Opisthocomus hoazin (hoatzin): 104333061
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Entry
104333061 CDS
T08436
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104333061 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104333061 (EXOSC10)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104333061 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
104333061
NCBI-ProteinID:
XP_009936829
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MHFYHVVFWYALGTVVAATKASSGLPQPGDEYDFYQSFAGFRAYCKTQGDHLLDCMSKVM
QYHGCRSHLKDCSKATDLEDKFDMLVDSNDTILERVGMLLDEASGVNRNQQPVLPAGLQP
PQTIISSWNRKMGASHKKTQSGTFRLLHAKNTSRPQLRFREKIDNSNTPFVPKLFVKPNA
LKPLPEALTKSGRERKERPEDLDVPAALADFIHQQRTQQTEQEMFAHPYQYELEHFSPPD
GVLKKPEPQMYRPIEETPCHFITTLDELVELNEKLMNCKEFALDLEHHSYRSFLGLTCLM
QISTRAEDFIIDTLELRSDMYILNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDT
HQAARLLNLGRHSLDHLLKLYCNVNADKKYQLADWRIRPLTEEMMQYARGDTHYLLYVYD
KVREALWERGNEQPTQLKVAWQRSKDICLKKYIKPLFTDESYLELYKKQKKHLNTQQLAA
FRLLFAWRDKMARQEDESTGYVLPNHMLLKIAEELPKEPQGIIACCNPVPPLVCQQINEL
HLLIQQAREMPLLKSEDALAVKMTSSPPIPEKLENTFFGPHDCSRIPTDDFQNNSALEPA
PVLEHSLFSDSEMTMNIQGVQPESTCLLATATASMFSECDEDEGKKTALTPAQQKVQRIM
ETFENPFRLYLPAEQNPVYVSQFAKYDPSSKIYEISSRWKLMRRARVKEAKGDTKKKAAQ
QSAARDQAQKVYKEATENIVSVRQQAMQEQANKKRESVMSETGTELPKPEKKQPKASQQP
EKLEAPKQFTPFNYSKSNFKVFAGSSKSKQSPQFDPAKQAYAGKRFAGANKIQQSGNRSM
SYLAGKAERSSRYHWPKR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctaccacgtggtattctggtatgcacttggcacagtggtagctgcgacaaag
gcatccagtgggcttccccagcctggcgatgagtacgacttctaccaaagcttcgctggc
ttcagggcctactgtaaaacacagggtgaccatctccttgactgcatgagcaaggtgatg
caataccatggctgccgtagccacctgaaagattgcagcaaagcgacagacctggaagat
aaatttgatatgctggttgactccaatgacaccattcttgaaagagtgggtatgttgctg
gatgaagcatcaggagtgaacagaaaccagcagccagtcctccctgctgggttacagccc
ccacagacgatcatttctagctggaaccgcaagatgggagcatctcacaagaaaactcaa
tctggaaccttccgactgcttcatgccaagaatacctctcgaccacagcttaggtttcgg
gaaaagattgacaattccaacactccctttgtacctaaactttttgtcaagccaaatgct
ttgaaacctttgcctgaagccctcacaaaaagtggacgagaacgaaaggaacggcctgaa
gacttggatgtaccagctgctttggcagacttcatacaccagcagaggacgcagcaaact
gagcaagagatgtttgctcacccttaccagtacgaactggagcatttttctccgccagat
ggagttctcaagaaaccagaaccccagatgtacaggcccatcgaggaaacgccctgtcat
tttatcaccacactggatgagctggtagaactaaatgaaaagcttatgaactgtaaagaa
tttgcactggacttagagcaccattcctacaggagcttcctgggcttgacatgtctgatg
cagatttccacccgagcagaagacttcattattgatacactggaattgcgcagcgacatg
tacattctcaacgagactttcacagacccagcaattgtcaaggtccttcatggtgctgat
tcagacgtggaatggctgcagaaggacttcggcctctacttggtgaacatgtttgatact
caccaagctgctcgtctcctcaatcttggcaggcattccttggaccacttgctaaagctg
tattgcaatgtcaatgctgacaagaagtaccagctggctgactggaggatacgccctttg
acagaagaaatgatgcagtacgcccgtggtgacactcactacttgctctatgtctatgat
aaagtgagggaggcactgtgggagagagggaatgagcagcccactcagctgaaggttgcg
tggcaacgcagcaaggacatctgcctgaagaaatacatcaagcccctctttacagatgaa
tcctaccttgagctctacaagaagcagaaaaaacatctcaacacacagcagctagcagcg
tttaggttgctgtttgcatggagagacaagatggcacgtcaagaggatgagagtacagga
tacgttctacctaatcatatgctattgaagatagcagaggagctgcctaaagaaccccag
ggcatcattgcctgctgtaatccagtcccaccactagtttgccagcagattaatgaattg
catcttctcattcagcaggcccgcgagatgcctcttctcaagtcggaggatgctttggca
gtcaagatgacatcatctccacccatccctgagaagctggagaataccttctttggacca
catgactgttcccggattcctacggatgattttcagaacaattctgccttagagcctgca
ccagttttggaacatagtctcttttcagacagtgagatgacaatgaatattcagggtgtt
cagccagagtcaacatgtcttcttgctactgccactgccagcatgttcagtgaatgtgat
gaagatgaaggaaagaagacagctttaacccctgcacagcagaaagttcagcgtataatg
gagacctttgaaaatccgtttagactgtatctacctgcagaacagaatcctgtctatgtc
tcacaatttgcgaagtatgacccttcatcaaaaatttatgaaatcagcagtcgatggaag
ttgatgcgtcgggcacgagtaaaggaggccaagggtgacaccaaaaagaaggcagcccag
cagtcagctgctcgtgaccaggcacagaaggtgtacaaagaggcaacagaaaatattgtg
tctgttcgtcagcaagctatgcaggaacaagctaataagaagagggagagtgtcatgagt
gaaacaggaacagagttgccaaaaccagagaagaaacagccaaaagcctcccagcaacca
gagaagctggaagcaccgaagcagtttaccccctttaattacagcaagtccaacttcaaa
gtgtttgcgggaagcagcaaatcgaagcagtcgccacaatttgatcctgccaagcaagct
tatgccggcaagagatttgctggagctaacaaaattcaacaatctggaaaccgaagcatg
tcctacctggcggggaaagctgagaggagttccaggtaccactggccaaagagataa
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