Opisthocomus hoazin (hoatzin): 104329805 Help Entry 104329805         CDS       T08436                                  Symbol CDH23 Name (RefSeq) cadherin-23   KO K06813   cadherin 23 Organism oha  Opisthocomus hoazin (hoatzin) Brite KEGG Orthology (KO) [BR:oha00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oha03037]     104329805 (CDH23)    04515 Cell adhesion molecules [BR:oha04515]     104329805 (CDH23) Cilium and associated proteins [BR:oha03037]  Primary cilia and associated proteins   USH complex and associated proteins    104329805 (CDH23) Cell adhesion molecules [BR:oha04515]  Cadherins   Major cadherins    104329805 (CDH23) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Fibulin_C PCDH15_12th Motif Other DBs NCBI-GeneID:  104329805 NCBI-ProteinID:  XP_009933256 LinkDB All DBs Position Unknown AA seq 3342 aa AA seqDB search MPGSWGNRLPYFINYFFDTYLLINEDTPVGSSVTQLLARDLDNDPLVFGVVGEEASRFFA VESVTGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGTVNIQVGDVNDNAPRFHNQPYSV RIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSNFFAIDSGRGIVSVIRELDYEVTQ AYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIFINLPYSTNIYENSPPGTTVRMIT AIDQDKGRPRGIGGTCCQRYSQLYRLLEGKCHFEPQAGAGNTNSIFALDYISGALTLNGP LDRENPFYTSGFVLTVKGTELNDDRTPSNATVITTFNILVIDINDNAPEFNSSGYSVAIP ELAQVGFALPLFIQVQDKDEGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLD FETIPRYEFSLFANESVPDHVGFARVKINLINENDNRPIFSKALYNVSLFENATVGTTVL QVHATDNDVGTYGKVSYFFSDDPDRFSLDKDTGIILLTARLDFETTQRYTLTIIARDGGG EETTGRVRINVLDVNDNVPTFQKEAYLGALRENEPSITQVVRLRASDEDSPPNNQITYSI VQASAFRDYFDIAVSEGYGVISVNHPLDYEQVANGVIYLTVMAKDAGTPPLNSTVPVTIE VFDENDNPPTFSKPSFVITVMEDIMAGATVLFLNATDMDRSREYGQESIIYSLEGSSHFR INARSGEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKD EPYLINLVEMTPPNSDVTTVVAVDPDLGENGTVVYSIRPPNKFYSLNSTTGKIRTSGVLL DRENPNAQEAQLMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFAAEIA EGLPAGSSVFQVVAIDLDEGPNGQVTYRMQVGMPRMDFLINSTSGLITSTTMLDRERIAE YYLRVVASDAGVPSKSSTSTLTVKVLDVNDENPTFFPAVYNVSLPENVARDFKVVRLNCT DADTGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASYTLILEAIDNGPTGN RRTGTATVYVTILDVNDNRPIFLQSSYEVSVPEDIPAASSIVQVKATDSDEGVNGRVWYR IVKGNEHNNFRINPSTGLVMRGVRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIIYVED VNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRDTGNSGLVNYKILSGAEGKFEIDE STGLITTIEYLDYETKTSYLMNVSATDQAPPNNQGFCSVYVSLLNELDEAVQFSNSSYEA VIIENIPLGSEVLRVQARSIDNLNQITYKFDPNTNAQALSLFKINGITGVITVKGQVDRE KGDFYTMTVVADDGGPKIDSTVKVTITVLDENDNSPQFDITSDSSVSVAEDSMVGKRVAV