Opisthocomus hoazin (hoatzin): 104332144
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Entry
104332144 CDS
T08436
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oha03009
]
104332144 (DCAF13)
04121 Ubiquitin system [BR:
oha04121
]
104332144 (DCAF13)
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
90S particles
Other 90S particles
104332144 (DCAF13)
Ubiquitin system [BR:
oha04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104332144 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
KNTC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104332144
NCBI-ProteinID:
XP_009935840
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSPQFPDISKAEEITASQGNRFQYLTTLAFSSIPLKRTSNNFRVISGFINLERVPRNYDP
ALHPFEVPREYVRALNATKLERVFAKPFLSSLDGHRDGVNCMAKHPKSLSTVLSGACDGE
VRIWNLTKRQCIRTIQAHEGFVRGMCARFCGTSFFTVGDDKTVKQWKMESPEYGEEEEPI
HTILGKTVYTGIDHHWKEAVFATCGHQVDIWDEQRTSPMCSLTWGFDSISSVKFNPIETY
LLGSCASDRNIVLYDMRKSTPLKKVILNMRTNTLCWNPMEAFIFTAANEDYNLYTFDMRF
LESPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVIT
VKWTSDNKYILCGSDEMNIRLWKANASEKLGVLAPREKAAMNYNQKLKEKFQYHPKIRRI
AQHRHLPKSIYCQIKELRIMREARRRKELNRRKHSKPGSVPFVSERKKHIVAVVK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcagttcccggacatttccaaggctgaagagatcacagcctctcagggtaac
cgcttccaatatttgaccactctcgcatttagcagtatacccttgaaaaggacatcaaat
aatttcagagttatttcaggctttattaacttagagcgtgttccaaggaactatgaccct
gcattgcatccatttgaagttccacgagagtacgtaagagctctgaatgcaacaaagcta
gaacgtgtgtttgcaaaaccctttcttagctcccttgatggccacagagatggcgttaat
tgcatggccaaacatccaaagagtttgtctacagtgctgtctggagcttgtgatggagag
gttagaatttggaacttaaccaaacgacagtgtattcgtactatacaagcccatgaaggc
tttgttcgaggcatgtgtgctcgtttctgtggtacatcattctttactgttggcgatgac
aaaactgtgaagcagtggaaaatggagagcccggaatacggagaagaagaagaacctatt
catacaattcttggaaagacagtgtatacaggaattgatcaccactggaaggaagctgtt
tttgccacctgtggccatcaagtggacatttgggatgagcaaaggacaagtcccatgtgt
tctctgacatggggttttgatagcataagcagtgtaaaatttaatcccattgagacatac
cttttgggaagctgtgcttctgacagaaatattgtgctatatgatatgagaaaatcaact
ccattaaagaaggttatcttgaacatgaggacaaatacactgtgttggaaccccatggaa
gctttcatttttactgcagcaaatgaagattacaacttatatactttcgatatgcgtttt
cttgaatcacctgtgatggtgcatatggatcacgtgtctgctgttcttgatgtggattat
tcacccactgggaaagaatttgtctctgccagctttgataagtctgtccgcatatttcct
gtagacaaaggtcacagcagggaagtgtatcatacaaagcgaatgcagcatgtcatcact
gtaaaatggacttcagataacaaatacattctgtgcggctcagatgagatgaatattcgt
ctgtggaaagctaatgcttctgaaaaactgggagtgcttgcaccacgagaaaaggcagct
atgaattacaatcagaagctgaaggagaagttccagtatcacccaaagatcagacgcata
gctcaacaccgtcacttgcctaaaagtatatattgccaaatcaaggagctgcgtatcatg
agagaagctcgtcggcgaaaggaactgaatcgtcgtaagcacagcaaaccaggatctgtg
ccatttgtgtcagagaggaagaaacatattgtggcagtagtgaaataa
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