Opisthocomus hoazin (hoatzin): 104333670
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Entry
104333670 CDS
T08436
Name
(RefSeq) putative RNA exonuclease NEF-sp
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104333670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oha03009
]
104333670
Ribosome biogenesis [BR:
oha03009
]
Eukaryotic type
Pre-60S particles
RNases
104333670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DUF2913
CCDC3_C
Motif
Other DBs
NCBI-GeneID:
104333670
NCBI-ProteinID:
XP_009937505
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MSQLHFYKFYLQFKHLRKVFQHRFTLTPSTNFLASLYGGANLKPENTAQGLTSAGSERVP
KSSDLECDPIIRKYGEKKRGLTSYTLTLEEQKKNDYPIKGSPGCKGYIYTECDQQRTDSS
PLFGLDCEMCLTAKGSEVTRVSLVDAQGQCLLNELVKPEGVIVNYCTRFSGITKKMLCPV
KTRLPDIQTRLKKMLPHDAVLVGHSLNSDLQALKMIHPSVIDTSLLFARNEGRRFKLKFL
AKAVLGREIQCEQMLGHDPAEDARAALELAQYFIEQGPAKVAELNLEMLLTTEKLAEVSQ
NKAALQPQGCRVQKKLNKPPHLAKPCFLDCLQVTGQRPLLLGRQELESSGLCQSNLSISN
KEILQRALEDVPLSTFSIVQFSLDPEYVASHLLAGLCEKVRSKLTDMLTIYVGPFEEGFC
LKSVKKEFGRCGPIQSLTVVTETYQPHVCIQYEVLEAAQLAVESLNGAEVAGSCIKVQRP
VTAAMLDSDVLIKELELDVENEGVIYVAGLKKSLTETDLKEEFSQLKDLETLFLPKDLQS
GKHRNCCFLKFQKSQSAVDALEVIHGWTVKGSKLRSRNALASGHLWKWIWQMNRSDGKQG
GNILHERMKQLSDSEQDLTKKVKKLDHHIKKLYRSLQNNTLCVVLFPGVNSMDGSQSGLG
LMAIKDDGGRSAC
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacttcatttctacaaattctatttgcagttcaaacacctcagaaaagtgttc
cagcatagattcacattaacaccttccaccaacttcctagccagcctgtatggcggagca
aacctgaaacctgaaaacactgcacaaggtttgacttctgctggcagtgaacgtgttcct
aaaagctcggacttagaatgtgatcccatcattcggaaatacggagaaaaaaaacgaggc
cttactagctatactctaactttagaagagcagaaaaaaaatgactatcctataaaaggc
tccccagggtgtaagggctatatatatacagagtgtgatcagcagaggacggacagcagc
cccctctttggtctggattgtgaaatgtgcttgactgcaaaagggagcgaagtcactcgt
gtctctttggtggacgcacagggtcagtgcctcttgaatgaactagtcaaacctgaaggc
gtaatagtgaactactgcaccagattctcaggaatcacaaagaaaatgctttgtccagtg
aaaacaagactgccagacatccaaaccagactaaaaaaaatgcttccccatgatgcagtg
ttggtgggtcattctttaaattctgatcttcaggctttgaaaatgatccaccccagtgtt
attgatacttcattgctttttgccagaaatgaaggtcgaagatttaagctaaaatttcta
gccaaagctgttttagggagggagattcagtgtgaacagatgcttgggcatgatcctgca
gaagatgctagagctgcattggaattggctcagtactttatcgagcaaggaccagcaaag
gtagcagaactaaacttggagatgcttctgacaacagaaaaactggctgaggtctcacaa
aataaagctgcattacagccacaaggatgtagggtccagaaaaagctgaataagcctcca
catttagccaaaccatgttttttagactgcttgcaggtgactggccaaagacccctcctt
ttgggcagacaggaactagagtcttctggcctgtgtcagagtaacctgagcatttcaaac
aaagagattcttcagagagccttagaagatgttcccctgtcaacattcagtattgttcag
ttcagtttggatccagagtacgttgcatctcaccttcttgctggactttgtgaaaaggtg
agaagcaagctgactgacatgctgacaatttacgtaggtccttttgaagaaggcttttgc
ctgaagtctgtgaagaaagaatttggcagatgtggaccaatccagtctcttacagtggta
actgaaacctaccagccccatgtctgtatccaatacgaagtgctggaagctgcccagctt
gctgtcgaaagcctaaatggagctgaggtagcgggatcctgcattaaggtccagagacct
gtcactgcagcaatgctggactctgatgttttgataaaggaactagaactggatgtagaa
aacgaaggtgtgatttatgtggcgggtctaaagaagtcattaacagagacggacttgaaa
gaagaattcagccagttgaaagacctggaaacactgttcctgccaaaggatctccagagt
ggaaagcacaggaactgctgtttcctcaaattccagaaatcacagagtgctgtggatgca
cttgaggttatacatggatggactgtgaagggcagcaaactaagaagtaggaacgctctt
gcttcaggtcacctctggaagtggatttggcaaatgaatcgcagcgatgggaagcaagga
ggaaacatcttacatgagagaatgaagcaactgtctgactcggagcaggatctaacgaaa
aaggtgaagaagttagaccaccatatcaaaaagctttatagaagtctgcagaataacacc
ctgtgcgttgttctctttcctggagtgaacagcatggacggatcacagtctggccttggt
ctgatggcaattaaagatgacggagggaggagtgcttgttaa
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