VLARDPDAGSNGQVTFSLMSGNIGRAFEIRTTNNTYGEVFVAQPLDRELLDHYTLRIQAS DGGVPPRRKEHTLRVNILDVNDNPPIIDSPFGYNVSVSENVGGGTAVAQVHATDRDVGLN SVLSYYITRGNEDLTFRMDRVTGEIATRPSPPDRERQSFYSLVVTVEDEGNPSLSATTTV YVTVLDENDNAPAFQQQLYEVTLDEGPATLNATLVTVKALDWDEGPNGTVAYAIAEGNIL GTFHIDSATGQIRTVKELDYEISHGRYTLIVTATDQCPIFSRRLTSTATVLVNLNDINDN RPTFPRPYEGPFDVTEGQPGPRVWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGE LRVRKDAELDRENIAFYNLTIAARDRGVPPLSSTILVGVRVLDINDNDPVLLNLPMNITL SENAPISSFVTRILARDADKGLNALLTFDITAGNTENAFYINSTSGIVYVNHPLDRERVA EYRLTITVKDNPENIRNARRDFDLLVISIADENDNHPIFTQSSYQAEVVENSPPGTPVTV HNGPILALDGDQGSNALVTYQLLEASLDLFVIDNRTGVISVKPGSVIDREALPDPHLEFT LVAHDIGGLKSTASLLVTVLDDNDNRPIFQPASIVARLRENSPPGFSVLQVSATDADSRF LIDGTTGVIRVANISIDREERDAYRLMVVAVDQGTPALSGTATVSLFIDDVNDCRPEFIN PIQTVSVPESAAPGTVVAEVTAIDRDLHPRLEYYLLEIVARDDTDALVPNQQGTFTVDFR TGAVKIKTPLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRPF GVTYFTERILEGATEGTTLISISAVEPAWGGGSLGQVGSLGQVSHFRVCHSLGKVVANRT VDYEEVQWLNFTIRASDNGSPRRSAEIPVYLQIVDINDNNPIFSQPSYQKAVFEDVPLGT VILRVKATDADSGRFALIQYSLGDGEGKFGINPNTGDIYILSALDREKKDHYTLTAVARD NPGDVSSNRRENSVQVLITVLDINDFRPQFSKSQFSTSVYENEPAGTSVITMTATDLDEG DNGVVTYSVEGPGAEAFKINKDSGLITSQRRLQSYERFNLTVVATDKGHPPLWGTTMLHI EVIDINDNRPVFIRPPNGTILHIKEEIPLRSNVYEVYAMDKDEGLNGAVLYNLLKTGAGN KDWEYFSIDSVSGLIQTAMRLDREKQAVYNLIIVACDQGQPAYETMQPLQVALDDIDDNE PIFLRPPRDSPQYQVLSVPEHSQPGTVVGNVTGAVDADEGSNAIVYYFIAAGNRENNFQL SREGKLQVLRDLDREKEPYYSIIVKASSQRNWSPPRGQRAGRTQLWDLTGDLTLQEVRIF LDDINDQSPQFTKSEYTAGVATDAKVGSELIRVVAVDADVGNNSLVLYNILGIRYIKQHS NDSEEVANVFSIGTLDGILRTFDLFTAYNPGYFVVDIMASDLVGHNDTAIVGIYILRDDQ RVKIIINEIPDKVRQFEEEFISLLSNITGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVN RETNRILDVERVIQMIDENKEQLRNLFRNYNVLDVQPAITARAPDDLSALQMAIIVLAVL LFLAAMLFILMNWYYRTVHKRKLKAIVAGSTGNRGFMDIMDMPNTNKYSFDGANPVWLDP FCRNMELAAQAEHEDDLPENLSEITDLWNSPARTHGTFGREPSAAKPEDDRYLRAAIQEY DNIAKLGQIMREGPIKGSLLKVVLDDYMRLKKLFAQRMVHKATTSQGDCSSVSELIQKEL EEEEEERRPSQRSLRFRHKQPVELKGPDGIHVVHGSTGTLLASDLNSLPEDDQKVLGRSL ETLTTDCGGYSDHNARTESAKSTPLHKMREVIMESPLEITEL NT seq 10029 nt NT seq  +upstreamnt  +downstreamnt atgcctggcagttggggcaatcggctgccgtacttcataaactacttctttgacacctac ctgctgatcaatgaggatactcccgtgggttcctcagtgactcagctgctggcccgggac ctggacaacgacccgctggtctttggcgtggttggggaggaggccagccgattctttgca gtggagagtgtgaccggtgttgtctggctcaggcagcccttggacagagagacaaagtca gaattcacggttgaattttctgtcagtgacagccaaggggtgatcaaagggacagtcaac atccaagttggagatgtgaatgacaacgccccgcggttccacaaccagccgtacagcgtc cgcatcccagagaacactccggtgggcactccgattttcatagtgaatgccacggatccc