Opisthocomus hoazin (hoatzin): 104333052
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Entry
104333052 CDS
T08436
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104333052 (ZC3H12C)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104333052 (ZC3H12C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104333052
NCBI-ProteinID:
XP_009936817
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MSVCFPANEYGTLYIQGYKKNSKVESSTCSSFMGLKDHLGHDLGHLYVGSPGTQINAVVP
WSMAEKPTMDKVNSRKEDVDKETSEETSGSSSCDSEESTNSDNDSERLNNSASKSHLLPK
THRQLCRSPCLEPHILKRNEILQDFRIEEAQIVPKEVKKPPDVVKEYQTKLEFALKLGYS
EEQVQLVLNKLGTDALINDILGELVKLGNKTETDQTVTNANTSVMRETSSIESQRSESPL
QEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDVTVFVPAWRK
EQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQ
PCPYGKKCTYGHKCKYYHPERGNQPQRSVADELRAMSRSTAAKTTSEGGLIKSNSVPCST
KNDGTSELKRAAPKRQSDPSIRTQVYQDLEEKLPTKNKLETRSVPSLVSIPSSSAAKPQS
TAPLTNGLPSGVHFPPQDQRPQGQYPTVMMATKNHGTPMPYDQYPKCESPVDVGYYSMLS
AYSNLSISGPRSPERRFSLETDYRISSVASDCSSEGSVSCGSSDSYVGYSDRSYMSSPDP
QLEENLKCQHMHPHGRLNTQPFLQSYHEPLARVPSYSHEEPKHHHKPPIPYMAVHLQHPT
VGARSSCPNDYSASQSSAHSKTMHLGRALVSTRIDSISDSRLYDNSPLRHRKPYSGQDGL
GSWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQFAFQSLPEQQDQTWRVPYCGVPQDPPRH
QDTREKIYVNLCNIFPPDLVRIVMKKNPYVTDAQQLAAAILVEKSQLGY
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtgttttccagcaaacgaatacggaacactttatattcagggatacaagaaa
aacagcaaagtggagtcaagtacatgcagcagcttcatgggcttgaaggatcatctgggg
catgacttaggccacctttatgtggggagccctggaacacaaataaatgcagttgtacct
tggtcaatggcggagaagccaacgatggataaggtgaattctaggaaagaagatgtagac
aaggagacatctgaagagacttctggaagctccagctgtgactctgaagaaagcacaaat
tctgataatgattcagagagactgaataattctgcatcaaaatcacatttattgcctaag
actcaccgacagctgtgccgatctccttgcttagagcctcatatactaaaaagaaatgaa
atcttgcaagactttaggatagaagaggctcagatagtacctaaggaagtcaaaaagccc
cctgatgtggtgaaagaatatcaaaccaaactggagtttgcacttaagttgggttactca
gaagagcaggttcaacttgtactaaataaacttggtactgatgctttaataaatgatatt
ttgggagaacttgtcaaacttgggaataaaactgagaccgatcagactgtaactaatgct
aacactagtgtaatgcgtgaaacgtcttccatagagtctcagaggtcagagtctccactg
caggaggatgtgacagaggatggtgacaacctgaggccaatagttattgatggcagcaat
gttgcgatgagccacgggaacaaagaagtattttcatgtcgaggaatcaagttggcggta
gactggtttttggaaagaggccacaaggatgttacagtatttgtgccagcatggaggaaa
gaacagtcgagacctgacgctcttatcacagatcaagaaatcttgcgtaaattagaaaag
gagaagattcttgtgtttacaccatcccgccgagtgcaagggagaagggtggtatgctac
gatgaccgatttatagtgaagttggcctttgagtcagatggcatcattgtttctaatgat
aactacagggatctcgctaatgagaagcctgaatggaagaagttcatagatgaacgcttg
ctgatgtattcatttgttaatgacaaatttatgcctcctgatgatcctcttggccgccac
ggtccaagtctggacaattttcttaggaagaagcctattgtgccagaacataagaagcaa
ccgtgtccatatgggaagaaatgtacctatggacacaaatgcaaatactatcatccagaa
agaggaaatcagcctcagcgatctgtagctgatgaacttcgtgccatgtctagaagcaca
gctgccaaaactacaagtgaaggaggactaatcaaaagcaatagtgttccctgtagtact
aaaaatgatggcacttctgagctgaagcgtgctgctccaaagaggcaatcggatcctagt
ataaggactcaagtctatcaagacttggaggaaaagcttcccaccaaaaacaaattggaa
accaggtctgtaccttctttagttagtataccaagttcctctgctgcaaaaccccaaagt
actgcacctttaacgaacggccttccatccggagttcacttcccacctcaggatcagaga
ccacagggacagtatcctacagtgatgatggcaaccaaaaatcacggaacgccaatgcct
tatgaccagtatccaaaatgtgagtctcctgtggatgtagggtattactctatgctgagt
gcatattcaaatctaagtatatctggtccacgaagtcctgaaaggcgcttctccttggag
acagattacaggattagctctgtagcttctgattgcagcagcgaagggagcgttagctgt
ggcagtagtgattcctacgtgggttacagcgatcgctcttacatgagttcgcctgaccca
cagctagaggagaacttgaagtgccaacatatgcacccccatggccgccttaacactcag
cccttcctacagagctaccacgagcctctcgcacgagtgccaagctatagtcacgaagaa
ccaaagcatcaccacaaacctccaattccgtacatggctgtgcatctacagcatccgaca
gtcggtgctcgttctagctgtccgaatgactactctgcatctcagagttcagcacattca
aagaccatgcatctggggagagctctcgtgtccacgagaatagacagcatttcagactcg
cgtttatatgataattctccattaagacacagaaagccttactctggccaagatgggctt
ggaagttgggataggcagagttacgggatggatgcgtatggctaccgccagacctactcc
ttgccgagtaaccccacacagccatgttacgagcagtttgccttccaaagcttacctgaa
cagcaggaccagacctggcgcgtaccttactgtggagtccctcaagaccctccaaggcac
caggacacccgggagaagatttacgtaaatctctgcaacatcttcccccctgatcttgtg
cggattgttatgaagaagaacccttacgtgacggacgctcagcagctcgcggcggccatc
ttagtggaaaaatctcagctaggttattga
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