Opisthocomus hoazin (hoatzin): 104331240
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Entry
104331240 CDS
T08436
Symbol
BRAT1
Name
(RefSeq) BRCA1-associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oha03400
]
104331240 (BRAT1)
DNA repair and recombination proteins [BR:
oha03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104331240 (BRAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
RTP1_C1
TspO_MBR
Motif
Other DBs
NCBI-GeneID:
104331240
NCBI-ProteinID:
XP_009934830
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MANVSPPLQKPASFALTQTFCGIQCKPFQTPATEAYTPQSITTAEPSDPTVEVLQDNPCL
TEFITSVLALPEPSPSILSFTLQLAGILAASENRFQLLQQEQLLVRLFGRDGPLSSALWE
NASVRSGWVEGVHTMMHHQPALHFVCSDGGIDVIFTLQGDPSLFVASTXXXXXXXXXXAS
QLLVDMLTLSVESETTEPLSVKDCDWPVYAQVIIKHIEDSLQSSSVSHIEQSLKLLTSLF
ANCRATWTKVLWLGIAKQIESFLMEETVQAQHMLANLLLHVAWSPVLCDTEDSFWALVTT
ALQHLTPLHAGPLAVGILRLYKCPQDVRMQALTVLLQPMDCILRAASQPLEYAGLLDESV
SDPAAVESLLSSKSSCVTLLCQTLAHLEKLLSLMHLRVDLPYTSLLHSVMTILQFCNGFL
SPSSPLGSTISRILINSCRVQRSALDVLAALSNRKGCDTLIGSTFDVLQAYLESPNTSPT
VLKKTFQATSKWLVCLQELSCSNSQWQQTEKILEGVFLVLQKRLCSPCWEVRDSSLEFLT
VLIKCLRDQDEFRQSLLSSEVPRLTENLLEDPESYVRASAVTAVGHLAFITYFAPESSVV
GNQYNKEHTVAKLQEILSTDPEGFPRRAVISIFTEWLRQGCAGQLEDTEQFVSRVIQTVE
HDLDWEVRLCGLELVHIFCSQTICRLGHPDCMYDSIPSTVTSSIHQNELLQVFCRAKLFR
FLFQSLCDCDKPVGQRAWDILYSLKENVCPVCTLEDTQEIGDTPAGHGAAWLQMTLGEDS
LAQNFPTDGGNKVDFEDPESMMIALGAINVEELHDELNRSSDHVEKSPQSLLQDILATVG
TIEENEADCY
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtttcaccaccgctgcaaaaaccagcatcatttgctctaacacaaacgttc
tgtgggatacagtgcaagccatttcagactccagccacagaggcctacacacctcagagt
atcacaacagctgaaccttcagatcctaccgtggaggtgctgcaggacaacccctgcctg
acagagttcatcacctccgtgctagcactgccagagcccagtccgagcatcctctccttt
actctgcagttagctgggatacttgccgcttccgaaaaccgcttccagctcttgcagcag
gagcagctgttggtcaggctctttggtagggatgggcctctgagcagtgcactgtgggag
aatgcatctgtgcgaagtggctgggtggagggtgtgcacaccatgatgcatcaccagcct
gccctgcacttcgtctgcagtgatggaggcatagatgtgatcttcactctgcaaggggat
cccagcctgtttgtggcttccacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngccagt
cagctgctggtggacatgctcaccctctctgttgagtctgaaacaactgaacctctcagc
gtgaaggactgtgactggccagtgtatgcccaagtgattataaagcatatagaagattcc
cttcagtccagctctgtctctcacatcgagcagtcgttaaaactgttaactagtctcttt
gccaattgtcgtgctacgtggactaaagtactttggttaggcatagcaaagcaaatagaa
tcctttttgatggaagagactgttcaagcacagcacatgctggcgaatcttttgcttcac
gtggcatggtcccctgtgctttgtgacactgaagacagtttttgggcattagtgactact
gctttgcaacacttaaccccactacacgcaggtcctttggcagtgggaattctgaggctc
tacaaatgcccacaagacgtgaggatgcaggcgctgactgttctacttcagccaatggac
tgtattttgagagcagcctcccagcctctggaatacgcaggtttgctggatgagtctgtt
agtgatcctgctgctgttgaaagtctgctgtcctccaagtcatcgtgtgttactcttctg
tgtcagaccctcgctcatctggagaagctgctgtctctgatgcatttgcgagtggattta
ccctatacatctttgctacactctgtcatgacaatattacaattctgtaatggcttcctg
agtccatcttctcctctgggaagcacgataagccgaatcttgatcaattcctgcagagtg
cagaggtcagctcttgatgtcctagcagcactctcaaaccgaaaaggctgtgacacactc
ataggaagcaccttcgatgtccttcaggcatacctggagagtccgaacaccagccctact
gttctaaagaaaacatttcaagctacatccaagtggttggtgtgcttgcaggaactgtcc
tgctccaacagtcagtggcaacaaactgagaagattttggaaggtgtgtttctggtgctg
cagaagcgtttgtgcagtccttgctgggaagtaagagattcttctctggagttcctcact
gtcctgattaaatgcttgagagaccaggatgagttcaggcagtctctcctgtcttcggag
gtgccaaggcttacagaaaatcttcttgaagatccagaaagctacgtgcgagcgagtgct
gtgactgctgtgggacacttggccttcattacttactttgctccggagtcatctgtcgta
gggaatcagtataataaagagcacactgtagcaaagcttcaggaaatcttgtcaacggac
ccagagggctttcctaggagggctgtgatcagcatcttcaccgagtggctgagacaaggc
tgcgcaggtcagctggaagatacagaacagttcgtctctagagtgatccaaactgtggag
catgacttagactgggaagtcagactttgtggtttggaactggttcacattttctgtagt
cagacaatttgccgacttggccatcctgattgcatgtatgattccatcccatctacggtc
actagttccattcatcagaatgagttgctgcaggtattttgccgagcaaaactgttcagg
tttttgtttcagtctttgtgtgactgtgacaaaccagtaggtcagagagcctgggatata
ctgtatagcttaaaagagaatgtctgtccagtttgtaccctggaggatacacaagagatt
ggagacacacctgcaggacacggtgctgcctggttacaaatgacactaggggaagattct
ctggcccagaacttccccacagatggtggcaataaggtggattttgaagatccagagagc
atgatgatagctttgggtgcaataaacgtagaagagctacatgatgagctaaacagaagt
agtgaccatgtggagaaaagccctcagtccctcttacaggacatccttgctactgtaggg
accatagaggagaatgaagctgactgttactga
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