KEGG   Opisthocomus hoazin (hoatzin): 104333799
Entry
104333799         CDS       T08436                                 
Name
(RefSeq) LOW QUALITY PROTEIN: helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
oha  Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:oha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oha03400]
    104333799
Enzymes [BR:oha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     104333799
DNA repair and recombination proteins [BR:oha03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    104333799
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DGKD_4H DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 104333799
NCBI-ProteinID: XP_009937645
LinkDB
Position
Unknown
AA seq 1003 aa
MFLQRSNDSEEKIFGNYDGFYGNDSLLAQVGIEHKHLQDKNMDTKAPGDIICGSLQSGFH
QKKQDNFSSSENMVVLKAVKEYAFQMNETDSVDSNQESTESILDDLPSSQLLYFEKMDEL
SSGSRISPVSERRNKCVSSSSDKIRSPSSFCPDAEHGNKPIDSDSKYDLFKTESLKDHIK
NAMTGNAKAQTLQVSKTKQLKEAVLSEEICFARKTIKSSSVDIGPFYGLPSKVQDLLRQF
RGIEMLYEWQHDCLMLESLQQRKNLIYSLPTSGGKTLVAEIIILQELLCRQKDVLMILPY
VAIVQEKVRGLSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATIEKGHALVNSLIE
TERIGDLGLVVVDELHMVGEGSRGATLEITLAKILYTSKNTQIIGMSATLNNVGDLQKFL
RAEYYTSDFRPVELKEYVKIRDTIYAVDGKTENDFTFSRLLNFKYSSNLEKADPDHVIAL
VTEVIPQYSCLVFCPTKKNCENVASMVCRYLKKEFRAHREKEKQDLIKNLKNIGSGSVCP
VLKETIPFGIAYHHSGLTNDERKSIEEAYSAGVLCLLACTATLAAGVNLPARRVILRAPY
VGNDFLKKNQYKQMIGRAGRAGFDSAGESILIVQEKDKHLVQDLVKSPLENCYSNLLVQL
TKGMQSLLLSLVGLKIAVTHEEVNDFMCSTLLGVQQQQLSKEKSXXXIIKDGLENLIEKG
LLKVRLSEKDHNSICMLMITPLGKATYKGSIDLAYCNLLYRELKKGLEGLILESNLHLLY
LVTPYDVTSNCSPDWMIYLRQFNQLSTAEQKVADIVGVPESFITKKASGQAIRKNVDSAV
VNRLYLSLVLYNLLKETNIWSVSEKFNMSRGYVQNLLNSAASFTSCVLHFCEELEEFWVY
KALLTELTKRLTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTSAHLANANPETLVKMIE
HLSRHQAKQIVSSAKMLLSEKTEALQEEVEELLKVPTDIPETY
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgtttttacagcgtagtaatgatagtgaagaaaagatatttggcaactatgatggattt
tatggaaatgattctttgctagctcaagttggtatagagcacaaacatctgcaggataaa
aatatggatactaaagcacctggagacatcatatgtgggagtcttcagtcaggatttcac
cagaaaaaacaagataatttttcttcttcagaaaacatggtggttcttaaagctgtcaaa
gagtatgctttccagatgaatgaaactgactcggtggatagcaaccaagaatcgactgaa
tctattttagatgacttgccatcatcacagcttttgtattttgagaaaatggatgaactt
tcttctggttctagaatatctccagtctcagaaaggaggaataaatgtgtgagttcttcc
tcagacaaaatcaggagtccatcatctttttgtcctgatgctgaacatggaaacaaacct
attgactctgactctaaatatgacttatttaaaactgagagccttaaggatcatataaaa
aatgctatgactggaaatgccaaagcccagactctgcaggtctctaagaccaagcagctt
aaagaagctgttttatctgaagagatttgttttgctaggaaaactattaaatcttcttct
gttgatataggccctttttatggattacctagcaaagttcaagatctattgagacaattt
cgagggattgaaatgctttatgaatggcagcatgattgcttaatgttagaatctctgcag
caaagaaagaatttaatatactcattaccaaccagtggtggaaaaacacttgtagctgaa
ataataattctccaagaactactctgcaggcagaaagatgttttgatgatactgccatac
gttgccattgtccaagaaaaggttaggggtttatcgagttttggaatagaattgggtttc
ctggttgaagaatacgcaggaagtaaaggaagatttccaccaatcaaaaggagaataaaa
aagtccctttatattgctactatagaaaaagggcatgctctagtgaacagcttaattgaa
acagaaagaattggtgacctcggtctggttgtagtagatgagttgcatatggttggtgag
ggaagtcgtggagcaacactggaaattactcttgcaaaaattctttacactagtaaaaat
acacaaatcattggaatgagtgcaactttaaataatgttggagacctgcagaagttcctg
cgagcagagtactataccagtgattttagaccggtagaattaaaggaatacgtaaagata
cgagacaccatttatgcagttgacggcaaaacagaaaatgactttactttttcacgtctc
ctcaatttcaagtattctagtaatctggagaaagcagatcctgaccacgtcattgcactg
gttactgaagttattcctcaatattcctgccttgtcttttgtcctactaaaaagaactgt
gaaaatgtggcttctatggtgtgcaggtacctcaagaaagaatttagagctcacagggag
aaagagaaacaagatctcatcaagaatctaaagaatattggaagtggaagtgtctgtcct
gttctgaaggaaacaatcccttttggtattgcctatcatcatagtggccttacaaatgat
gaaagaaaaagtatagaggaagcatattctgcaggtgtcctgtgcctacttgcttgcacg
gctactttagctgctggagtcaacctgccagctagaagggttattctaagagctccttat
gttggtaatgacttcctgaagaagaaccagtataaacaaatgattggcagagctggtcga
gctggttttgacagtgctggggaaagtattctcatagtgcaagaaaaagacaagcatttg
gttcaggatttagttaagagtcctttggagaactgttacagcaatcttttggtgcagttg
accaagggaatgcagagcctgttgttatctttggttggactgaagatagctgttacacat
gaagaagtcaatgattttatgtgcagtacattgctgggtgttcagcagcagcagctgtct
aaagagaagagcnnnnnnnngataattaaagatgggctagaaaatcttatagaaaaagga
cttctaaaagtaagactatctgagaaggaccacaattccatatgtatgctaatgatcaca
ccgttgggtaaagctacatataaagggtctatagacttggcgtactgcaatcttctttac
agagaattgaaaaaaggtttggaagggctgattcttgagagcaatcttcatcttctgtat
ttggtaactccatatgatgtgacttctaactgtagcccagattggatgatatacctgcga
cagttcaaccagctaagtacagcagagcaaaaagtagcggatattgtgggagtacctgaa
agctttattacaaaaaaggcttctggtcaagccatcagaaagaatgtggacagtgctgtg
gtgaacaggctctacctgtcgcttgtcctttataacctactgaaagagaccaatatatgg
agtgtttcagagaaatttaatatgtcccgaggatatgtgcaaaatctccttaattctgct
gcctcattcacctcatgtgttctacatttctgtgaggaattggaagaattctgggtttat
aaagccttactgacagaacttactaagcggttgacatattgtgttaagacagaactcatc
cctctgatggaggtagcaggggttctagaggcacgagcaaaacagctttataatgcaggg
tacaaaacttcagcacacttggctaatgcaaatccagaaactctggtcaagatgattgag
cacttgtcacgacatcaagccaaacaaattgtttcatctgcaaagatgttgctgagtgaa
aaaactgaggctttacaagaagaagttgaagaactcttaaaggtgcctacagatatcccg
gagacctactga

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