KEGG   Opisthocomus hoazin (hoatzin): 104333670
Entry
104333670         CDS       T08436                                 
Name
(RefSeq) putative RNA exonuclease NEF-sp
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oha00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104333670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oha03009]
    104333670
Ribosome biogenesis [BR:oha03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    104333670
SSDB
Motif
Pfam: RRM_1 RNase_T DUF2913 CCDC3_C
Other DBs
NCBI-GeneID: 104333670
NCBI-ProteinID: XP_009937505
LinkDB
Position
Unknown
AA seq 673 aa
MSQLHFYKFYLQFKHLRKVFQHRFTLTPSTNFLASLYGGANLKPENTAQGLTSAGSERVP
KSSDLECDPIIRKYGEKKRGLTSYTLTLEEQKKNDYPIKGSPGCKGYIYTECDQQRTDSS
PLFGLDCEMCLTAKGSEVTRVSLVDAQGQCLLNELVKPEGVIVNYCTRFSGITKKMLCPV
KTRLPDIQTRLKKMLPHDAVLVGHSLNSDLQALKMIHPSVIDTSLLFARNEGRRFKLKFL
AKAVLGREIQCEQMLGHDPAEDARAALELAQYFIEQGPAKVAELNLEMLLTTEKLAEVSQ
NKAALQPQGCRVQKKLNKPPHLAKPCFLDCLQVTGQRPLLLGRQELESSGLCQSNLSISN
KEILQRALEDVPLSTFSIVQFSLDPEYVASHLLAGLCEKVRSKLTDMLTIYVGPFEEGFC
LKSVKKEFGRCGPIQSLTVVTETYQPHVCIQYEVLEAAQLAVESLNGAEVAGSCIKVQRP
VTAAMLDSDVLIKELELDVENEGVIYVAGLKKSLTETDLKEEFSQLKDLETLFLPKDLQS
GKHRNCCFLKFQKSQSAVDALEVIHGWTVKGSKLRSRNALASGHLWKWIWQMNRSDGKQG
GNILHERMKQLSDSEQDLTKKVKKLDHHIKKLYRSLQNNTLCVVLFPGVNSMDGSQSGLG
LMAIKDDGGRSAC
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagccaacttcatttctacaaattctatttgcagttcaaacacctcagaaaagtgttc
cagcatagattcacattaacaccttccaccaacttcctagccagcctgtatggcggagca
aacctgaaacctgaaaacactgcacaaggtttgacttctgctggcagtgaacgtgttcct
aaaagctcggacttagaatgtgatcccatcattcggaaatacggagaaaaaaaacgaggc
cttactagctatactctaactttagaagagcagaaaaaaaatgactatcctataaaaggc
tccccagggtgtaagggctatatatatacagagtgtgatcagcagaggacggacagcagc
cccctctttggtctggattgtgaaatgtgcttgactgcaaaagggagcgaagtcactcgt
gtctctttggtggacgcacagggtcagtgcctcttgaatgaactagtcaaacctgaaggc
gtaatagtgaactactgcaccagattctcaggaatcacaaagaaaatgctttgtccagtg
aaaacaagactgccagacatccaaaccagactaaaaaaaatgcttccccatgatgcagtg
ttggtgggtcattctttaaattctgatcttcaggctttgaaaatgatccaccccagtgtt
attgatacttcattgctttttgccagaaatgaaggtcgaagatttaagctaaaatttcta
gccaaagctgttttagggagggagattcagtgtgaacagatgcttgggcatgatcctgca
gaagatgctagagctgcattggaattggctcagtactttatcgagcaaggaccagcaaag
gtagcagaactaaacttggagatgcttctgacaacagaaaaactggctgaggtctcacaa
aataaagctgcattacagccacaaggatgtagggtccagaaaaagctgaataagcctcca
catttagccaaaccatgttttttagactgcttgcaggtgactggccaaagacccctcctt
ttgggcagacaggaactagagtcttctggcctgtgtcagagtaacctgagcatttcaaac
aaagagattcttcagagagccttagaagatgttcccctgtcaacattcagtattgttcag
ttcagtttggatccagagtacgttgcatctcaccttcttgctggactttgtgaaaaggtg
agaagcaagctgactgacatgctgacaatttacgtaggtccttttgaagaaggcttttgc
ctgaagtctgtgaagaaagaatttggcagatgtggaccaatccagtctcttacagtggta
actgaaacctaccagccccatgtctgtatccaatacgaagtgctggaagctgcccagctt
gctgtcgaaagcctaaatggagctgaggtagcgggatcctgcattaaggtccagagacct
gtcactgcagcaatgctggactctgatgttttgataaaggaactagaactggatgtagaa
aacgaaggtgtgatttatgtggcgggtctaaagaagtcattaacagagacggacttgaaa
gaagaattcagccagttgaaagacctggaaacactgttcctgccaaaggatctccagagt
ggaaagcacaggaactgctgtttcctcaaattccagaaatcacagagtgctgtggatgca
cttgaggttatacatggatggactgtgaagggcagcaaactaagaagtaggaacgctctt
gcttcaggtcacctctggaagtggatttggcaaatgaatcgcagcgatgggaagcaagga
ggaaacatcttacatgagagaatgaagcaactgtctgactcggagcaggatctaacgaaa
aaggtgaagaagttagaccaccatatcaaaaagctttatagaagtctgcagaataacacc
ctgtgcgttgttctctttcctggagtgaacagcatggacggatcacagtctggccttggt
ctgatggcaattaaagatgacggagggaggagtgcttgttaa

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