Opisthocomus hoazin (hoatzin): 104331764 Help Entry 104331764         CDS       T08436                                  Symbol SPG11 Name (RefSeq) LOW QUALITY PROTEIN: spatacsin   KO K19026   spatacsin Organism oha  Opisthocomus hoazin (hoatzin) Brite KEGG Orthology (KO) [BR:oha00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:oha03400]     104331764 (SPG11) DNA repair and recombination proteins [BR:oha03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      104331764 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Sacchrp_dh_C Motif Other DBs NCBI-GeneID:  104331764 NCBI-ProteinID:  XP_009935405 LinkDB All DBs Position Unknown AA seq 2043 aa AA seqDB search MLAFVPRAVTWPPSKPLQSDGTNLGGARQQWKQIPREAPQEVVRLECKLVTGVKAVFVVL TNDRGLTLALWDFESQDVTYYPCGKQSVYVDCSEETPLCLLLTERGLSLILFGLTQEEFL NRLMIYGSAGVVDSVCYLNGWERCSIPMHALEAGLKNRQLDTADLFLKSKENLFKLSAPC SGPEQSADSASQSYLKNLEELRPALNLLCSAIKENDMEPHSKHFSEQLLNLTLTFLSKQL DDIFVHTEEPDEFLQKGADILTDYIIRLRKFLRRYPQPQIDAVHAESQLDEDIPALEESH MWEKLTPEEVIAEAILTNKMPEAQTFFRMMCLLKDNTREASELLRNMGFDVKEELRKICF YTADKHVRDLLVKVLQEENYFSEKEKKMIDFVHQVESFYSESFQENKEIQSLSSFKNWRK EQDLSRHTAVLDSLLSCDRHRVHNRRVRVMFNWAQWWDELIQEMILLPRKPRQELKTCNP EVLWMHLTAQHDWLNVCAWIEESEPDQTACGQANWPPLTPDIIDRNMLCSSYMRNDILNK LARNGIFVFSELEDFEVLLQRLSYLGGVLQNPHPVPKYSAASGLDFHARFVLYCLEHNLQ YLLYTYLDYYSLSPSNCPVLDNKELHEAHPWFEFLVQCRGVASNPRDPKMIFQASLANAQ ILIPSNQASVSSMLLEGRTLLALATTMYAPGGIDQVLQNEDTEKPLKKVDPQLLKMALAP YPKLKAALFPPCTLHGILPPDISLYHLVQSLVPFDPTKLFGWQSTNTLAVSDASSDFPHF SSPELVNKYAVMERLDFLYYLHHGRPSFAFGTFLVQQLAKSKSPKQLIQQAGAEAHILAL SAFSVPSVVAACVCFLELLGLDSLKLRVDIKVANIIFSYRTRNEESQHNQIRESLVEKLA KLAGGEKAGAAEVLMSLEEAFWDAVERQGIQKTSSDSRRQWSLVMQFCKLHNIGLSTSYL KECAKSNDWLQFIIQTQLYSYQPDEVMSILQDFTPILQDHLKLALEKLPRVCPDAESREN SAASVLESKPADSLFQILLQCQGSSSPSRYLLTEGLREHAPVLSVLAACFQDANIVHCLC VWIITTVDGTARAEATNHIQSSAENHEWDLRDLSVIWKVFLRKQKSKTLLNGFQLFLKDS PLLYVLEVYELCMNCKKYNEAKTKLDKFQESLTKLKTEDKPAASELPVPWLESQALFLLE LMMQQCRTDYELGKLLQLFAAADNLLLDGPYVKKLCALSETLKDSSISISRSTLTSYNME TFQSECRSILEQLQEKGMFSLAREVAALAELPVDSVVTQEVLRDLLHLRDIGQWHQDQTR TEFWKKCNDSFMKNSISSKAASDFFFDQANTVFESLAPEKISSIMERHCIMERLLLLPLA GHWLAKNDSVSLHKLEEIEKEIWICRITQRTLSTDEGSGKSRFSSHVVVNKDLTFDNLAK EFSFSKLPALNTPKYLKLEGLAFRETQQTLTNDEEEALKFLIGCLLDEGSVHEASRVCQY FHFYDRDVSLVLHCRALASGETDLDKLHADIQTLLAAREQPSEGGASQQSRAPSASGLED WTHIVAPSLDDPVVVSLKALIDECVHGRNYCRQVLCLYELSKELNCSYSEMSAHDPEKVL RAILSSRQADRGRKAQAFISTQGLQPETVAELVAEEIMQELLASLEGKGQKHVFNPAAES QAFLQLAKLCQDRTLVGMKLLDKVSSVPRGELACITELLILAHSCFSLTCHMEGITRVLQ AARLLTDEHLAPSEEYGLVVRLLTGIGRYNEMTYIFELLHEKHYFEVLMRKKLDPSGTLK TALLDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAACIQLKLIESQPWEESLQDVAN LKRLLMKALTLFIDAAESYSKDSCVRQSLRCSRLTKLITLQLHFLNTGQSTMLINLNRQN LMDSITSLPRFYQAAIVAEAYEFVPDWAEVLYQQVITRGDFTYLEEFRQQRPLKPSMFEE IAKKVAQRPATDAALKNLKKLLAYCEDVYTHYRLAYDNKFYDVVNTLLKDAQTGCCLNDM LAN NT seq 6132 nt NT seq  +upstreamnt  +downstreamnt atgctggcttttgttccacgggctgttacgtggcccccctccaaaccgttacaaagtgat ggtacaaacctcggtggtgcaagacagcagtggaagcaaatccccagagaagcaccacaa gaagtggtgagactggagtgtaaactggtgactggagtcaaagccgtgtttgtagtatta