Opisthocomus hoazin (hoatzin): 104332659
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Entry
104332659 CDS
T08436
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104332659 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104332659 (CNOT10)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104332659 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
DUF6058
TPR_7
TPR_17
TPR_MalT
DUF948
Motif
Other DBs
NCBI-GeneID:
104332659
NCBI-ProteinID:
XP_009936379
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MRWPSAVTHSVVDGPLLDQGTEKHEGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLN
TLQDINKDDYKITLNTAVAEFCKSNQTTTDSLRQTLNQLKNQVHSVVEEMDGLDDVENSM
LYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHL
LAVLEKMISQGNNNSKNGKNEVTNSNNTSKDSSNQKAESGALIEVAKSKIHQYKVRAYIQ
MKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTG
ECLRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCT
LLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSE
QETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNA
LLLLPEDQQEPKQENGSKTSNQLGGNTESSESSEACSNKSHEGDKFIAAPPSSPLKKQEL
ENLRCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRIS
DAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFN
LGSAYCLRSEYDKARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQL
LPSVKTLSDMRKKPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggccgtcagcagtgacgcactcggtagttgatggccctctgctagatcaaggt
accgagaaacatgaaggagcaggtacttctgggattactgatcaggaaaaggaattgtcg
agcagtgcattacaagcttttctggctggaaactacgatgcttgtttacaacacctaaat
acccttcaagacataaacaaagatgactataaaataactttgaatactgctgttgcggag
ttctgtaaaagtaaccagactacaacagacagtttgagacagacccttaaccagctgaag
aaccaggttcactctgttgttgaagaaatggatggtttagatgatgttgaaaatagtatg
ctgtactacaatcaagctgttattttgtatcatctgcgtcagtatactgaagctatatca
gttggggagaagctgtaccagtttatagagccttttgaagagaagtttgcccaggctgtg
tgcttcttgcttgtagacttgtacctgctaacttaccaagctgagaaagccttgcatctg
cttgctgttctggagaaaatgatttcacagggcaacaataacagcaagaatggaaaaaat
gaggtgactaatagtaataatacaagtaaagattcctcaaatcaaaaagctgaaagtgga
gctttaatagaagttgctaaatctaagatacatcagtataaggtgagagcctatatccag
atgaagtcactaaaagcgtgcaaaagggagatcaagtctgttatgaatacagctgggaat
tcagctccttctctctttcttaagagcaattttgaatatttgaggggcaattatcgtaaa
gcggtgaaacttctaaacagtgcaaacattgctgaacatccaggtttcatgaaaacaggt
gaatgcttaaggtgtatgttctggaacaatcttggctgcatccactttgcaatgggaaag
cacaatttaggaattttttactttaaaaaagccttgcaagaaaacgataatgcgtgtgcg
cagctaggaacgggcagctcagatccaggtaaaaaattttcggggagacccatgtgtaca
ctgctgaccaacaaacggtatgagctgctctacaattgtggaattcagctcttgcatatc
gggaggcccttagctgcctttgagtgcctgatcgaggcggtccaggtttatcactcaaac
cctcgtctttggctgcgaatagcagaatgctgcattgctgccaataaagggacatcagaa
caagagactaaaggtcttcccagcaaaaagggaattgtgcaatctatagtaggtcaaggc
taccaccgcaagatagtcctagcatcccagtcaatacagaatgtcgtttataatgatggg
cagtcctcagcaatacctgtagcaagtatggaatttgcagcgatttgtctaagaaatgcc
ttgctgctactgccagaagatcagcaggagccaaagcaggaaaatggatctaaaactagt
aatcagctgggggggaatacagaaagcagtgaaagcagtgaagcgtgcagcaataaaagt
catgaaggggataaatttattgcagctccaccttcttcacctttgaagaaacaggaatta
gaaaatttaaggtgctcaatacttgcctgcagtgcttacgtggctctggctttgggtgat
aaccttatggcgttgaatcacgcagataaacttcttcagcaaccaaagctgtcagggtct
cttaagtttcttgggcatttgtacgcagcagaagctctcatctctctagacagaatatcc
gatgccatcactcacttgaaccccgagaatgtcactgatgtttcccttgggatctcttca
aatgagcaggatcaagggtctgacaaaggagagaatgaggcgatggaatcttctggcaag
cagaccccacagtgttaccctagttcggtcacatctgcgcgaacaatgatgttgtttaac
cttggcagtgcttactgcttgaggagtgaatatgacaaagctcgcaagtgtcttcatcag
gctgcttcgctgatccaccccaaagagatccctccagaggctattctgctggctgtctat
ctggaattgcagaatggtaacacacagctggcactgcagatcatcaagagaaaccagctg
ctcccttctgtgaaaacgctctccgacatgcggaagaaacctgttttccagcccgtccac
tcgatccagcccattcagatgccggctttcaccactgtgcaaaggaagtga
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