Opisthocomus hoazin (hoatzin): 104332949
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Entry
104332949 CDS
T08436
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104332949 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oha03041
]
104332949 (DDX5)
03009 Ribosome biogenesis [BR:
oha03009
]
104332949 (DDX5)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104332949 (DDX5)
Spliceosome [BR:
oha03041
]
Complex A
U1 snRNP components
U1 related factors
104332949 (DDX5)
Complex B
104332949 (DDX5)
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
Pre-60S particles
Helicases
104332949 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
P68HR
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104332949
NCBI-ProteinID:
XP_009936711
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MTRNIMAFRFHFVEAAKTGVALASDYKLQLGRHWYLQLKFGVPRFGGSRGGPLSGKKFGN
PGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEVEQYRQSKEVTVRGHNCPKPIINF
YEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHI
NHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLER
GVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL
MWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEI
MSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILI
ATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDL
ISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGKRGGFSSFRERENFERTYGALG
KRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGFRAGNPAGAYQNGYEQQYGSNIAN
MHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaatatcatggcctttcggttccattttgtggaagctgccaagacaggtgtt
gccttagcttctgactataagttgcagctaggcagacactggtatctgcaacttaagttt
ggagtcccacgttttggaggaagtagaggtggacctctctctgggaagaaatttggaaac
cctggggaaaaacttacaaaaaagaaatggaatttagatgagctgcccaagtttgagaag
aacttctatcaagaacatcctgatgtagttagacgtactgtgcaagaagttgaacaatac
agacaaagcaaagaagtcacagttaggggccataactgtccaaaaccgattataaatttc
tatgaagctaactttcctgcaaatgttatggaagtaattcagaggcagaacttcactgaa
ccaactgctattcaagcacaaggttggcctgttgcattgagtggactggatatggttgga
gtggcacagactggatcagggaaaacgctgtcttacttgttgcctgctattgtgcatata
aatcatcagccattcctggagcgaggagatggacccatttgtcttgtgctggcaccaact
cgtgagctggctcaacaagtgcagcaggtagctgctgaatacagcagagcatgccgtttg
aagtctacatgtatttatggaggtgctccgaagggaccacaaattcgtgacttagaaaga
ggtgtggaaatctgcattgcaacacctggaaggcttatagacttcttagaagctggaaag
accaatctcaggagatgtacttaccttgtcctcgatgaagctgacaggatgcttgacatg
ggatttgaacctcagatcagaaaaattgtggatcagataagacctgacaggcagactctg
atgtggagtgccacatggccaaaggaagtaaggcagctggctgaagactttttgaaagaa
tacgtacacatcaacattggtgcattagaactaagcgcaaaccacaacattcttcagatt
gtggatgtgtgtcacgatgtggagaaagatgacaagcttattcgtttgatggaagaaata
atgagtgagaaggagaataaaacaattgtttttgtggaaaccaaaagacggtgtgatgat
cttaccaggaaaatgaggagagatgggtggccagcaatgggtattcatggtgataaaagt
cagcaggagcgggactgggttctaaatgaattcaaacatggaaaagcaccaatcctgatt
gctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaattat
gactaccctaactcctcagaggactatatccaccgaattggacgaactgcccgcagtacc
aaaacaggcacagcatacacattctttactcctaacaatattaagcaagtaaatgacctc
atctctgtgcttcgtgaggctaatcaagccatcaaccccaaattgcttcagttgattgaa
gacagaggttcaggtcgttcccgaggtgatcgacgtgacagatattctgcgggcaaaagg
ggtggatttagtagttttagagagagggagaactttgagagaacctatggtgcattagga
aagagagactttggagcaaaaactcaaaatggggcctacagtgcccaaagtttcagtaat
ggaactccatttggaaatggctttgcagctgcaggcatgcaggccggcttcagggctggg
aaccctgcaggagcttaccagaatggctatgagcagcagtacggaagtaatattgcaaat
atgcacaatggcatgaaccaacagcagtatgcatatcctgccactggtgctgctcctatg
ataggttacccaatgccaacaagttactctcaatag
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