Opisthocomus hoazin (hoatzin): 104332787
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Entry
104332787 CDS
T08436
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03030
DNA replication
oha03420
Nucleotide excision repair
oha03430
Mismatch repair
oha03440
Homologous recombination
oha03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104332787 (RPA1)
03420 Nucleotide excision repair
104332787 (RPA1)
03430 Mismatch repair
104332787 (RPA1)
03440 Homologous recombination
104332787 (RPA1)
03460 Fanconi anemia pathway
104332787 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oha03000
]
104332787 (RPA1)
03032 DNA replication proteins [BR:
oha03032
]
104332787 (RPA1)
03400 DNA repair and recombination proteins [BR:
oha03400
]
104332787 (RPA1)
Transcription factors [BR:
oha03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104332787 (RPA1)
DNA replication proteins [BR:
oha03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104332787 (RPA1)
DNA repair and recombination proteins [BR:
oha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104332787 (RPA1)
MMR (mismatch excision repair)
104332787 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104332787 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
CATSPERD-E_C
DUF4939
IBR
Motif
Other DBs
NCBI-GeneID:
104332787
NCBI-ProteinID:
XP_009936531
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQGETVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLSAQ
CICQVNRFIVNSLKDGRRVVILMDLDVLKTADKVGGNIGNPVPYNEGQGQQRSSAPAANP
APSKPQQQNGKLSVAGPAAPKYHAPSNQFGKVSASSSVKTPGGSQAKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYY
FTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFEFVSISDLENTPKDSI
VDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQPVI
AIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAA
GTNTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQNAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYSKRLIASIRRNAQL
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggagaccgtctccaagcccgtgctgcaagtcatcaacacacgggctattgct
acagggaatgggccaccgcgttaccgagtgttgatgagcgacggggtgaacacgctctct
tcattcatgttggcaacacagctgaactctctggtggaagaagaacgcttatcagcccaa
tgtatttgccaggttaacagattcattgtcaacagcctgaaagatggaaggagagtggtt
atactgatggatttagatgttctgaaaactgctgataaggttggtgggaatattggcaat
ccagtgccatacaatgaagggcaagggcagcaacgttcttcagctccagcagcaaaccca
gcacccagcaaaccacagcaacaaaatggcaaactgtcagtagcaggtcctgctgctccg
aagtaccatgctccctcaaaccagtttggtaaagtgagcgcttccagctcagtgaagaca
ccagggggatcacaggccaaagtagtgccgattgccagcttgaacccttaccaatctaag
tggaccatttgtgctcgtgttacccaaaaaggccagatccgcacatggagcaactcccgt
ggtgaaggaaagctcttttctatagagctagttgatgaaagcggtgagattagagctact
gcattcaatgatcaagcagacaagttctttccactcatagaattgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactat
gagattacattcactaatgagacttcagttgtgccctgtgatgatgcccagcatcttcca
tctgttcagtttgagtttgtatccatctctgacttggagaacacacccaaagactcaatt
gttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacagtgaaagct
aacaatagggaagtatcgaagaggaacgtgcatctgatggatacatcagggaaactggtg
acagctacgctgtggggaaatgaggctgaacagtttgatggttctagacaacctgtgata
gccatcaaaggagcccgagtctctgattttggtggtagaagcctgtctgtcctgtcctcg
agtacagttgtcatcaaccctgatagcccggaggcttttaagctccgaggatggtttgac
tctgaggggcagcttctggaatgtgcctcgatctctgatgtgaggggtgggccagcagct
gggacgaataccaattggaaaactttgtttgaagccaaatctgagaacttggggcaagga
gataaggcggattattttagctgtgtgggcacagttgtacatctgcgcaaagagaactgt
atgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaaaacgga
ctgtatcgttgtgaaaagtgtgatcgtgaattccccaacttcaagtaccgcatgatgctt
ctggtgaccattgcagactgtctagagtatcagtgggtgacttgtttccaagagtcagca
gaattcattcttgggcaaaacgcggctttcttgggagaactgaaggaaaagaacgaacag
gcatttgaagaagtgttccaaaatgcaaacttcaacacgtatgagttcaggatccgagta
aagctggagacttacaacgatgaatctcgcattaaggctacagcagtggacgttaaacct
gtgaactacagagaatacagcaagaggttgatcgctagcatcaggagaaacgctcagcta
gggtga
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integrated database retrieval system