gaccagggggcaggaggcagcgtgctttactccttccagcctccttccaatttcttcgcc atcgacagcggccgtggcattgtgtcggtgatacgggagctggactatgaagtgactcag gcataccagctccaggtcaatgcgacggaccaagataaaaacaagccactgtccactctg gccaacctggcaatcaccatcacagatgtacaggacatggaccccatcttcatcaacctg ccctacagcacgaacatctatgagaactcgcctccgggtaccacagtgcggatgataaca gcaatcgaccaggacaagggccgtccccggggtatcggcggcacatgctgccagaggtat tcgcaactttatcggctgttggaaggaaagtgccattttgagccccaagctggggcaggt aacaccaacagcatctttgcactggactacatcagtggagctttaaccctgaatgggccg ctggaccgagaaaaccccttctatacctctggatttgtcctcacagtgaaggggacagaa ctgaatgatgaccgcacgccctccaatgccactgtcatcaccaccttcaacatcctagtc attgacatcaatgacaacgcacccgagttcaacagctcagggtacagcgtggccatcccg gagctggcccaggtgggctttgcccttcccctcttcatccaggtgcaggacaaagatgag ggacccaacagtgttttcgaggtttacctggtgggcaacaactccaaccacttcatcatc tcgccgacatccatccaggggaaggcagacatccgcgtccgtgtggcagtgccgctggac tttgagaccattcctcgctacgaattctcgctctttgcaaacgagagcgttcctgaccat gttggctttgcccgtgtgaagattaacctcatcaacgagaatgacaaccgccccattttc agcaaggccctgtacaatgtcagcctcttcgagaatgccaccgtgggcaccaccgtcctc caggtccacgcaactgacaatgatgtaggcacatatgggaaagtcagttattttttcagc gatgaccctgaccgtttctcactggacaaggacacgggcataatcctcctgacagctcgg ctggactttgagaccacgcagcgctacaccctgaccatcattgcccgggatggcggcggg gaggagacaacgggacgtgtcaggatcaatgtcctcgatgtcaatgacaatgtccccacc tttcagaaggaggcatacctgggggctctgcgggagaacgagccctccatcacccaggtg gtccggctccgggcgtctgacgaggactcccctccaaacaaccagatcacatacagcatc gtgcaggcgtctgccttccgtgactactttgacatcgcagtgtcggaagggtatggagtg atcagtgtaaaccacccccttgactacgagcaggtggccaacggggttatttacctgacg gtgatggccaaggatgctggcaccccgccactcaacagcactgtccctgtcaccatcgag gtgtttgatgaaaacgacaacccccccacgttcagcaagccctcttttgttataactgtt atggaggacatcatggcaggagccacggtgctgtttctcaatgccacggacatggaccgg tccagggagtatgggcaggagtcaatcatctactccctggagggctcctctcattttcgg atcaatgctcgttcaggagaaatcacgacaacgtctttgctggaccgggaggccaaatcc gagtacatcctcattgtccgggcagtggatggaggtgtgggccaccatcagaagacaggc attgctatggtgaacatcacgctgctggacatcaatgacaactatcccacctggaaggat gagccatacctcattaacctggtggaaatgaccccccccaactcagacgttaccacggtg gtggcagttgacccggacctgggggagaatggcacggtggtgtacagcatccgaccaccc aacaagttctacagcctcaacagcaccacaggcaagatccgcaccagtggtgtcctgctc gaccgggagaaccccaatgcccaggaggcccagctcatgcggaggatcgtggtgtcggtc accgactgcgggaggccacccctgcgagctaccagcagtgccacagttttcgtcaacctg ctcgacctgaatgacaatgaccccactttccaaaacctgcccttcgccgccgagattgcc gagggccttcccgcaggctcctccgtcttccaggtagtggccattgacctggacgagggt ccaaacgggcaggtgacataccgcatgcaggtggggatgccccgcatggatttcctcatc