Opisthocomus hoazin (hoatzin): 104330586
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Entry
104330586 CDS
T08436
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03250
Viral life cycle - HIV-1
oha04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104330586 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104330586 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oha03400
]
104330586 (SAMHD1)
DNA repair and recombination proteins [BR:
oha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104330586 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
Pdc1_Ge1
HD_assoc_2
HARE-HTH
PDEase_I
Motif
Other DBs
NCBI-GeneID:
104330586
NCBI-ProteinID:
XP_009934120
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MPPVARSPCACQSLPSERLKVLACLNALREQCMDVMKVFNDPIHGHIEIHPLLVRIIDTP
QFQRLRYIKQLGGTYFVFPGASHNRFEHSIGGGAGCLVRALKERQPELDITQRDILCVEI
AGLCHDLGHGPFSHMFDGRFIPLTRPDLKWKHETASVEMFEHLITSNKLEEVMKSYGLVL
EEDMNFIKEQIGGPIDETACEESWPYLGRRKEKSFLYEIVANKKNGIDVDKWDYFARDCH
HLGIQNNFDYKRLLKFTRVCEVKNQKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKIGNI
IEIMITEAFQKADKFFKIEGSGGKLYQISTAMEDMEAYTKLTDNIYLEILHSSCPELKEA
QEILRKIERRELYKFLGETQPETMREIVKSNSLAESIANSKPEKDPPDVELKAEDFIVDV
INMDYGMKEQNPIDNVLFYCKADPSQAVKISKEQVSKLLPMTFAEQVIRVYCKSQDPNIV
SAAKQYFIQWCIEKDFTKPQDSDVVAPHLTPMKKSWNNSRDGEHRTASEPSCKQRLAFHK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggtggcacgatcgccttgcgcgtgtcaaagcctcccatcggagcgactgaag
gtgctggcctgcctgaacgccctgagagagcagtgcatggacgtgatgaaggttttcaac
gatccaattcatggtcacattgaaatacatccccttctggttcgaatcatcgacacgccg
cagtttcagcgcctccgatacattaagcagctgggtggcacttactttgtttttccagga
gcctctcacaaccgctttgaacactccataggggggggggcagggtgtctggttcgtgca
ctgaaggagagacagccagaactggatatcacccaacgagacatcctctgtgtagaaatt
gctgggctttgtcatgatttgggtcatgggccattttcacacatgtttgatggaagattt
attccactcacacgtccagatttgaagtggaagcatgaaactgcttctgttgaaatgttt
gagcacctgatcacttccaataaactagaagaagtcatgaagtcctatggtcttgtcctg
gaagaagacatgaacttcatcaaggaacaaataggaggacctatagatgaaaccgcttgt
gaggaatcgtggccctaccttggtcgacggaaggagaaaagtttcctatatgagatagtg
gcgaacaaaaagaacggcattgatgttgacaaatgggattattttgcaagggattgtcat
cacctaggaatccagaataattttgattataagcgattacttaaattcactcgagtctgt
gaagtaaaaaaccagaagcatatctgtacccgtgacaaggaagttggaaatttgtatgat
atgttccacacacgcaattgcctgcaccggcgagcataccagcataagattggcaacatc
attgaaataatgattacggaagcctttcaaaaagcagacaaattttttaaaatagaaggc
tctggagggaaactgtaccagatttctacagcaatggaggacatggaagcctacactaag
ctaactgataatatctacctggaaattctgcactcaagttgtccagaactgaaggaggca
caagaaattttgcgtaaaatagaacgacgtgaattatacaagtttttaggagagactcaa
cctgaaacaatgagggaaattgttaagagtaatagcctggcagaaagcattgctaattcc
aagccagaaaaggatcctccagatgtggagctaaaggctgaagatttcatagtcgatgtt
atcaatatggattatggaatgaaagagcagaaccccattgataatgttctcttctattgc
aaggccgatccttcccaggcagtcaagatcagcaaagagcaggtttcaaagcttttaccc
atgacgtttgcagagcaggttatccgggtttattgcaaaagtcaggatccaaatattgtt
tcagctgcaaaacagtattttattcagtggtgtatagagaaggatttcaccaaaccacag
gatagtgacgtggttgcccctcacctaactccaatgaagaaaagctggaataactcgaga
gacggtgaacacaggacagcttcagaacccagctgcaaacaaaggcttgcttttcacaag
taa
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