Opisthocomus hoazin (hoatzin): 104330096
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Entry
104330096 CDS
T08436
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oha03000
]
104330096 (SOX6)
Transcription factors [BR:
oha03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104330096 (SOX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104330096
NCBI-ProteinID:
XP_009933566
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All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MPSNSEVLPGVVGESRTEEWKNSHYIRMSSKQATSPFACAADGGETMTQDLASRDKEEGN
NDQHVTSHLPLHNIMHNKPHSEELPALVTTIQQDPEWDGVISAQHRMESESNKLCSLYSF
RNTSTSPNKPDEGGRDRSELMTSVNFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSS
CKEKLLSKDWKEKMEKLNTSDLLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPI
FPHDQRGLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAA
QLASMQVSPGAKMPSTPQPPNTTGALSPTGMKNEKRGTSPVTQVKDEAAQPLNLSARPKT
AEPVKSPTSPTQNLFPASKSSPVTVTNKSGIPSPLGGSLGRGSSLDILSSLNSPALFGDQ
DTVMKAIQEARKMREQIQREQQQQQQPHGVDGKLPSMNNMGLNNCRNEKERTRFENLGPQ
LTGKPNEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDSR
GRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYE
EQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQ
IPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKTDSGSLAGN
EMINGEDEIEMYEDYEDDPKSDYSSENEAHEAVSAN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaaactctgaagtgctgcctggtgtggtaggagaaagcaggacagaagagtgg
aagaacagccattatataagaatgtcttccaagcaggctacctctccatttgcatgtgca
gctgatggaggggaaacaatgacccaggacttagcatcacgagacaaggaagagggcaac
aatgatcagcatgtgacctctcatctgcctctacataatataatgcacaacaaacctcac
tctgaggagctaccagctctggtcacgaccatccaacaagatcctgagtgggatggagtc
atctcagcccaacacagaatggagtcagagagtaataagttatgttccctatattccttc
cgaaatacctctacctcaccaaacaagccggacgaaggaggtcgtgaccgcagtgagcta
atgaccagtgttaattttggaacgccagaacgccgcaaaggaagccttgcagatgtggtg
gacacactgaagcagaagaaactagaagaaatgaccaggactgagcaagaggattcatcc
tgcaaggaaaagctactttctaaagactggaaggagaagatggaaaaattaaacacaagt
gatctccttggagaaattaaaggtacaccagaaagcctggcagaaaaagagcgacagctc
tctactatgatcacccagctgatcagcttacgggagcagctcctggctgcccatgatgaa
cagaaaaagctggcagcctcgcaaattgaaaaacaacggcagcaaatggaccttgctcgc
caacagcaagaacagattgcaagacaacagcagcaacttctgcaacagcagcacaaaatc
aatctactgcagcagcaaattcaggttcagggtcacatgcctccgctcatgatcccaatt
tttccacacgaccagcgggggctggcagcggctgctgcagcccagcagggattcctcttc
cccccaggaataacttacaagccaggtgataactaccctgtgcagttcattccatcaaca
atggcagctgctgctgcttctggactcagccctttacagctccagcaactgtatgcagct
cagctggcaagcatgcaagtttctcctggagccaaaatgccatctactccacagccacca
aatacgacaggggcactctcacccactgggatgaaaaatgagaagcgagggaccagcccg
gtaactcaagttaaggatgaagcagcccagccactgaatctttcagcccgacccaaaaca
gctgaacctgtcaaatccccaacatctccaacacagaacctcttcccagctagtaaaagc
agtccagtgacagtgacgaacaagagtggcatccccagcccgcttggtggatctctggga
agaggatcctctttagatatcctttccagtcttaattcacctgccctgtttggggaccag
gacacagtaatgaaagccattcaagaggctcgaaaaatgagagagcagatccaaagggag
cagcagcagcaacagcagccgcatggtgttgatggaaaattgccctccatgaataacatg
ggtctaaacaactgcaggaatgaaaaggaaagaacaaggtttgaaaatttaggcccacag
ttaacagggaaacccaatgaagatggaaaactgggccctggtgtcatcgatcttacaagg
ccagaagatgcagaaggcagtaaagcaatgaatggctctgcagctaaactacagcagtat
tattgttggccaacaggaggtgccactgtggctgaagctcgagtctaccgggattcgcgg
ggccgagccagcagcgaaccgcacatcaaacgaccaatgaatgctttcatggtttgggca
aaggatgagcgtcgaaaaattctccaagccttccctgacatgcacaactccaacattagc
aaaatcctaggatctcgctggaagtccatgtcaaatcaagagaaacaaccgtattatgaa
gagcaggcacggctaagtaaaatccacctagaaaagtatcctaattacaaatacaaacct
cgaccaaaacgtacctgcattgttgatggaaagaaattgcgtattggtgaatacaaacaa
ctgatgaggtctcgaagacaggagatgaggcagttttttaccgtaggacaacagcctcaa
attccaatcaccacgggaacgggggttgtctatcctggtgctattaccatggcaactacc
acgccatcacctcagatgacatcagattgctcaagcacctctgccagccctgagcccagc
atccctgtcattcagagcacttatggtatgaagacggacagcggaagccttgctggaaat
gaaatgataaatggagaggatgaaatagaaatgtacgaggactatgaggatgatcccaaa
tcagactatagtagtgaaaatgaagctcatgaggcagtcagtgccaactga
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