Opisthocomus hoazin (hoatzin): 104332607
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Entry
104332607 CDS
T08436
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104332607 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oha03021
]
104332607 (TAF5L)
03036 Chromosome and associated proteins [BR:
oha03036
]
104332607 (TAF5L)
Transcription machinery [BR:
oha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104332607 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
104332607 (TAF5L)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104332607 (TAF5L)
STAGA complex
104332607 (TAF5L)
TFTC complex
104332607 (TAF5L)
SAGA complex
104332607 (TAF5L)
SLIK complex
104332607 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Ge1_WD40
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
104332607
NCBI-ProteinID:
XP_009936322
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNETNGLEPSEVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCS
EDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLRI
YAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGK
YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRN
TYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQESQEH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcagaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctggcagagccacagcaatatgaagtacaatttggacgattacgcaacttt
ctcacagattcagattctcagcacagccacgaagtgatgcctcttctgtatcccctcttc
gtctacctccatctgaacatggtccagaatggcctgaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacctgaagctccgggcttttctggac
aacaagtacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacatccacctggatgtgcag
cccgccaagaggaccgactaccagctctacgccggcgggagctcctcgcgcaacgagacc
aacggcctggaacccagcgaggtgccggcttccattctgcagaacgaggcggcgctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaacgaccatctgt
ttctacgccttctataacacggagcagttgctgaacaccgcagagatttcgccaaatagc
aagctgctcgctgctgggttcgacaattcgtgcgtgaagctgtggagcctgcgttccagg
aagttaaaatctgagccccacctcgttgatgtgtcccgcatccgcctggcttgtgacatc
ctggatgaggaggaagaggacgacagcgcaggcacagaaatgaagatcctgagaggacac
tgtgggcctgtgtacagcacgaggttcctgtcagacagttcgggactcttatcttgttct
gaggacatgtccatcaggtactgggacctcggaagctttacaaacactgtgttgtaccaa
ggacatgcctatcctgtctgggatctggatatcagcccctgcagcctgtactttgccagc
ggttcccacgatcgcactgcgaggctctggtcgtttgatcggacgtacccgctgcgaata
tacgcaggccatttggcggacgttgactgtgtcaagttccaccccaattccaactacttg
gcgacgggctccacggacaaaaccgtgcgcttgtggagcacccagcaaggcaactcggtg
cgtctcttcaccgggcaccgcggccccgtgctagcgcttgcgttttctcccaacggtaag
tacctggcgtcggcaggtgaagaccagcggctaaagctgtgggacttggcgtcaggaact
ctttacaaagaactgagggggcacacggacaacataaccagccttacttttagccccgac
agtagtttgattgcttcggcgtcgatggacaattcggtccgggtctgggacattcggaac
acttactgcaacgcccctgcagatgggtcttccagtgaactggttggtgtatataccgga
caaatgaataatgtactgagcgtacagtttatggcctgtaatcttcttctagtgactgga
attgcacaagaaagtcaggaacattaa
DBGET
integrated database retrieval system