aacagcaccagtgggcttatcacctccactaccatgctggacagggagaggatcgccgag tactacttgcgggtggtggccagcgacgccggcgtgccctccaagagctccaccagcacc ctgaccgtcaaagttctggatgtgaacgatgagaaccccaccttcttcccagccgtctac aatgtgtcgctgcctgaaaacgtggcccgggatttcaaagtggtccggctcaactgcacg gatgctgacactgggctgaacgctgagctcagctatttcatcacaggtgggaaccaggac ggcaaattcagcgttggcttcagggatggggtggtcaggactgtcgtgagcctggacaga gagaccgtggcatcgtacacactgatcctggaggccattgacaatggccccacagggaac cggcgcactgggactgccaccgtgtatgtgaccatcctggacgtcaatgacaaccgaccc atcttccttcagagcagctacgaagtcagcgtccccgaggacatcccggctgccagcagc atagtgcaggtgaaagccacagactcagatgaaggtgttaacgggagagtatggtacagg attgtcaaggggaatgagcacaacaacttccgcatcaatcccagcaccgggctggtgatg cggggtgtgcggcacctggacagggagcaaaactcctctcatgtcctggaggtggaggcc tacaacacggagcagggacccatgaggagctccgtgcgggtgatcatctatgtggaagat gtcaacgacgaggtgccagtgttcacccagcggcagtacaaccgcctggggctgcgggag acagctgggatagggacttcagtggcggtggtccgggccaccgaccgagacacagggaac agcggtctggtgaactacaaaatcctgtcaggcgctgaagggaagtttgagatcgatgag agcacgggccttatcacgacaatcgagtacctggactacgagaccaaaaccagctacctg atgaacgtctctgccacggaccaggcaccccccaacaaccagggcttctgcagcgtgtac gtcagtctgctgaatgagctggacgaggccgtgcagttctccaacagcagctacgaggct gtgatcatagagaacatcccgctgggctccgaagtcctcagggtccaggcccgctccatt gacaacctcaaccagatcacctacaagtttgaccccaacaccaacgcacaagcgctctcc ctcttcaaaatcaacggaatcactggtgtgatcacagtcaaaggccaggtggatcgagag aagggggatttctacaccatgacagtggtggctgatgatggaggaccaaagattgactcc acggtgaaggtgaccatcacggtcctggatgagaatgacaacagcccccagtttgacatc acctctgactcctctgtgagcgtggcagaggacagcatggtcggcaagcgggtggctgtg gtcctggcccgcgacccagatgcaggcagcaacgggcaggtgactttctcactaatgtcg gggaacatcggccgggctttcgagatccgtaccaccaataacacctacggcgaggtgttt gtggcacagccgctggaccgggagctgctggatcactacaccttacggatccaagcctca gatggtggtgtgcctccccggaggaaggagcacactctgcgagtgaacatccttgatgtc aatgacaacccccccatcattgacagccccttcggctacaacgtgagcgtgagcgagaac gttggtggtggcacagcagtggcccaggtacatgccaccgaccgggacgtcggcctcaac agtgtcctctcctactacatcacccgtgggaatgaggacctcaccttccgcatggaccgc gtcactggcgagatcgccacccggccctccccaccggaccgcgagcggcagagcttctac agcctggtggtcactgtcgaggatgagggcaacccctccttgtcggccaccaccacagtg tacgtcaccgtgctggatgagaacgacaatgctccggctttccagcagcaactgtatgag gtgaccctcgatgaaggtccagccacgctcaatgccacccttgtcactgtgaaggccctg gactgggatgagggacccaatggcacggttgcgtacgccatcgccgaaggcaacattttg ggtaccttccacatagacagcgccacgggacagatccgcacggtgaaggagctggactat gagatcagccacgggcgctacaccttgatcgtcactgccaccgaccagtgccccatcttc tcacgccggctgacatcgactgccacggtgctggtgaacctcaacgacatcaacgacaac