Opisthocomus hoazin (hoatzin): 104330293
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Entry
104330293 CDS
T08436
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104330293 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104330293 (NUP54)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104330293 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104330293
NCBI-ProteinID:
XP_009933781
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MPVLSVAMEKYFSFSFLXPTFYLELMLPCSFSASRLSGFGGLETTNSTASGFNFGGFGLT
ANPAVNFNIGNFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTVGPTFSFSAPTNTGTSG
LFGANQNKGFGFGTSFGTGTGTGLGSGLGTGLGFGGFGTQQQQTTLGSGLFSQPAQTPAQ
SNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRF
KAVGYSLMPNNKDEDGLVVLVFNRKEVDIRSQQQQLVESLHKILGGNQTLTVNVEGVKTM
PDDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQV
KQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDI
ISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQ
LDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEG
LSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttgtctgtggcaatggaaaaatatttcagcttttctttcctgnaacctacc
ttttacttagaactaatgttaccttgctctttttctgcttcccgcttgtcaggatttggt
gggcttgaaactacaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcctgcagtgaattttaatattgggaatttcggtgtttccactacctcaactcca
ccattcaattttggtaacagtctggcaagtgcaggtgcgtttggagggtttgggacgact
actaccacagtgggaccaacattcagtttttctgctcccaccaatacaggcaccagcgga
ctctttggtgctaaccagaacaaaggctttggatttggtactagttttggcacaggaact
ggaactggcttgggtagtgggttgggaactgggctaggctttggaggcttcggtacccag
cagcaacagaccacattaggaagcggcttgttcagccagcctgctcagacacctgcccag
tcaaaccagctcatcaacacagccagtgccctctcggctccgacactcttaggagatgag
agagatgctattctggcaaaatggaaccagcttcaggccttctggggaacaggcaaaggt
tacttcaataataacatcgctccggtggagtttacacaggaaaaccccttttgcaggttt
aaggctgtgggttacagtttaatgcccaacaacaaagatgaagatggcctcgtggtcttg
gtctttaacagaaaggaagtagatattcgaagccagcagcagcagcttgtagaatcacta
cacaaaatcctgggaggaaaccagaccctcactgtcaatgtagaaggtgttaaaacgatg
ccagatgaccagacagaagtgatcatttacgttgttgagcgttcgcccaacggcacttcg
aggagagttcccgcaacgaccctctatgcccactttgaacaagccaacataaaatcatct
ctgcagcagctgggggtcagcctctccatggccagaacagagctttccccagcacaagtc
aaacagctcctgcagaaccctcctgccggtgttgatcctattatatgggaacaagccaaa
gttgataatcctgatcctgacaagcttattcctgtgccaatggtgggtttcaaggaactg
ttgagaagattgaaggtccaagatcagatgaccaaacagcatcaaactcgattagacata
atatcagaagatatcagtgagctgcagaaaaaccaaacaacaactatggcaaaaattgca
cagtacaaaaggaaactgatggcactttctcacagaacgttacaggtattaataaagcag
gagatccaaaggaaaagtggttatgctattcaagcagacgaagagcagcttcgtgtgcag
ttagatacaattcagtgtgaactcaacgcacccacacagttcaagggcagactgaatgag
ctcatgtcccaaatcaggatgcaaaaccactttggagcagtgcgggctgaagaacggtat
tacatagatgcagacctcttaagggaaatcaagcaacatctgaagcagcagcaagaaggc
ctgagtcacctaattagcattataaaggatgacttggaggacatcaaacttatagaacat
gggctgaacgagagcattcccatcagaggaggagtcttcagttga
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