Opisthocomus hoazin (hoatzin): 104332589
Help
Entry
104332589 CDS
T08436
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oha03016
]
104332589 (TRMT13)
Enzymes [BR:
oha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104332589 (TRMT13)
Transfer RNA biogenesis [BR:
oha03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104332589 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
104332589
NCBI-ProteinID:
XP_009936305
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MGTDAWARPRRRGQDAAVRPPSDCEEEEEEEEAGLPAERAARKTGSGCPAPGRCAYFVEK
KKRFCKMIVAPGRRFCGEHGQQEEENDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPK
PVYFVQDINAGLKDVAEIPEEQVPISSLSKEKLENLIIKLKKASNGLEFHLKKQILSHQA
LQEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGRCFVEFGAGRGKLSHWVDVALQN
AENVQFLLVERATTRFKVDGKHKRRDSVFERLQVDIKHLCLGKVPVLEKEKLPVVGIGKH
LCGAATDLALRCLVESYTPCCDGENEEPAPKRSRADKTEVASNNSADNESNKEDCKPVAG
IVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQRMSSWATCGMRETTTKASTSEESE
DQTNDSEDHEQTFSKTESGSETLQGILTVEERKDIGCLCKLLIDHGRIEYLQQRGYKAAL
QYYTESAVSLENVLLTAVPSPSLLPEPST
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgacgcgtgggctcgcccacgccgcaggggccaggatgccgcggtaaggcca
ccatcagactgcgaggaggaggaggaggaggaggaggcgggcctgcccgcagaaagggcg
gcgcggaagacaggaagcggctgtccggctccagggcgatgtgcctacttcgtggagaag
aagaagcgcttctgcaagatgatcgtggctcctgggaggcggttttgcggagagcatggg
cagcaggaggaagaaaatgacagaaagagaattccgtgccctcttgatccaaaacacact
gtatatgaagaccaactacaaaagcatttaaaaaaatgtaattcaagagagaagccaaag
ccagtctactttgttcaagatattaacgcaggtttaaaagatgtagcggaaataccagaa
gaacaagtacctatctcttctctatccaaagaaaagctggagaacttaattatcaagttg
aaaaaagcaagtaatggcctggaatttcaccttaagaaacaaatactgtcccaccaggct
ctacaagaagccttaaatgacccaaagaatggggaatctgctttcaaacacttgaaacaa
caggcttctattttaggtaacatggaaaaattacatttacttggcccaggaagatgtttt
gttgagtttggagctgggcgaggaaagctgtctcattgggttgatgttgccttacagaat
gctgaaaatgttcagtttttgcttgtggaaagggcaactacaagattcaaggtggatgga
aaacataaaaggagagattctgtatttgaaaggcttcaagtggatattaaacacttatgt
ttaggtaaggtacctgttttggagaaggaaaaactaccagtggtaggaattgggaagcat
ttgtgtggtgctgcgacagatcttgctttgagatgcttggttgaaagttatacaccttgc
tgtgatggagaaaatgaagagcctgcaccaaaacgctctagagctgataagacagaggtg
gcttctaacaattctgctgataatgaaagcaacaaagaagactgtaagcctgtagctgga
attgttattgcactgtgctgccatcataagtgtgactggacacattatgtaggcagagag
ttcttcaaatcagtaggacttggaccagtagaatttcattattttcagagaatgagtagc
tgggccacttgtggcatgagagaaaccacaaccaaagcttctacaagtgaagaaagtgaa
gatcaaactaatgattcagaagaccatgagcaaacattcagcaagacggagagtggttct
gaaactttacaagggatacttactgttgaagaacgaaaggatataggttgcctctgtaaa
cttctgattgatcacggacggattgaatatttacaacaacgaggatacaaggctgcacta
cagtattatacagagtctgctgtgtccttggagaatgtcctgttgacagctgtcccaagt
ccatctttgttgccagagccaagtacatga
DBGET
integrated database retrieval system
