Opisthocomus hoazin (hoatzin): 104333290
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Entry
104333290 CDS
T08436
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oha03041
]
104333290 (DDX27)
03009 Ribosome biogenesis [BR:
oha03009
]
104333290 (DDX27)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104333290 (DDX27)
Spliceosome [BR:
oha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104333290 (DDX27)
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
Pre-60S particles
Helicases
104333290 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104333290
NCBI-ProteinID:
XP_009937070
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MAKDEVSCTKQDFLRSAWAAALRQLRGKRAATTLDEKIEKVRQKRKFQEREAKQTKLRDE
DVETENNQTKKRECEDFGRDEEEEDAESQYSLDDETIFTKADTVKVKERKRSKKGEMETE
SFFEDASQYDDNLSFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATG
TGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVG
GLDVKTQEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQM
KEIIRLCSNHRQTMLFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPN
REGDREAIVSALLTRTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEA
LRRFKDEQIDILVATDVAARGLDIEGVKTVSNFTMPNTTKHYVHRVGRTARAGRAGRSVS
LVGEEERKMLKDIVKTAKTPVKARILPQDVILKFREKIENLEKDVYEVLCLEREEREMQQ
SEAQINRAKKQLETGKQGTVGEGLERCWFQTREERKKEKLAKALQEFDLALRGKKKRKKF
MQDRQKKVQMTPEERSQFEILKSQMYAERLAKRNRRAKRARVLPEEESAAALTGPKWKKK
LSVFDEELTNTSRKALKQYRAGPSFEDRKHLGMAQHRKGGNFKSKSRYKYKRK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatgaagtttcctgcacaaaacaggatttcctcaggagcgcctgggcggcg
gcattgcgccagctccgcggcaagagagcagctacgacgctggatgagaagattgagaaa
gtgagacagaaaaggaagttccaggaaagagaagctaaacaaacaaaattgagagatgaa
gatgtggagactgagaataatcaaaccaaaaagagagagtgtgaggattttggtagggat
gaagaagaagaagatgcggagtcccagtattcattggatgatgaaactatcttcacaaaa
gcagatacggtcaaagtgaaggaacggaagagatcgaaaaagggagaaatggaaacagag
agcttttttgaagatgcctctcaatatgatgataacttgtcattccaggacatgaatctt
tcacgacctttgctaaaggcaatcacagctcttggcttcaagcaaccaacaccaattcag
aaggcttgtatcccggtgggtcttctggggaaggatatttgtgcctgtgctgccactggg
acaggtaaaacagctgccttcatcttgcctgtccttgagcgcctgatttataaacctcgt
caggctccaataacacgggtattggttctagtgccaacacgagaattgggtattcaggtg
cactctgtcacaaaacagctggcgcagttcagcagtgtcacaacttgccttgctgttggt
ggcctagatgtaaagactcaggaagcagctctgcgctctgggccagacattcttattgcc
actcctgggcgactgattgatcatctccacaactgcccttctttccacctgagcagtgtt
gaggtgctgattttggatgaagcggacaggatgctagatgaatactttgaggaacagatg
aaggaaataatcaggttatgctctaaccaccgtcagacaatgcttttctctgccacaatg
acagaagaggtgaaagatttggcttctgtttccttgaaaaatcctgtccgaatttttgtg
aacagcaacacagatgttgcccctttcctgaggcaggaatttatccggatcagacccaac
cgagagggggaccgtgaggccattgtatcagctctgctgacacgaaccttcccagatcat
gtgatgcttttcacccagaccaagaagcaagctcaccgtatgcacatcctacttgggctg
atgggtctacgggttggggagcttcatgggaacctctcccaggcacagcggctggaagca
ctcaggcgctttaaggatgagcagattgatattctggtagctacagatgtggctgcacgt
ggacttgatattgaaggtgttaaaacagtgagtaattttaccatgcccaacaccaccaaa
cactatgttcatcgagtgggtcgaacagcaagagcaggcagggctggtcgttcagtttca
cttgtgggtgaggaagagcgcaagatgctgaaggatattgtgaagactgccaaaacacca
gtgaaagccagaattctcccccaagatgtcatattaaaatttcgagagaagattgagaat
ctagaaaaagatgtgtatgaagttctgtgcttggagcgtgaggaacgtgagatgcagcag
tcagaggcccagatcaatagggcaaagaagcagctggagacaggaaaacaagggactgtg
ggtgagggtttggagcggtgctggttccagacccgtgaagagaggaagaaagagaaattg
gctaaagccctgcaggagtttgacctagcactacgaggcaaaaagaaaaggaagaaattt
atgcaggatagacagaaaaaagtccaaatgacaccagaggagaggtcacagtttgaaatc
ttgaaatctcaaatgtatgctgagcggctggcaaaaaggaatcgccgagcaaagcgcgcc
agagtgttgccagaggaggaatcagcagcagcactaacaggccccaagtggaagaaaaaa
ctctctgtgttcgatgaagagcttaccaacacaagcaggaaggctctgaagcagtaccgt
gccggcccatcatttgaagatcgaaaacacttgggtatggctcagcataggaaaggagga
aacttcaaatccaagtccaggtataagtacaagagaaagtaa
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