Opisthocomus hoazin (hoatzin): 104332308
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Entry
104332308 CDS
T08436
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oha03036
]
104332308 (CHD7)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104332308 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
104332308
NCBI-ProteinID:
XP_009936016
LinkDB
All DBs
Position
Unknown
AA seq
3012 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPSLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISSAPGNGIASPHSQYHNPPVPQVPHGSGAG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQPQPAQPPQAPSGP
PGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLS
HVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRS
QTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSN
SGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPG
SAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMR
PNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHH
QPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQP
QQKKKKKKNNHIAAEGPSKGFGNEDFPGGLDSQNLSRNSVDCSQEEKKKKKKPKAKKEPK
DPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASNKKTDSETSAAKKKVNKG
KEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAA
GRDSPSNTSQSEQQESVDAEGPVVEKIMSSRTVKKKMENGEEVEIEEFYVKYKNFSYLHC
QWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDNG
EPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSES
SREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGP
FLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFH
AIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI
NGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRC
LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV
LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTI
TIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRV
RKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGW
GRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRA
LVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKV
LLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIGV
FKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYK
PTRTPFKDEIDEFANSPPEDKEESIEIHSNKHSESNAELGQLYWPNTSTLTTRLRRLITA
YQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVS
TFGIIFDPVKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDL
STMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKD
LLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRATGNVNTVSSVNPLGVGCSQTPPI
VPSTPVQEEKTTEQTESKVEGSENPAAKEKSGSKEETENADKDTKPDCDAEAEPGSVKCE
LKDIEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEGRAVSQGKNFDEESNASMS
TARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRR
QMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASVSGSEDITASPQLSKEDALNLSVP
RQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSN
FSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRK
NVEGLDLLFMSNKRTSLAVEDAEVTKAFEEDIEALPARNIPSPGQLDPDTRIPVINLEDG
TRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLD
INTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTEIVKQSGFVPE
SMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTS
LQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLN
NPITATTGNATTASGQGETEDGASKAEEKKNENEEEIKDSEKSTDTVSATDSANGSVSAA
TAASTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALA
GLQNAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSLD
GGEEIENNENDE
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccgggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggtctcggagaatgtggatatcctgaaaatacagtaaatcctatggggcagcaa
atgcccatggatcaaggatttccctctttacagtcgtctcttcatcatccccctgcaaat
caaaatcaagccaagttgacccattttgatcactataatcagtacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcagtgcccctgggaacggtatagcgtct
cctcattcacagtatcacaaccctccagttcctcaggttcctcatggcagtggtgctggt
ggtcagatgggagtctatcccagcatgcagaacgaaagacacgggcaacccttcgtagac
agtggctccatgtggggaccacgggcggttcaagtgccagaccagataagagcaccgtac
cagcagcaacagcagcagcaaccgcagccagcacagccgccacaggcaccctccgggccc
cccgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggtgat
ttttcaatgcagcagcacggtcagccgcagcagcagagaatgaaccagttttctcaaggc
caagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtct
catgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaattt
caccaccatccccccactgctctccatggagaatcagtagcccacagtcccagattctcc
