Opisthocomus hoazin (hoatzin): 104332637
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Entry
104332637 CDS
T08436
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104332637 (TRIM71)
04121 Ubiquitin system [BR:
oha04121
]
104332637 (TRIM71)
Enzymes [BR:
oha01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104332637 (TRIM71)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104332637 (TRIM71)
Ubiquitin system [BR:
oha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104332637 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
104332637
NCBI-ProteinID:
XP_009936355
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSLEQAQAGAEQVEMKAKVVQS
EVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQXXX
XXXXTMDILLARDRRLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSD
QQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDS
DGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACD
ISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNH
RVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMD
RPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctttatctacctccaagatgccctccaggactccagg
actctcaccattcagctcctggcagatgctcagcaaggacgacaggctattcaactctct
ctcgaacaagcccaggctggggcagagcaggttgagatgaaagcgaaggtggtacagtct
gaagtcaaagcagtgactactagacataagaaggccttggaagagcgggagtgtgagctg
ctctggaaggtggaaaagattcgtcaagtcaaggctaagtcactctacttgcaagttgaa
aagttacgtcagaacctaaataagctggacaacaccattagcgctgttcagnnnnnnnnn
nnnnnnnnnnntaccatggatattcttctggctcgggaccgcaggcttgctcaggtgcag
gagctgaagaatgtgagaggccttctccagccgcaggaagatgacaggatcatgttcact
ccccctgaccaggcattgtatatggccattaaatcaatgggctttgtcagcagcggggct
tttgctcctctgaccaaagccaccggggaaggcctcaagcgtgcactgcagggcaaagtg
gcctctttcacagtgataggctatgaccatgatggcgagcctcgcctttcaggaggtgac
atgatctctgcagtggtgatgggcccggatggaaacctttttggggcagacgtcagtgat
cagcagaacgggacctacctggtcagctaccgtccacagctagagggagagcacctggta
tctgtgatgatgtgcaaccaacacatcgagaacagccccttcaaagttgtggtgaagtct
gggcgcagctacataggcattgggctgccagggctctccttcggcagcgagggagatagc
gacggcaaactctgccgcccctggggggttagtgtagacaaagaaggctacatcattgtt
gccgaccgcagcaataaccgcatccaggtgttcaaaccatgcgggaccttccaccacaag
tttggcacgctggggtcccggccgggccagttcgatcgacctgctggcgtggcctgtgac
atctcgcgtaggatcgttgtggctgacaaggacaatcatcgcatccagatcttcacgttt
gaggggcagttcattctgaagtttggagagaaaggaacaaagaacgggcaattcaattac
ccctgggatgtcgccgtcaacgcggagggcaagatcctggtctccgacacaaggaaccat
cgcgtccagctgtttgggcccgacggcgtgtttcttaacaagtacggcttcgaaggggca
ctctggaagcactttgattcccccagaggtgtgactttcaatcacgagggccacttggta
gtgactgacttcaacaaccatcgccttctggtcatccatcccgattgccagtcagcgcgc
tttctgggctcggagggcactgggaacggccagttcctgcgcccgcagggggtggcggtg
gatcaagaggggcgcatcatcgtggctgattccaggaaccaccgggtgcagatatttgag
tcgaatggtagctttttatgcaagtttggcactcagggaagcggctttggtcagatggac
cgtccttcaggtatagccgtcacccctgacggcatgattgttgtggtcgactttggaaac
aatcgaattctcgtcttctaa
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