cgtcccaccttccctcgaccctacgaaggtcccttcgatgtcacggaggggcagcccggc ccacgcgtctggaccttcctggcccacgacggtgactcaggacccagcgggcaagtggag tacagcatcatcgctggggaccctcttggagagtttgtgatctccccggtggaaggggag ctgcgagtgcggaaggatgctgagctggaccgtgagaacatcgccttctacaatctcacc attgccgcccgggaccggggggtgccccccctcagctccacgatcctggtgggcgtccga gtgctggacatcaatgacaacgaccctgtgctcctcaacctcccgatgaacatcaccctc agcgagaatgcccccatctccagctttgtcacccgcatccttgcccgggatgcggacaag gggctgaatgccctcctgaccttcgacataacagcaggcaacacggagaacgccttctac atcaacagcaccagcggcattgtctacgtaaaccaccctctggacagggagcgggtggca gagtacaggctaaccatcacagtgaaggacaaccctgagaacatacgcaatgccaggcgg gattttgacctgctggtcatctccatagcggatgagaatgacaaccaccccattttcacc cagagctcctaccaggctgaggtggtggagaactctcccccagggactccggtcacagtg cataacggacctatcctagctctggacggcgaccagggcagcaatgccttggtgacctac cagctcctggaggcatccctggacctatttgttatcgacaacaggacaggtgttatttca gtgaagcctggcagtgtgatagaccgagaggctttgccggaccctcacctggagttcaca ctggtggctcatgacatagggggcctgaaaagcaccgccagcctgttggtgaccgtctta gatgacaatgacaaccgccccatcttccagccggcctccatcgtggcacggctgcgggaa aacagccccccaggcttctctgtcctccaggtgagtgccacagatgctgacagtaggttc ctgatcgacggcaccacaggggtgatccgcgtggccaacatcagcatcgaccgggaggag cgggatgcctaccggctgatggtggtggccgtggaccagggcacgccagcactctcgggc actgccaccgtcagcctcttcatcgacgacgtcaacgactgccggcctgagttcatcaac cccatccagaccgtcagtgtccccgagtcagctgcccctggcacagtggtggccgaggtg accgccatcgaccgggacctccaccctcgcctggagtactacctgctggagatcgtggcc cgtgacgacacagacgccttggtgcccaaccagcagggaacattcacagtggattttagg acaggagctgtgaagatcaaaacccccctcaaccgggaattggtggccacctacgaagtc accatctctgtccatgacaatgccagcgaagtcatcgaccgctcggtcagcgtacccaat gccaagctgacagttaacgtcttggatgtcaatgacaacacaccccgtttccgccccttt ggggtcacctatttcactgagaggatcctggagggagccacagagggcaccacactgatc tccatctcagcggtggaaccagcctggggaggtgggagtctggggcaggttggtagcctg gggcaggtttctcatttcagggtctgccattctctagggaaggtcgtggccaacaggacg gtggactacgaggaggtgcagtggctgaacttcaccatccgagcttccgacaatggctct ccacgcagatctgctgagatccctgtgtacctccagatagtggacatcaacgacaacaat cccattttcagccagccatcctaccagaaagctgtctttgaggatgtgccgttgggtaca gtcatcctgagagtcaaggccacagatgcggattctgggcggtttgctctcatccagtac agcctgggggatggagagggcaagtttgggataaatcccaacacgggtgacatctacatc ctgtcagccctggaccgggagaagaaagatcactacacgctgacagctgtggccagggac aaccctggggacgtctccagtaaccgtcgtgagaactccgtgcaggtgctgatcacagtc ctggacatcaacgacttcaggccccagttcagcaagagccagttcagcaccagcgtctat gagaacgagccagcagggacatcggtgatcaccatgactgccacagacctggacgaaggg gataacggagtggtgacctacagcgtcgagggacccggagcagaggctttcaagatcaat aaagactctgggctcatcacatcccagcggcgcttacagtcctacgagcggttcaacctg