acgaatgacagaggattgactcttgctctctgggattttgagtcgcaagacgtgacctat tacccctgtggcaaacagagcgtttatgtggattgcagtgaagagactccgttatgcctc ctgctgacagagcgtggtctttccttaattctatttggtttaactcaagaagagtttttg aatagattgatgatctatggcagcgccggagtcgtggattctgtttgttatctcaacgga tgggagcgatgttcaattccaatgcacgcactggaggcaggcttgaaaaatcgtcagcta gacacagcagacttatttttaaaaagcaaagaaaatctcttcaagctgtctgcaccctgc tctggacctgagcagtctgctgatagcgcatcccagtcttacttgaaaaatttggaagag ctgaggccagctttaaacttgctttgctcagcgatcaaagaaaatgatatggagcctcac agtaaacacttctctgagcagctgctaaacctcacgttgactttccttagcaagcaactt gatgacatttttgtgcacacagaggaacctgatgaattcctgcagaagggtgcagatatt ttaacagattacattataagactcagaaaatttctgaggagatatcctcaaccacaaata gatgcggtacacgcagaaagtcagcttgatgaagatatacctgcattggaagaaagccac atgtgggaaaaactgacaccagaggaagtcattgctgaggccatcttaaccaacaaaatg ccagaggcccagaccttcttccgaatgatgtgtcttctgaaggacaataccagagaggcc tcagaacttttaaggaacatgggctttgatgtgaaggaggaattgcgtaagatatgtttc tacacagctgataaacatgtacgagatttgttggtgaaagttttacaagaagaaaattat ttttctgagaaagagaagaaaatgatagactttgtgcatcaggttgaaagcttttactcg gaatccttccaagaaaataaagagattcaatctctttccagtttcaagaactggagaaag gagcaagacctttccagacatacagctgttctggactcattgctgagttgtgacagacat cgggttcacaatcggagagtcagagtgatgtttaactgggctcagtggtgggatgagctt attcaggaaatgattcttcttcccagaaaaccacgccaagaactcaagacgtgtaatcct gaggttctttggatgcacttgacagcccagcatgactggcttaatgtttgtgcatggatt gaagaatcagagcccgaccagactgcgtgtggacaagctaactggccccctcttactcca gacattattgaccggaacatgttatgtagtagctatatgagaaatgatatattaaacaag ctggctagaaatggaatttttgtcttctctgagttggaagattttgaagttctgctccaa agactgtcttaccttgggggagtactgcaaaatcctcacccggttccaaaatacagtgct gccagcggtttggacttccatgctcgtttcgtcctttactgtttagaacataatttgcag tatctgctatacacttacttagactattacagtttatctccttcaaactgccctgttctg gataacaaggaattgcatgaagcacatccctggtttgaattcctcgtgcagtgtcgaggg gttgccagtaatccacgagatccaaagatgatttttcaggctagtctagcaaatgctcag atcttgattcctagtaatcaagccagtgtgagtagcatgctactggaaggacgtacgcta ttagcacttgctactacaatgtatgcacctggaggtattgatcaggttcttcagaatgaa gatacggaaaaacctctgaagaaagtcgatccacagctcttaaaaatggcattggctcct taccccaaactcaaagctgctctctttcccccatgtactttgcatggaattttgccacct gacatctctctttaccaccttgttcagtcattagtgccctttgatcccactaaattattt ggctggcagtcaacaaatactcttgctgtatcagatgcatcaagtgactttcctcatttt tcatcccctgaactggtgaacaaatatgctgtaatggaaagactggattttttgtactat ttgcaccatggacgtccatcatttgcttttggtacatttttggtccagcagttagcaaag agcaaatcccccaaacagttgattcagcaggcaggagctgaagcccatattttagctctt tctgccttcagtgtaccttcagtagtggcagcctgtgtgtgctttctagaattactcgga ctcgacagcctcaaactcagggtcgatattaaagttgcaaacataattttcagttacaga actagaaatgaagaatctcagcacaatcaaatacgagaatctttggttgaaaagttagca aaattggctggtggagaaaaagccggagcagcagaagttcttatgtccttagaagaagcc ttttgggatgcagttgagcgtcaaggaatacagaagacgtctagtgactctagaaggcag tggtctttggtaatgcagttctgtaaactccataatatcggactgagcacatcttaccta aaggagtgtgccaaatccaacgactggctgcagttcatcatccaaacccagctgtacagc taccagccggatgaggtcatgtctatccttcaggatttcactcccattttacaagatcac ttgaagttggcgttggagaagttgccacgtgtatgtcccgatgcagagagtcgtgaaaac agtgctgccagtgtgttggagagcaaacccgcagacagtctctttcaaatccttcttcag tgccagggcagctccagcccttcacgttaccttttgaccgaaggactgagagagcacgct