcaaactcatattggttctccagaacatgtttacagctcagatgta aaggaaagcaatatgtttcccagtttgtcttcagagcttaaagtagatgcgcacaaactc atggatttgaaaaacaagatacagaaaactgaatggccctcaaaagtattgcggtcagtg aagccacacgacttgaaaaactgcagtttagcaacaagtgcttcaaaagcagaggcagaa caacctaggttttgcactggccatgtgtgtgcgagcaaggattgtcataaacctcaggga gtgaatactgtgtgtgcaaatgagatctctgctgatactccaaggagttgtgaaagtatg cagaagaaaagtgcaaacagtgcttttcaatccagactggtccccactaaacaggtgtca aaagaagcaccactagattgctctagctcctctaaaaatgaacctggtatacacgaaaat gaagatgacagtattttgctttcggggatttgtgacaccttaccgaaaaaagtatccact gaagaacgatcaagttcattgttgaagtgggtgtttaagaaagatgctgacatgcagatt tcagaccgggaacagcctaatttgaatgacttggttaaatatgactgtaaaggtcaaatt tcaaagacactctgtatggataaagcttcagcaaatggttgtattccatctagctctgaa aacaagaggaatatatccaaccctgcttctcagatcaggccactgtcagtgacgtgtgaa tcaggtgacaggttgttcaaattttcagaatatttcaagagagaaagcagttcagtgggg aagaaagaggaggatttagtgaagattgtttctgaagataatactttaacaaactcccag gttgacagagaactcagtaaattatctttagctgcatatgccaaaagtgtcaatttccct tttgattcaagccaagaaagctcagtacatcataacatatgtgatattaaaaggaaagtg aaaggtgctgtaagatcttccagtgatggccaaagtaccaagtcttcctgtgatgcagat tgccttgacaatcaagtcattgtaattttagactctgatgaagaaaaagatgtggttgac aaggaggaaacaaaaaaccttaatgaaaatatgcgtagtgaagagcagccttcaacttcc agctgcatttctgatagtgatatcaaaaaagaatcaaagacaccaagctctcccttgtca cttgaagactgtgagtctcagtactttgaatttgaaacggacgttgatgtcttttcagtt tggcaagatactcaagcgtatagtatggaagcaactcaagagtataaacaagatcgtgtt tcagcatcggttagtagcagtaattcagatggcttactgaatgatcacatgaacgaatgg ggttatgatgtggattatataagtgatgatgcaatggaagaagaagcaaacttgatagaa aagcagacagaaaatatttctcatcagaaagcagctgataatacaaaagaagttactgat tcaacattgcaggaacctgttagtaaggaaagcgtgaaagatcagctggagaattttgca gatgaaggtactgttgctaaagacatcaccctggactcaaaattgactgaacccagggca tctacatctaacatctcattagcctcaaagttggcccgtaagaaaaatagtgcaagccct cggaagaatacggcaaaatctaaggtagcaagaactattcaaagaagtcctaaaaagcct cttgttcttaaaacagcacaaaataaaaagctacttcaaaatacatcaaaaaattctcaa cctggcaggtcagtgcctgctgtagttcctccaaggaaagttcggcaatgtcctgcacca gcatcaactgtagaaaaacttggtctgaagaaggcaccccgcaaagcgtttgaattatcc cagcgctctttagagagtctagctcaattgcgcagctatggtaaagctgcaggaagagtt ggagttgcacagaaacagaagagtaaactaattgctcctcagagtttgtctgtgaaatat aataaaaaactactagcttgccaagaccttgcgtatttaaggcagacaaggcccaaaaaa agtgccagagtgaagaatcttggaggaaattctgagagtagaaacaaaacagttagcaaa gtggatgcaaaatctgtgaaacaaaagcctgaaagttttgaacttgcatctgtggaaaat caaagatggaaaaaaagggaggagactgttggtccctctaccagtgagagaaaatttgaa agctgctttgtggaggaggagacatgtctctctaaaatgcctagttcttcagacctgaac agaaaatcagagaataacagtatgatgattcctcctgtacacatggattcaagtctctct tctgctgcacttgttggagatgagaaagatgaaccttcaggaaaaggttgcgttgtccag cctcagtgtgagaaggcgacttcaaaagacaatgggtgtaaaccaaatgaaaacagtgaa gatgacgatgatctatttttaactcagtcagatcctgtggatatggaattatgttcggag gaagaaagtgttcaagatactaccctagctagtaaaaaaaaggaggaagttgatactgct gaaagccctcagcagaatggatccttgactattgtgaaatgtaagtacaaacactgtgtg gaaaaagtggaaaaaccaggagagtactgtagtaagcattcggcaaccagctcagaagca gatcacttgtttgccaaaccttctctcctgccgccttctaaaacaagaaagccttgcact accaaaattttcagctcagcaagttcttcacggaatgcagccttcagcaaagatctggaa gatgttaaaaagctaccaccagcttcaagaagcaaagtgaatgcggcgaaaccggcagtg gtcaggccaccaaatgcgaaggctgtaccaataggaaatcaaacatccaagtctccaagt ttcagtaatgtacctcaaccccatatttctaattacgttctccagccacaaaatagacag