accgtggtggccacggacaagggacacccccctctctgggggaccaccatgctccacatt gaggtcattgacatcaatgacaaccgccccgtcttcatccgcccacccaacggcaccatc ctgcacatcaaggaggagatccccctgcggtccaacgtctacgaggtctacgccatggac aaagatgagggcctcaacggagcagtgctctacaatctgctgaaaaccggggcagggaac aaagactgggagtatttcagcatcgactcggtcagcggactgatccagacggccatgcgg ctggaccgggagaagcaggcagtgtacaacctgatcatcgtggcctgcgaccagggacag ccagcctatgagaccatgcagcccctccaggttgccctcgatgacatagatgacaatgag cccatcttcctccggccacccagggacagtccccagtaccaggtgctctccgtccctgag cactcacagccaggcaccgtggtggggaacgtcaccggggctgtggatgcagatgagggc tccaatgccatagtctactacttcatagcagctgggaacagggagaacaacttccagctg agccgggaggggaagctgcaggtcttgcgagacctggaccgggagaaggagccatactac tccatcattgtcaaagcatccagccagaggaactggtcccctcctcggggccagcgggca ggcaggactcagctctgggacctcaccggggacctgacacttcaggaggtgcggatcttc ttggatgacatcaacgaccagtccccacagttcaccaagtcggagtacactgcgggggtt gccaccgacgccaaggtgggatcggagctgatcagagtggttgcagtggacgccgatgtg ggcaataacagcctggtcctgtacaacatcttgggaatccgctacatcaagcagcactcc aatgactctgaggaggtggccaacgtcttcagcattggaacccttgatgggatcctgcga accttcgacctcttcaccgcctacaatcctggctactttgtggtggacatcatggcctct gacctggtgggccacaatgacacagccattgtagggatttacatcctacgggatgaccag cgggtcaaaatcataatcaacgagatccctgacaaagtcaggcagttcgaggaggagttc atcagcctgctctccaacatcacgggtgccattgtcaacacagatgatgtgcagttccat gttgacaagaaaggtcgggtgaactttgcgcagacagagctgctgatccacgtggtgaac agggagaccaaccgcatcctggatgtggagcgggtgattcagatgatagatgagaacaaa gagcagctgaggaacctcttcaggaactacaacgtgctggacgtgcagcctgccatcact gctcgggccccagatgacctctcggctctgcagatggcaatcatcgtgctggccgtcctg ctcttcctggctgccatgctcttcatcctcatgaactggtactaccggacagtgcacaaa aggaaattgaaagccatagtggctggctccaccgggaacagaggcttcatggacatcatg gacatgccaaacaccaacaagtactcgtttgatggggccaacccggtgtggctggacccc ttctgcaggaacatggagctggcagcacaggcagagcacgaggatgatctgccggagaac ctgagtgagatcaccgacctctggaacagccctgcccgcactcacgggacctttgggaga gagccctccgcggccaaacctgaggatgatcgctacctgcgggcagccatccaggagtac gacaacattgccaagctggggcagatcatgcgggagggacccatcaagggctctctcttg aaggtggtcctggatgattacatgcgcttgaaaaaactctttgcccagcggatggtgcat aaggccaccaccagtcagggggactgctcttcggtctcggagctgatccagaaggagctg gaggaggaggaagaggagcgcaggcccagccagcgcagcctccgcttccgacacaagcag ccggtagagctgaaaggtcccgacggcatccatgtggtgcacggcagcacaggcacgctg cttgcctccgacctcaacagcctgcctgaagatgaccagaaggtgctgggtcgctcgctg gagactctgaccaccgactgtgggggctacagtgaccacaacgcccgcacggagtcggcc aagtccacccctctgcacaagatgcgggaggtgatcatggagagcccgctggagatcacc gagttatga

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