KEGG   Opisthocomus hoazin (hoatzin): 104332902
Entry
104332902         CDS       T08436                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
oha  Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:oha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oha04131]
    104332902 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oha04147]
    104332902 (COPA)
Membrane trafficking [BR:oha04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104332902 (COPA)
Exosome [BR:oha04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104332902 (COPA)
  Exosomal proteins of bladder cancer cells
   104332902 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd TPR_COPA_B Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd NBCH_WD40
Other DBs
NCBI-GeneID: 104332902
NCBI-ProteinID: XP_009936658
LinkDB
Position
Unknown
AA seq 1185 aa
MCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTT
FFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTV
RVWDISGLRKKNLSPGAVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPL
IVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMS
KRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDR
FLRQLDFNSSKDVAVMQLRSGSKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKD
ADSQNPDAPEGKRSSGLTAVWVARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYA
GTGNLLLRDADSITLFDVQQKRTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLE
SLCNIHENIRVKSGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVY
CLDRECRPRVLTIDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVAL
HFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKN
FDRLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAY
LTAATHGLDEEAESLKETFDPEKETIPDIDHNAKLLQPPAPVMPLDTNWPLLTVSKGFFE
GTIASKGKGGALAADIDIDTVGTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGG
WEVEEDLDLPPELDVPAGPTGAAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETA
MRLLHDQVGVTNFGPYKQLFLQTYARGRTTYQALPCLPAMYGYPHRNWKEAGLKNALPAV
GLKLNDLIQRLQLCYQLTTAGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICRE
YIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFK
TAATFARRLLELGPKPEVAQQTRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRG
KPVEKCPLSGACYCPEFHGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgtgcaccctgatcgacaagttcgacgagcacgacggacccgttcgaggtattgatttc
cacaaacagcagcctctgttcgtttctggaggtgatgattacaaaataaaggtctggaat
tacaagttgcgccgttgtctcttcactctgctcgggcacttggattatattcgcactacc
ttcttccaccatgaatatccttggatcttgagtgcttctgatgaccagaccattcgggtt
tggaactggcagtccagaacttgtgtttgtgtgctgacaggacacaaccactatgtgatg
tgtgcccagtttcacccttctgaggacctggtagtgtcagccagcctggatcagactgtg
cgcgtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggagtcg
gatgtcaggggaataacaggggtggatttgtttgggacgacagatgcggttgtgaagcac
gttctggagggccacgatcgtggggtgaactgggctgccttccaccccacgatgccgctc
attgtgtcgggagccgacgatcggcaagtgaagatctggcggatgaacgaatcaaaggcc
tgggaggttgacacatgccgagggcattacaacaacgtctcgtgtgctgtctttcacccg
cggcaggaactaatcctcagcaattcagaagacaagagcatccgtgtctgggatatgtct
aaacgcacgggtgtccagacctttcggcgtgatcacgatcgcttttgggtattggctgct
catcccaacctcaacctctttgctgcaggccatgacggcggcatgattgtgttcaaactg
gagcgtgagcgcccagcttacgctgtgcacgggaacatgctgtattatgtgaaggaccgt
ttcctccgccagcttgatttcaacagttcaaaagacgttgctgtcatgcagctgcgcagt
ggttccaagttccctgtgttcaacatgtcgtacaacccagctgagaacgctgtccttctc
tgcacaagagccagcaacttagagaacagtacttatgacctgtacaccattcccaaggat
gcagactcccagaatccagatgcccctgaagggaagcgttcctccgggctaacagctgtg
tgggtagcgcgaaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaaaaac
ctgaagaatgagatcacgaagaaggtgcaggtgccgaactgtgatgagattttctatgct
ggcacagggaacctgttactgagagacgcagactccatcaccctctttgacgtgcagcag
aagcgaactctggcctcagtgaagatctccaaggtgaaatacgtcatctggtcggctgac
atgtcccatgtagctctgctggcgaagcatgccatcatgatctgcaacagaaagctggag
tcgctgtgtaatatccatgaaaacatccgtgtcaagagcggtgcctgggatgaaagcggt
gttttcatctataccaccagcaatcacatcaaatatgctgtcaccacaggggatcatgga
atcatccgcaccctggacctgcctatctacgttacccgcgtgaaggggaacaacgtgtac
tgcctggacagagagtgccgccccagggtcctcaccattgaccccacagaattcaaattc
aagctggcattgatcaacagaaagtatgacgaggtgctgcacatggtgaggaatgctaag
cttgtgggccagtccatcattgcctacctgcagaaaaagggctacccagaggtggccctg
cactttgtcaaggatgagaagacccgtttcagcctggcactggagtgtggcaacattgag
attgctctggaagcagccaaggctctggatgacaaaaattgctgggagaaactgggagaa
gtggcgttgctgcaaggaaatcaccagattgtggagatgtgctaccagcgcaccaagaac
tttgataggctctccttcctctacctcatcactggcaatctggagaagcttcggaagatg
atgaagatagctgagatccgtaaagatatgagtggccactaccagaatgccttgtatcta
ggagatgtggcagaaagagtgaggatcctgaagaactgtgggcaaaagtccctggcctat
ctcacggctgcaactcatggtctggatgaggaagctgaaagcctgaaggaaacatttgat
cctgaaaaggaaacgattccagacattgatcacaatgcaaagctgctgcagccgcctgct
cctgtcatgcctctggataccaactggccattgctgactgtctccaaggggttcttcgaa
ggaacaatcgctagcaaaggcaaaggaggtgccttggctgctgatattgatatcgacact
gttggcactgaaggctggggagaagatgcagagttgcagctggatgaagatggctttgtg
gatgctggagagggctttggagaggaaggtctaggtaaaggacaggaagaaggaggtgga
tgggaagtcgaagaagatttggatcttccccctgaactggatgttcctgctggtcccaca
ggagcagcagaggatggattctttgtgccacccaccaagggcaccagcccagctcaggtg
tggtgtaacaattctcagcttcctgttgaccacattctggcaggctcctttgagacagca
atgagactcctccatgatcaggtaggagtaacaaactttggaccctacaagcagctgttc
ctgcagacctatgcccgtggccgtacgacctaccaagccctgccatgtctccctgccatg
tatggttacccacatcgcaactggaaagaagctggcttgaagaatgccctccctgccgtt
ggactgaaactcaacgacctgatccagcgcctgcagctgtgttaccagctcactacggct
ggcaagtttgaggaggccgtggagaagttccgctccatcttgctcagcgtgcccttgctg
gtggtggacaacaagcaggagatcgcggaggcccagcagctgatagccatttgccgggag
tacattgtaggactctccatggagactgagcggaagaagctgcccaaagagaccctggag
cagcagaagcgaatctgcgagatggccgcctatttcacccactccaacctgcagcctgtc
cacatgatcttggtgctgcgtactgctctcaacctcttcttcaaactcaaaaacttcaag
acagctgctacttttgcccgccggctgctggagctgggtccaaagcccgaggtggcccag
cagactcgcaagatcttgtcggcgtgtgagaagaatcccactgacacctaccagctcaac
tacgacatgcacaacccctttgacatctgtgccgcctcttaccgacccatctatcgcggc
aaacccgtggagaagtgtcccctcagcggagcctgctactgccccgagttccacgggcag
atctgccgcgtcactacggtgacggagatcggcaaagatgtcatcgggctgcggatcagc
ccgctccagttccgctag

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