Opisthocomus hoazin (hoatzin): 104330173
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Entry
104330173 CDS
T08436
Symbol
PRDM11
Name
(RefSeq) PR domain-containing protein 11
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oha03000
]
104330173 (PRDM11)
Transcription factors [BR:
oha03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104330173 (PRDM11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
Zn_ribbon_PRDM4
FOG1-like_PR
DUF7822
DUF4954
Motif
Other DBs
NCBI-GeneID:
104330173
NCBI-ProteinID:
XP_009933651
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MSENLKDCLIQTQASLGEMVTIKTEACSPRRDQEYGQPCSGRPDPQSMEVEPKKLKGKRD
LIMTKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPPGMEVVK
EPNGENDVRCMNEVIPKGHIFGPYEGQISSQDKSAGFFSWLIVDKNNRYKSIDGTDETKA
NWMRYVIISREEREQNLMAFQHSERIYFRACRDIHPGEKLRVWYSEDYMKRLHSMSQETI
NRNLTSGNKKLQREKSEKNVENPEDARGSLQLATLKQGKSPYKRSYDEGESHPQTKKKKI
DLIFKDVLEASLESARFEENQLATSTPLSIRRASKYQAEDIFERCSSALQHGSLNLSRNR
SEGEWKVPHGSSFSSAKEVGILEEEEEEPLSLKADSPTELSLASAQGNSHEIPTTSFCPN
CIRLKKKIRELQAELDMVRSGKLPGPPVLPPQVPELQEFSDPTASESVISVPTILEDDDQ
EVDSADESVSNDMIAATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCR
QYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLF
NTAYHLALEGRPYYDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIR
QSPFLSIILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSTTDSYLQALDRAF
SSLGIRLQDEKPTVGLGVDGANITASLRANLFMTIRKTLPWLLCLPFMVHRPHLEILDAI
SGKELPCLEELENNLKQLLSFYRYSPRLMCELRVTAATLCEETEFLGDIRAVKWIIGEQN
VLNALIKDYLEVVAHLKDISGQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSR
LAYVFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAVKNLRVAE
AKFQSIREKICQKTQVILAQRFDSRSRTFVKACQVFDLAAWPRSTDELMSYGKEDMVQIF
EHLETVPLFSREVCREGMDTRGSLLMEWRELKVDYYTKNSFKDLLSHICKYKQRFPLLNK
IVQILKVLPTSSACCEKGRAALQRVRKNNRSRLTLEQLSDLLTIAVNGPPIANFDCKRAL
DSWFEEKSGNSYALSAEMLSRMSSLDQKPMLQSMDHGSEFYPDI
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaacttgaaggactgtttgatccagacccaggcttccttaggggagatggtg
acgataaaaacagaggcctgctctccgcgccgggaccaggagtatggacagccttgctct
ggaaggcctgacccgcagtccatggaggtggagcccaagaaactgaaagggaaacgggat
ttgatcatgaccaagagctttcagcaggtggatttctggttctgtgagtcctgccaggag
tacttcgtggatgagtgcccgaaccacggcccgccggtctttgtgtctgacaccccagtg
cccgttggcatccctgatcgggcagcactgaccatcccgcctggaatggaggtggtgaaa
gagcccaacggggagaacgatgtgcgctgtatgaatgaggtgatccccaaaggtcacatc
ttcgggccgtacgagggacagatctctagccaggacaagtccgcaggattcttctcatgg
ctgattgttgataagaacaaccgctacaaatccatcgatgggacggatgaaaccaaagca
aactggatgaggtacgtgatcatctcccgggaggagagggagcagaacctgatggccttc
cagcacagcgagaggatttacttccgtgcctgccgtgacatccaccctggcgagaagctg
cgggtctggtacagtgaggactacatgaagcggttgcatagcatgtcccaggagaccatc
aacagaaacctcacaagcggaaacaaaaagttgcagagggaaaagtcagaaaagaatgtg
gaaaatccagaagatgcgagggggtcactccagctagccaccttaaagcaagggaagagc