cctaatcctccccagcagggtgctgttaggccacaaacacttaattttagttctcggagc
cagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagt
aaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaat
aacactccaatgaatcagtctgtaccaagatacccaaatgctgtcggatttccatcaaac
agtggtcaaggactaatgcaccagcaacccatccaccctagtggctcacttaaccaaatg
aacacgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatg
tcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagacctggt
agcgctggaataccaatggaagttggcagttatccaaatataccccatcctcagccgtca
caccagccccctggtgccatgggaattggacaaaggaatatgggcccccgaaacatgcag
cagaatcgtccgtttatgggtatgtcttcaacaccgcgggagatgggtgggcacatgaga
ccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgacttata
tctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgtcct
cccatgcagcctcatccagggatacatcatcagtcttcaccacccccacatcctcatcat
cagccctgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtcctt
cagcattctccgtcagaaccctttttagagaaaccagtgccggatatgactcaggttagt
ggaccgaatacccagctagtgaaaagtgatgattatctgccatcaattgagccgcagcca
cagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaaggt
tttggtaacgaagactttcctgggggacttgacagccagaatctaagcaggaactcagtg
gattgctcccaagaagagaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaag
gatcctaaagaacccaaggaaaagaaggaacccaagacgcccaaagtccccaagacccct
aaagagccaaaggaaaagaaagcaaaaaacaccacgccaaaacccaagaccagcaaaaag
gctagtaacaagaaaacagattcagaaaccagtgctgcgaagaaaaaggttaacaaggga
aaggaaggttctgaaaactcagatttggaaaaaactccgccaccatcacctcatcctgaa
gatgaagatgacccaggggttcagaagcgacgctccagcaggcaggtgaagaggaagcgt
tatacagaagacctggagttcaagatttcagatgaggaggccgatgatgctgatgctgct
ggaagagactctccttcaaacacttctcagtcagagcaacaggagtctgttgatgctgaa
ggtcctgttgtggagaaaatcatgagtagccgtacagtcaagaaaaagatggagaatgga
gaggaggtagaaatagaggaattctatgtaaagtacaaaaacttttcttaccttcattgt
cagtgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaagagg
tttaaggcaaaacagggccagaacaaattcctttcagaaattgatgatgagctttttaat
ccagattatgtggaagttgatcgaatcatggatttttcacgcagcacagatgataatgga
gagcctgtaacacattatctggtgaaatggtgttcgcttccttatgaagacagcacttgg
gagctcaagcaagacatcgaccaagctaagatcgaagaatttgagaaactgatgtctagg
gagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagt
tccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactgg
cttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttggga
aagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcct
ttcttggttattgcaccgttgtccacaattcccaactgggaaagggagttccgcacctgg
acagagttgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttg
tatgaaatgtatttcaaagatccacagggtcgtgtgataaaggggtcctacaagttccat
gccattatcacaacatttgaaatgatcttgactgactgcccagagctgcgtaacattcca
tggcgttgcgtggtcatcgatgaggcccacaggctgaaaaacaggaactgtaagcttttg
gaaggactcaagatgatggacctggaacataaagtgctgcttactggaacccctttgcaa
aatacagtggaagagctgtttagcttgcttcacttcttggaaccaggtcgcttcccatca
gaaaccacattcatgcaagaatttggtgatctgaaaactgaagaacaggtgcaaaaactc
caagctattttgaagccgatgatgctgagacgtcttaaggaggatgtagaaaagaacctg
gcccccaaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatactat
cgtgctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaatgta
cctaatcttttaaacactatgatggaactaagaaaatgctgcaatcatccgtaccttatt
aatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctcca
gattttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctg
ctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgc
ttggacatactggaagactacctcattcaaagacggtacccatatgaacgaattgatggc
cgagtaagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattctgat
aggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgctgct
gatacctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagca
cgatgtcacagaataggacagagcaaatcagtgaaaatttacaggttgataacaaggaat
tcttacgaaagggaaatgtttgacaaagctagcttgaagcttggccttgataaggctgtg
ctacaatctatgagcggaagagaaaacgctacaaatggggtgcaacagctttctaagaaa
gaaatagaagatcttcttcgaaagggggcatatggtgctctgatggatgaggaagatgaa
gggtctaagttttgtgaagaggatattgatcagattctcttaaggcgaacacacacaatt
actattgaatctgaaggaaaaggctcaacatttgcgaaggctagttttgttgcatctggg
aacaggacagacatttccttggatgaccctaatttttggcagaagtgggcaaagaaagct
gagctggatattgatgctttaaatggaaggaataacttagttattgatacaccaagagta
agaaagcaaaccagactctacagtgcagtcaaagaggatgaactgatggagttttcagac
ctggaaagtgattctgaagaaaagcctagcacaaagccccgcagacctcaggacaaatca
cagggttatgcaagaagtgaatgtttcagggtggagaagaacttgttggtttatggctgg
ggtcggtggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagat
gtagaaaccatctgccggactatcctggtatattgtcttaatcattacaaaggggatgaa
aatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagct
ttggttaatcattccggtctgtctgcaccagtgcccagagggaggaaaggcaagaaagta
aaagcccagagttcacagccaatgctgcaagatgccgactggctcacaacctgtaatcca
gatgtattatttcaagaagacagctataggaaacatctcaaacatcactgtaataaggtc
ctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagcagac
aagatcttagagggtgctgactcaagtgaagtggatgtatggatacccgagccattccat
gctgaagttcctgcagactggtgggataaggaggcggataaatcccttttaattggagta
ttcaaacacggttatgagaagtacaattctatgcgagctgatccagcgctgtgctttctg
gaacgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagacatg
ttagcagatggcggtgatggcggtgaatttgacagagaggatgaagatccagaatataag
ccaaccagaactcctttcaaggatgagattgatgaatttgcaaactcacctccagaagat
aaagaggagtccatagaaatacattcaaacaaacacagtgaaagcaatgctgagttaggc
caactctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcc
tatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgc
aggagacgtcggcctcgggaagaagtgagggcactagaagcagaaagggaagctataata
actgaaaaacgacaaaaatggacaagaagagaagaagctgatttttatcgtgtggtgtct
acttttggaattatttttgatcctgtgaaacatcagtttgactggaatcaattcagagca
tttgctaggcttgataaaaagtccgacgaaagcttggaaaagtattttaacggctttgtg
aatatgtgcagacgagtgtgccgaatgccagtcaagccagatgatgaaccacctgatctt
tccactatgattgagccgatcacagaggaacgtgcttctagaactttgtatcgcatagaa
ttgttgcggaaaatccgtgaacaggttctccatcacccacagttgggggagaggctaaaa
ctttgccaaccaagcttggacctgccagagtggtgggagtgtggtaaacatgacaaagac
ttactgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaatgat
cctgaactctcttttcttgaggctcacaaaaactttgctcaaaacagagcgacgggtaat
gtgaatactgtctcttctgtaaaccctctgggtgttggctgcagtcaaacaccacctatt
gtcccatccacaccagtacaagaagaaaagacaacagaacaaacggagtctaaagttgaa
gggtctgaaaatccagcagccaaagaaaagtctggcagcaaagaggagacagaaaatgca
gataaggacactaaaccggactgtgatgctgaggctgagcctggatctgttaaatgtgaa
ttgaaagatatagaaatgagtacagacgtagacccaaaatctatttctgagaaaggttcg
gaagaagacgaagaggagaaattggatgatgatgataaatcggaagaatcctcccaacct
gaaggtagagcggtttctcagggtaagaattttgatgaagaaagcaatgcctctatgagt
accgcgagggatgaaacacgcgatggattctacatggaagatggggatccctctgtggtt
cagctgcttcacgagagaacgtttgccttctctttctggcctaaggaccgagtaatgatc
aaccgattagacaacatctgtgaagcggtgctgaaagggaagtggccagtaaataggcgc
cagatgtttgatttccaggggctcatacctgggtacactccaacagctgtggacagccct
ctacaaaaaaggagctttgcagagctctccatggttggtcaagccagcgtcagtggcagt
gaagatatcactgcttctcctcagttgtcaaaggaagatgcactcaatttatcggttcca
cgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaagagg
agaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatgga
caagaaaaggttgtagatttatcaaaggcctcacgagaggcgacaagttctacctcaaat
ttttcatctgttacttcaaagtttatcttacctaatgtctccacacctgtgtctgatgcc
tttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatcta
ctaaatggctctttaatagatggagaaccgcccatgaagaggaggagaggaagaaggaaa
aatgtggaagggcttgatctgttgtttatgagcaacaaacggacgtcgttggctgtagag
gatgcagaagtgaccaaagcttttgaagaagatatagaagccctaccagcaaggaacatt
ccatctcctggtcagctggacccagacactcgcatccctgtaatcaatctagaggatggg
accaggctggtgggagaggatgctcctaaaaacaaggatttagttgaatggcttaaattg
catcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttt
tccccatttcagaagccgaaacaaaaacgacacaggtgtcgaaaccctaataaactggat
ataaacaccttgacaggagaagaaagggtacctgttgtaaataagcgaaatggaaagaag
atgggtggagctatggcccctccaatgaaggacttgccaagatggttggaagaaaatcct
gaatttgctgttgctccagattggaccgagattgttaaacagtctggttttgttccagag
tccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaaga
ggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatca
acttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcacaagc
ctccagaacctacagaacctgcagtctctccagctcgcaggcctcatgggcttcccgcca
gggctagcaacagctgctgctgctgggggggacgctaaaaatccggctgccatgttgcct
ctgatgttgccagggatggcaggattgcccaatatgtttggactaagcggattgttgaat
aacccgataacggctactactggaaatgccactactgcttccggtcaaggagagactgag
gatggcgcttcaaaagctgaagagaagaaaaatgagaatgaagaggagatcaaagactct
gagaaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgctgct
actgcggcgtctaccgccactgccaccactaccaccacgaccaacactggattgcccaca
aaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctatcca
tcaatgtttctacctccaggactggggggattgactctgcccggtttcccagcactagca
ggacttcagaacgcagtgggctccaacgaagagaaggctactgacaaaactgaaggaact
gcctttaaagatgaagaaaatctcgaaggcagtgatgcagaggagagccttgataaaact
gcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcacttgat
gggggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
