Opisthocomus hoazin (hoatzin): 104333820
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Entry
104333820 CDS
T08436
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04512
ECM-receptor interaction
oha04514
Cell adhesion molecule (CAM) interaction
oha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104333820 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
104333820 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104333820 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oha04131
]
104333820 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oha04090
]
104333820 (SDC1)
00535 Proteoglycans [BR:
oha00535
]
104333820 (SDC1)
Membrane trafficking [BR:
oha04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
104333820 (SDC1)
CD molecules [BR:
oha04090
]
Proteins
104333820 (SDC1)
Proteoglycans [BR:
oha00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
104333820 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
104333820
NCBI-ProteinID:
XP_009937676
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MTGSQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDQSRTWRLPEQLTNSSLLATPMDFN
EQPFPGTESRTEKEVIFPSATSNVVTEEPAVAVKDEVSILSSPDEKPTNDVVTTTVRSPT
THLPSVVHVTPSEASGTVHELEPKIPSSDVPDTKELPEPHSTIRHEGDVAATPTTAAPKD
VVPTHEDVSEDGSGDPGDFILTKDEDLVPTQNTEVLADSGRNAKAAGASGIMDRKEVLGG
VIGGGLVGLAFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgactggctcgcaaactacaaatctgaaccttcctcctgaagatcttgattcatctggt
gatgacgacgatgcattctcaggttcaggtgcaggtcccctgactgaccagtctcgcacc
tggagactcccagaacaactgactaattcctcattactggcaacaccaatggatttcaac
gaacagccgtttccagggactgagagccgaactgaaaaggaagtaatatttccttctgca
actagtaatgtagtgacagaggagccagctgtagctgtgaaggatgaagtatccatcctc
agctcacctgatgagaaaccaacgaacgacgtggttacaacaacagtgagaagccccacc
actcacttgccttcagtggttcatgtaactccgtcagaagcctcgggcacagtccatgag
ctcgaacccaaaatccctagctctgatgtgcctgacactaaagagttgcccgagccccac
tctaccatccgtcacgagggggacgtcgctgccacccccacgacagcagctccgaaggac
gttgttcctacgcatgaggacgtttctgaagatggctctggagacccgggagacttcatc
ttgactaaagatgaggatttggtccccacccagaacacagaagttctggctgactctggg
aggaatgccaaagcagcaggagcctcgggaattatggacagaaaagaagttcttggaggt
gttattggtggaggactggtaggcttggcattcgcagtgtttctagttgcatttatgctg
tacagaatgaagaagaaagatgaaggcagctattcactggatgaaccaaaacagtcaaac
ggaggataccaaaaaccacacaaacaagaagaattctacgcataa
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integrated database retrieval system
