Opisthocomus hoazin (hoatzin): 104332714
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Entry
104332714 CDS
T08436
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104332714 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104332714 (PAN3)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104332714 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
104332714 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
104332714
NCBI-ProteinID:
XP_009936450
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLANPSASEFIPKGGS
TSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHTSPAPR
RRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPVTGMVF
PNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADIPAVPAEVDS
YHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVD
MWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAYFTKRKWG
QHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTRLRVNC
VGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACNSLSGIQRENLQKAMELVTI
NYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGR
LFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCL
NKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatagcagcagctcccctagccttctcaatgacagtgccaagcagtacgcaggc
catgatccactaacttcaccaaattcatccttgtttaatgactttgctgccctcagcgtg
tctcaaaggaggaagctggcaaatccttctgcaagtgagtttattcctaaaggaggatca
acctccaggctgagtaatgtatcccagtcaagtatgtctgccttctctcaagccttgttc
tctcacccctccatgggaagtcctgctactgctgggttagcaccaggaatgtcgctgtca
gcaggatcttcccctcttcattcccccaaaataactcctcatacatctcctgctcctcga
agaagaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcttct
gttgctaatgctgtctctcagcctccgtctactggccaggtgatccagaaggaaacagtg
ggtggaacgacatacttctacactgatacaactccagcacctgtcacaggaatggtattt
ccaaactaccatatttaccatccagctgcacctcacgttgcttacatgcagccaaaagca
aatgcaccttccttcttcatggcagatgagctcagacaggaactgatcaacagacactta
ataactatggcccagattgatcaggctgatattcctgcagttcctgcggaagtggacagc
taccatagtctctttcctttggaaccactgccaccacccaatcggatacagaaaacaagc
aactttgggtacattacgtcatgctataaagctgtaaatagtaaagatgacctgccatat
tgccttcggaggatacatggttttcgtcttgttaacacaaagtgtatggtattggttgac
atgtggaaaaaaattcagcactcaaatatagtaactttgcgtgaagtgtttaccactaaa
gcatttggagaacattctctggtgtttgcatatgattttcatgctggaggagagaccatg
atgagcagacacttcaatgatcctagtgctgatgcctatttcacaaaacgaaaatgggga
cagcatgatggacctctaccacggcagcacgctggattgcttccagaatctttgatatgg
gcatatattgtgcagctcagctctgcattgcggaccattcatacagcaggactggcgtgc
cgagttatggatccaacaaaaattctggtaacgggcaaaacaaggttacgagttaattgt
gttgggatctttgatgttttgacatttgacaacagtcaaaataatccgctggcattaatg
gctcagtttcagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgc
aattctttatcaggaattcagagagagaatttgcagaaggcaatggaactggtgacaatc
aactattcctctgatctgaagaatctgattttgtatttgctgactgaccagaacaggctt
cgcagtgtaaatgatatcatgcctatgattggtgcgcgattctatactcagttggatgct
gctcaaatgcgaaatgatgttatagaggaagaccttgcaaaggaggtgcaaaatggaagg
ttgttcaggcttctagcaaaattgggaacaatcaatgagaggccagagtttcagaaggac
ccaacgtggtcagaaactggagacaggtatttactaaagctctttcgagatcaccttttc
catcaggtgacagaagcgggtactccttggattgacctcagtcacattatctcatgtctt
aacaagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagt
gtacttgtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactg
attgcagccgcaaatggtcagttgtag
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