ccctacaagcgcagctatgacgagggggaatcccacccccaaacaaagaaaaaaaagatt
gacctcatcttcaaagatgtcctagaggcttccttggagtctgcgagatttgaagagaac
cagttagcaacgagtacgccactttccatcagaagagcatctaaataccaggctgaagac
atctttgagaggtgtagcagtgcattgcagcatggctccctgaacctcagcagaaaccga
agtgagggggaatggaaggtcccccacggttcctctttcagctcagccaaagaggtgggc
atccttgaagaggaggaagaagagcccttgtcactcaaagcagacagcccgaccgagctg
tcactggcctctgcacaaggcaattcccatgaaatccccaccacctccttctgccccaac
tgcatccggttgaagaagaagatccgggagcttcaggctgagttagacatggtgagatct
gggaagttacctgggccccccgtgctaccgccccaggtacccgagctccaagagttctca
gaccccacagcttcagaaagcgtcatctctgttcccaccatcttggaggatgatgaccaa
gaggtggattctgctgatgaatcagtttccaatgacatgattgctgctacagacgagcct
tccaagatgtcttctgcaacgggccggaggatacggcggttcaagcaagagtggcttaaa
aagttttggtttctgcggtactccccaacgttgaatgaaatgtggtgccatgtctgtagg
cagtacacagtgcaatcctctcggacttcagccttcatcattggctcaaagcagttcaag
atacatacaataaagcttcacagccagagcaacctccacaagaagtgcctgcagctttac
aagctcagaatgcacccagagaagacagaagagatgtgccgaaatatgaccctgctcttc
aatacagcctaccacttggccctggagggcaggccctactacgactttcggcctctggca
gaactactgagaaagtgtgaactcaaggtggtggatcaatacatgaacgagggagactgt
caaattttaatccaccatattgcccgggctcttcgagaggacctggttgaacgcatccga
cagtctcccttcctcagtatcattctggatgggcagagcgatgacttgcttgcagacaca
gttgcggtatatgtacagtacacaagcagtgatgggcctccagcaaccgaattcctgtct
cttcaggaactgggcttttctacaacagacagttacctccaagcgttagacagggctttt
tctagcctgggcatacgtttgcaggatgagaagccaactgttggcttgggagtcgatggt
gctaacattaccgccagcctgagagcaaacttgttcatgacaatcagaaagaccttgccc
tggcttctctgcctgccctttatggtgcacaggccccacctggaaattttggatgcaatc
agtgggaaggaactgccgtgcctggaggagctagaaaacaatttgaagcaactgcttagt
ttctatcgttactctccccgacttatgtgcgagttgagggtaactgctgccactctgtgc
gaggagactgaattcttgggggacattcgagcagtgaagtggatcattggggagcagaat
gtgctaaatgctctaataaaggattaccttgaggttgtggcccatctcaaagacatcagt
ggccagacccaaagggcggacgcttccgctattgccttggccctcctgcagttcctgatg
gactaccagtcaattaaactcatctacttcctgctggatgtgattgcggtgctttcacgc
ctcgcctatgtcttccaaggggagtaccttcttgtgtcgcaggtggatgataaaatagag
gaggccatccaggagatcagccggctagcagactcgcctggggagtacttacaggaattt
gaggaaaacttccgtgaaagctttaatggcattgctgtgaaaaacctacgggtggctgaa
gccaaattccagtcgatcagagaaaagatctgccagaagacccaagtgatcctggcccaa
aggttcgattcccgtagccggacatttgtgaaggcctgtcaggtatttgaccttgcagct
tggcccagaagcactgatgagctcatgagctatgggaaggaggatatggtacaaatattt
gaacacctggagacggtcccattgttttccagagaggtttgcagagaggggatggacacc
cgagggagtctgctgatggagtggcgagaactcaaggtggattattataccaaaaacagt
tttaaagacttgctcagtcacatttgtaaatacaaacagagattccccctcctaaataaa
atagttcagatcctcaaagtccttcccacctcatcagcctgctgtgagaaggggcgcgcc
gccctgcagagagtgcgcaaaaacaaccgctctcgcctcacgttggagcagctcagcgat
cttttgacgattgctgttaacgggccacccattgccaacttcgattgcaaaagggcgcta
gatagttggttcgaggagaagtctggtaatagttatgcgctgtccgctgaaatgctgagc
aggatgtcgtctcttgatcagaagccaatgttgcagagcatggaccatggctctgagttt
taccccgatatttag
DBGET
integrated database retrieval system
