Opisthocomus hoazin (hoatzin): 104330345
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Entry
104330345 CDS
T08436
Symbol
LIMCH1
Name
(RefSeq) LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oha04990
]
104330345 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
oha04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
104330345 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
104330345
NCBI-ProteinID:
XP_009933850
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MRKETEDIESPKRSIRDXRSGSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDG
RGSDSETDLPHRKMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFYVPAPLRKKK
AEREEYRKSWSTATSPLGDRPFRFGPRTAVSDDAESVSMFDMRSEEEAVTQPHSKARHEK
LQNVHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLSGDGMNERRKSIK
TYREIVEEKERRERELHEAYKNAKSQEEAESILQQYIERFTISEAVLERLQMPKILERSH
SVEPNSPLKDPNPLRYLRQQSLPAPKFTATIEATIVPTAELEPSSSTGRTSPSKSVVSKA
VPMLTPKPYSQPKNTQEVLKNFKVDGKVSMNGENFNGVEEKDKECSTVIFTPSPSRSLKF
DGVARGDRPPVELKKDPTSAELGLQSPATQSVHKEPTASPVEADGAASKQVGASPGSAGP
GSPVCPSPGSDQKQFKSTAACASPVVKRLEFLPSPVPSEEAASSEKDVKKPEMEQQKEAE
LPATPEVMKPKVLEQEGSVVLPFLKKLPETSQVTLQNSGLQEPPRGAAVPLRVRNNWRRS
QFFSQSADSETGDKSNVMSRFNFWSWDPEEERKRQERWQHEQERLLQEKYQKEQDKLKEE
WEKAQREVEEEERRYYEEERKIIEDTVVPFIVSSNSAELLSSSSSATEGNKTANSTDSNS
SPEEGKQKEVARQKKLLWEQNRTSSLKSKENELWQEKRSGNRVLSGHPETGILKGGEQEH
QVPVMERSSPARLNLPLTQDVSWNQQLLTKQSPHRTEDIRQRPVLGQSVGQQPSPAGETR
RAGYHENFQSGPSSPCSPAAPSQSPNRSVSGKKLCSTCGLPLGKGAAMIIETLGLYFHIQ
CFRCGICKGQLGDAASGTDVRIRNGLLNCNDCYIRSRTAGQPTTL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggaaacggaggatattgagagcccgaagcgcagcattcgcgatnnacgcagc
ggctccctctccccgccgcgccatggcagagatgattcctttgacagcctggactccttt
ggctcccgctcgcagcagacaccgtctccagatgtagtgctcagagggagcagcgatggg
agaggaagcgactcggaaacggacctgccgcacagaaagatgccagatgtgaaaaaagat
gatatgttggcgaggcggacctcacacggtgaacctaaatcagctgtgccttttaaccag
tacctcccgaacaagagtaatcagactttctatgtacctgctccacttcgaaagaagaaa
gctgaacgagaggagtaccgaaagagctggagcacggcgacttcacccctaggagacaga
cctttcagattcggccccagaactgctgtgtctgatgacgcagagagcgtgagcatgttt
gacatgagaagtgaagaagaagctgtgactcagcctcatagcaaagctcgccatgagaaa
ctgcagaacgtacacaaccagctgaaagaggacgagaccagatggcaggacgacctggct
cggtggaagagtcgccgaaggagcgcttcacaggatttaataaaaaaagaagctgagaga
aagaaaatggaaaggttgttgtctggagatggaatgaacgagcgcagaaaaagcatcaaa
acctaccgagaaattgtggaagagaaagagagaagagagcgggagcttcatgaggcatac
aagaacgcaaagtcacaggaggaggctgagagcatcctccagcagtatatcgaaagattc
actatcagcgaagctgtccttgagcgtttgcagatgccaaaaattctggaaagaagccat
tcagtggagccaaattccccactgaaagacccaaatcctctgaggtatttaaggcaacag
tcgctgcctgctccaaaattcactgccaccattgaagccaccattgttcccaccgctgaa
ctagaacccagcagttcgacgggccgcacatctcccagcaaaagcgttgtctccaaggct
gtgcctatgctgacacccaagccttactcgcaacccaaaaatacacaggaagttttaaag
aactttaaggtagatggaaaagtcagcatgaacggagaaaacttcaacggtgtggaagag
aaggataaagagtgttcaacagtaatatttactccttcgccaagcagatctctgaaattt
gatggagtagccagaggggacaggcccccggtagagttgaagaaggaccccacaagtgct
gagctcggtttacagagccctgccactcagagtgtgcacaaagagccaacagcctcgccg
gtggaagcagatggagccgccagcaagcaggttggggccagccctggcagcgcgggaccg
gggagcccagtgtgcccgtccccaggttcagatcaaaagcaattcaagtcaactgcagct
tgtgccagcccggttgtgaagagattagaatttcttcccagtcctgtcccttcagaggaa
gctgcttcaagtgagaaagatgtgaagaaacctgaaatggagcagcagaaggaagcagag
ctccctgctacaccagaggtgatgaaaccgaaagtcctggaacaagaggggagtgtagta
ttgccatttttaaagaaactacctgagaccagccaagttactctgcagaattctggtcta
caagagccgccccgcggggccgcggttccgcttagggttcgcaacaactggcggcgatcg
cagtttttctcgcagtcagctgattctgagactggtgacaaatcaaacgtgatgtcacgt
ttcaatttctggtcctgggatccagaagaagagcgaaagcgccaggaaaggtggcagcac
gagcaagaacgcttgcttcaggagaagtatcagaaggagcaggacaagctgaaagaggaa
tgggaaaaggcccaaagagaagttgaagaggaggagcgtagatattacgaggaggaacgt
aagataattgaggatactgtagttccattcattgtttcttcaaactctgctgagctcctc
tcctcctcctcttctgccactgaaggaaacaagacagcgaactcaactgattcaaacagc
tctccagaggaaggcaagcaaaaagaagttgcaaggcagaaaaagctgctctgggagcag
aacaggacgtcgtctctgaaaagcaaggaaaatgaactctggcaagaaaagaggagtgga
aacagagtgctctcaggacacccagagacgggtatcttgaaaggaggtgaacaggagcac
caggtgccggtgatggagcgcagctcacctgccaggctgaatctgccgttgactcaggat
gtctcctggaatcagcagttgctgacaaagcagtccccgcatcgcacagaggacattcgg
cagagaccggtcctgggccagagtgtgggacaacagccgagccctgcaggggaaacaagg
agggcgggctatcatgagaacttccaatctgggccatcgtctccctgctctcccgctgct
ccgagtcagtcacccaacagatctgtcagcgggaagaagctgtgttctacctgtgggctt
cctcttggaaaaggagctgccatgattatagaaacgcttggtctctatttccatattcag
tgcttcaggtgtggcatttgcaagggacagctgggagacgcagcaagtgggacagatgtc
aggattagaaacggtcttcttaactgcaacgattgttatatccgatccagaactgctgga
cagccgactacattgtga
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