KEGG   Opisthocomus hoazin (hoatzin): 104331049
Entry
104331049         CDS       T08436                                 
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha03420  Nucleotide excision repair
oha03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    104331049 (ERCC4)
   03460 Fanconi anemia pathway
    104331049 (ERCC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oha03032]
    104331049 (ERCC4)
   03400 DNA repair and recombination proteins [BR:oha03400]
    104331049 (ERCC4)
DNA replication proteins [BR:oha03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104331049 (ERCC4)
DNA repair and recombination proteins [BR:oha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104331049 (ERCC4)
SSDB
Motif
Pfam: ERCC4 HHH_5 RloB DUF4110
Other DBs
NCBI-GeneID: 104331049
NCBI-ProteinID: XP_009934624
LinkDB
Position
Unknown
AA seq 849 aa
MRENEYFIDQLRSDGVVHLPRRVTNDITNNTRYEFYTQGGVIFATSRILVVDFLTDRIPA
NLITGILVYKAHRIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFNTGFCHVERVMRNL
FVRKLYLWPRFHIAVNSFLEKHKPEVVEIHVSMTPAMLAIQTSILDILNACLRELKRYNP
ALEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCVT
FLNLLESLKASEKAFGENSGWLFLDASTSMFVNARARVYRIADEKLNQKSKVSEKSEVKK
ENELKRELVLESNPKWEALREVLKEIENENKNSEDLGGPGQVLICASDDRACAQLREYII
AGAEALLTRLYNKTFGKDEKAGEVWIKDRKPVKFKGNARPDSGPQAKKAKLAASSKQTKN
KKQQDRTIIEMIGKTEEEKREELEVEDKKELSSSQEGSVEEPIPEDFCMNLPSDCYYGIF
KHPLTIIHPLQGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYKASRPGKPLRVYF
LIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVIPEEREGRDETNLDLVRDAKPASASA
DTRKAGGQEQKSAQQTVIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERK
SVSDLIGSLNNGRLYTQCVSMSRYYKRPILLIEFDPNKPFSLIPRGSLHQEISSNDVTSK
LTLLTLHFPKLRILWCPSPHATAELFEELKQNHPQPDAETAMAVTADSEILPESDKYNPA
PQDFLLKMPGINAKNCRALMNQVKSIAELMTLSKDELARILGNAANATQLFDFIHLTYGE
AIAKGKSKR
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgagggaaaacgagtattttattgaccagctgaggtcggatggagttgttcatcttcct
cgacgtgttaccaatgacattacaaataatactcgctatgagttttacacacaaggagga
gtcatctttgcaacaagtcgaatccttgtggtagatttccttactgacagaattcctgca
aatctcattactggcattttggtatacaaagcgcacagaatcattgagtcctgtcaggaa
gcatttatcttgcgactttatcgccagaagaataagcaaggcttcatcaaagcttttaca
gataacgcggttgcatttaacactggcttttgccatgtggagagagtgatgagaaatctc
tttgtcaggaaactgtatctgtggccaagatttcatatagcagtgaactcatttttagag
aagcataaacctgaagtggtggaaatacatgtgtccatgacccctgctatgcttgctatc
cagacttcgatcctggacattttgaatgcatgtctgagagaactcaaacgttataaccca
gctcttgaagtagaagatctgtctttagaaaatgccattggtaaaccttttgacaagaca
attcggcactatttagatcctctctggcatcagcttggagctaagacaaaatctttggtc
caggatttgaagatactccgtactttgctactgtatctcacccagtatgattgtgtcact
ttccttaatcttctggagtcactgaaagcgagcgagaaagcttttggtgagaattcaggt
tggctgtttcttgatgccagtacttcaatgtttgtaaatgctcgagctagagtttatcgc
attgcagatgagaaactgaatcagaaaagcaaagtctctgaaaaaagtgaagtaaagaag
gaaaatgaactgaaaagggaattggttctagaaagtaacccaaaatgggaagctttgaga
gaagtactgaaagagattgaaaatgagaataagaacagtgaagaccttggtggtccaggg
caagtgcttatttgtgccagtgatgaccgagcttgtgcgcagctcagggagtatattatt
gctggagcagaggctttgctaacgaggctatataacaaaaccttcggaaaggatgagaaa
gctggagaagtgtggattaaggacagaaaacctgtcaagttcaaaggaaatgccagacca
gactcagggcctcaagccaaaaaagccaaacttgcagcttcttccaaacaaactaaaaac
aagaagcagcaagaccggactataatcgaaatgatcgggaaaactgaggaggaaaagaga
gaggagttagaggtggaagacaagaaggaattaagcagtagccaagaaggcagtgttgaa
gagcccattcctgaagatttctgtatgaatttaccctcagactgttactacggtattttc
aagcacccgctcacaattattcatccattgcagggttgcagtgatccctatgcactcact
cgggtactgcatgaagtagaaccaagatacgttgtgttatacgatgcagaacttactttt
gtccggcagctggaaatctacaaggcaagcaggcctgggaagcctttgagggtttatttc
ctcatatatgggggctcaacagaagaacaacgctacctcacagctctgagaaaagagaag
gaggccttcgaaaaactcattcgagagaaggccagcatggttattcctgaagaaagagaa
ggcagagatgaaacaaacttagacctcgtcagagatgctaagcctgcctctgcttctgcg
gacacgcgcaaagcaggtgggcaggaacagaagagtgcccagcaaactgtcatagtggat
atgcgggaattccgcagtgagctgccgtcgctgattcatcgtcgtggcattgacattgag
cctgttactctggaagtcggggattatattttaactccagatatctgtgtagagcggaag
agtgtcagtgacctgattggttccttaaataatggacgactgtatacgcagtgcgtttct
atgtcccgttactataagcgaccgattcttctcattgagtttgatcctaacaaacctttc
tccttgattccacgaggctctctccatcaggaaatttccagtaatgatgttacttctaaa
ctaacccttcttacgctccatttcccaaagttacgtatcctgtggtgtccctctccccac
gctactgcagagctgttcgaagagttaaaacaaaaccatccccagcctgacgcagaaacg
gcgatggctgtcacagccgattcggaaatccttcccgagtcagacaagtataaccctgct
cctcaggactttctgttgaaaatgccaggtattaatgcaaaaaactgccgtgccttgatg
aaccaggttaaaagcattgcagagctcatgacgctgtcaaaggacgagctcgccagaatt
ctgggtaatgctgccaatgccacgcagctctttgacttcattcacctgacctacggagag
gcaatagctaaaggaaaaagcaaaagatga

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