cccgttctgagtgtgttagcagcatgtttccaagatgcaaacattgttcattgtctctgt gtttggataattactactgtggatggtactgccagagctgaagcaacaaaccatattcaa agctcagcagaaaatcacgaatgggatcttcgtgacctgtcagttatctggaaagtcttt ttaagaaagcaaaaaagtaaaacactcctaaatggcttccagctctttttaaaggattcc cctttactgtatgtactggaggtgtatgaactatgtatgaactgtaaaaaatacaatgaa gctaaaactaaactggacaagtttcaggagagtctgacaaaacttaaaactgaagataaa ccagcagcttcagaactacctgtgccatggttggaatcacaagcactgtttcttcttgaa ttgatgatgcagcagtgtagaacggactatgaattaggaaagctcttacagctatttgct gcagcagataatctcctactggatggcccttacgtgaagaaactctgtgcactcagtgag accctgaaggattcctccatatcaatcagtcgctccaccctaaccagttacaatatggag acatttcagagtgagtgccgatcgattctggagcagctacaagagaaaggaatgttctcc ctggctcgggaggtcgcagcactagcggaactgcccgtggacagtgtggttacgcaagag gttctaagggatctgcttcatttgagagacatcggacagtggcatcaagaccagacaaga actgaattctggaaaaaatgcaatgacagcttcatgaaaaattcaatctctagcaaagct gcatctgattttttttttgatcaggcaaacacagtatttgaatctttagctcctgagaag ataagcagcattatggagagacattgcattatggagagacttttgttgcttcccctggct ggccattggctagccaagaatgactcagtgtcactgcacaaattagaggaaatagagaag gagatctggatttgtcgcatcacacaacgaacattgtccacagatgaggggtcaggcaag tcgagattttcctcccacgttgtagtgaacaaggatcttacctttgataacttagctaag gagttttctttttcgaagctacctgctctgaacacaccaaagtacttaaaactagagggt cttgcattcagagagactcaacagaccttgactaacgatgaggaggaagcactcaagttt ctgatcggctgccttcttgatgaaggaagcgtgcatgaagccagccgtgtttgccagtat ttccatttctacgacagagatgtttcgctggtattgcattgcagagccctggcctcgggg gagactgatctagacaagttacacgccgatattcagactctccttgcagcaagagagcag ccctctgaaggcggtgcgtctcagcagagcagagccccgagcgcatcaggcttagaagac tggacacacattgtggccccatctctagatgatccagttgttgtcagtctgaaggctctc atagatgaatgcgtccatgggagaaactactgcagacaggttctctgtttatatgaactt tctaaggaattgaactgctcctacagtgaaatgtcagcccacgaccctgagaaagttctt cgagccattctgtcgtcccgccaggcagacagaggcaggaaggctcaggcgttcatcagc acgcagggtctccagcctgaaaccgtggcagagctggtggctgaagaaatcatgcaggag ttactggcatcgttggaagggaaagggcagaaacacgttttcaaccctgcagctgagagc caggcattcctacagcttgctaagctgtgccaggatcgtacgttggttggcatgaagtta ctggataaagtttcctccgtgccacgtggggaactggcgtgcattacagaattgctgatt ttggctcacagttgctttagtttgacttgccacatggaagggatcaccagagtcctccaa gcagcacggctgctcacagatgaacatctggcacccagtgaggagtacggcctcgtggtc cgtctgctcacgggaatcggcagatacaacgagatgacctacatatttgagctgctgcat gagaaacactactttgaagtgctcatgagaaagaagttagacccaagcgggacgctgaag acagctctgctggattacatcaagcgctgtcgcccaggggacagtgaaaagcacaacatg atagccctctgcttcagtatgtgccgagaaatcggggagaatcacgaggctgctgcctgc atacagcttaaactgattgaatctcagccttgggaggagtctcttcaggatgttgcaaat ttaaagaggctgctgatgaaagctctgactctctttattgatgcagcagaaagttattct aaggactcctgtgtccggcagtccttgcgctgcagtcggctaacgaagctgatcaccctc cagctgcacttcctcaacactggtcagagcaccatgctgatcaacctgaaccggcagaac ctgatggactccatcacctccttgcctaggttctatcaggcggccattgtggctgaggct tacgagtttgttcccgactgggctgaagttctgtatcaacaagtgatcaccaggggagac ttcacttacttagaggaattcagacaacagagaccactgaagccaagcatgtttgaggag attgccaagaaagttgcgcaacgcccggctactgatgctgctctgaaaaacctgaagaag ctgctggcttactgtgaagatgtctacacccactacagactggcttacgacaacaagttc tacgatgtggtaaacacgcttctgaaggatgcgcagacgggctgttgccttaacgacatg ttagcgaactag

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