aacaacaatgctacacatatttccagaaggcctccccaagaagtgtattcttcctttgtt ggcgctcagcagcgtgatcatagtatttttgttaatgaagtcctaaagtggagttacgac atgtttgcaaagtccgtccagtttggacctccaagtaacctcatgcagtctgtagtagct tctgttcctgtccaatttcagggatacaatgactattttaatacatttttacccttgatg atgctaaatgcctttgaaacactggcacaagagtggatagaaaaccagagagtaagagag aagagttactactttggcttacagaacttctctgctgacttgaatgcagcagaattcaga gctcattttcgagaaagtgatttggcaaggcagcttcatccaaaggaggatgacttaatc tttttggtggtccaaaagaaaaaagatgcctttagggaagaaagcgagatggaggaccgt aaggtgaaacatgttggtcttgtgacgcgattttctcgtgcatctggctgtttaaccaga caaaaggagcagcatacagtctgtcacctttctgtgcaaactcgaggcaatttgtcattc ttcataaataagcaagtgaagtgtgtggtggttggctctctggtgaccacacatcgaaca ttcaaaggtctactactactgagcaggagtcccctggctaaacccatcataaatccaagt tacagtgacttctgtcccagagatttgcccgtagcagcagaaagtgctgcatcagatatg aatgaatacaacaaagatcaaaagagagccattgagacagcttatgccatgataaagcaa catccagggcttcccaagatctgcctcatccatggaccacctggaacagggaaatcaaaa actattgttggacttctgtctcgtgttttgagagaaaacactcggaatcagaaggcaact ccaaaaacaaataccaagatcaagacaaaccgttttctagtttgtgcaccatcaaatgct gctgttgatgaactcatgaaaaagatcatcgttgcatttaaggaaaaatgtcaaaacaga caggagcctttgggaaattgtggtgatatcaaattagtgcgacttggtgctgaaaaagca atcaacagtgaagtccggggatttagcctggataagcaagttgaacacaggatgaagcga aagccagctgactgtgaccaggatattcagaagagaaaagcagctctcgatcaacagctg gacatgctgtctcgtcagcgtgccatgcacagatgtgagaagagggagagtcaaatgtta gataatgaaattggcagactgtcaaaggagagacaacagcttgcttctcagtcaaaggag gttcgggggcactctcagaaagtacaggcggatatcatcttggagtccgacattatctgc tgcacactgagcacaagtggaggaggtctgctggaatccgctttttcacggcaaagactt gatccattcagctgtgtcattgtggatgaggcagggcagtcctgtgaggttgaaacgctg attccactgatccatcgctgtaataaacttgtccttgttggagatcccaggcagctccct cctactgtaaaatcagtaaaagctcaggaatacggctacgatcagtccttgatggcacgc ctgcacagacacctggaggaccaagtgcagaagaatgttttacgaagcctgccagttgtg cagctgactgtgcagtacaggatgcaccctgacatctgcctcttcccatccaattacgtt tatcacaggactctaaagactgacaaagcaacagaagagagcagatgttcttcggaatgg ccattccagccctaccttatttttgatgtaggagacggtcgtgaggagcgagacaatgac tcttttagtaatcctcaggaagtgaaactggtgatggaattaattagaacaattaaagaa aaaaggaaggatctaggtcttcgtcgcattggaataattaccccttacagcgcacagaaa aagaaaattcaggaacaactggagagagcatttaagaataacagcccaggagaagtggac acagtggatgcattccagggacgagagaaagactgtgtcatagtgacgtgtgtccgggca aacagcacgaaagggtcaattgggttcctggcaagtcttcagcgtctcaatgttacaatt acacgagccagattcagcctcttcatccttggaaggctgaaaacgctcatggaaaataaa gactggaatgagttgattcaggatgctcagagaagaggtgccattatcaagacatcagaa aaaagctacagtaaagatgctctgaagattttgaagctcaagtcaatggtacagcaccca gtccaagcagggacaaagaactctcctctggtgcaggctgcttcttccagtagcaagagg ggtgagctcgcaaatccaagggaggccatcagcccccgggagcaggctgctggcaccggc catgcactgccccaaggaagcagagggccccagcaggcagagagggctcaggctgcagac tccaagagagtcagtgcctctgcacccgtggaggctgcggcgcttgctgctgatcaggag aaaccacgggacccaaggctggcaagtatggctagtaggactgaaacaaaaaggaaggag caggcctcaaaagacagtgatcggttggcccagagcaatcgacaatcagcgtcacagcaa agcctcagtgggtcctcagctgccggggatcaggtttccagaacagaaacttctaagaag ccccagccaacaacgggacaatgcgatgtgccttccatgtcaccttatgcagctcggcag gagggtgactggagagcttctgcatcgaaaagcggtttgaaagcccgcagtgacggaggt cgaagtaatagcagtaattggagcaaagacgatcgtgttttaacgaggagaacagaggag tcaccagacaacagagactcaaacagtgccaagcgaagaaagacctctcactga

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