Opisthocomus hoazin (hoatzin): 104333969
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Entry
104333969 CDS
T08436
Symbol
SAMD4A
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 1
KO
K27396
protein Smaug
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104333969 (SAMD4A)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104333969 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
104333969
NCBI-ProteinID:
XP_009937839
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRLSRTQARFLQLCLEHSLADCAELHVLEG
EANNPGIINQWQQESKDKVISLLLTHLPLLKPGNIEAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSGGFGGQSRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGISVSASSWQDKNLACENGHLPLYSSSSVPTTINTIGTSTSTTL
SGQTHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCIPSDHAPLSPQSSVASS
GSGGSEHLEDQPSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDILEGGNLRVPLQELHQMILTPIKAYSS
QNSSTEEHSRDADSHHPSALIGSDTQGSDCKDSAAGGMQQHHLPGCEGESGGAPLPEGDL
PGQFTRGSGQVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTEIQKKRLLSWKQQVQKLF
RSFPRKSLLELSGYRQQRRTRGFGRGGMDAVSGGAGKSISRGTGVSQFLSWSPDRVSCPF
LPAEFQVPVTEPDINNRLESLCLSMTEHALSVKHPRGADSRRCIYYSFPPAEPGVAAPFR
ISVALGAKGDD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagaccaggtcggcgtcttggccggttggttcaagggctggaacgagtgc
gagcagacggtcgcgctgctctcgctgctgaaacgcctcagccggacccaggcgcgcttc
ctccagctctgcctcgagcactccctggccgactgcgccgagctccacgtcctcgaaggc
gaagccaacaaccccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctattgttaacccacctgcctttactgaagcccggaaacatcgaggcaaaagtcgaa
tacatgaaactcttgcccaaaatcctggcccactcgatcgaacacaaccaacacatcgag
gagagcaggcagctgctgtcctacgccttgatacacccggccacctccttggaggacagg
agtgccctggccatgtggctcaaccacctggaggaccgcacgtcgggtggcttcggtggc
cagagcagaggtcgctcggattcggtggactacgggcagacgcactactatcaccaaaga
caaaactccgacgacaaactcaacggatggcaaaactctcgagactcgggcataagcgtc
agcgcttccagctggcaggacaaaaacctggcgtgcgagaacggccatctgcccctctac
tcctcctcctccgtccccacgaccatcaacaccatcggcactagcacaagcaccactctc
tcaggccagacacaccacagccctttgaaacgctctgtgtcccttaccccacccatgaat
gtgccaaaccaacccctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcatcccttccgatcatgcccccctgtctccacaaagcagtgtagcctcttcg
ggaagtggtgggagtgaacatttagaagatcagccttccgctcgtaacacattccaggag
gaagggagtgggatgaaagatgtcccagcctggctgaagagcctccggctgcacaagtac
gccgccctcttctcgcagatgacgtacgaggagatgatggccctcaccgaatgccagctc
gaggcacaaaacgttaccaaaggcgcaagacacaagatagtcatcagtatccaaaagcta
aaagaaagacaaaacctgctcaaatctttagaaagggacatcctggaaggcggcaacttg
cgtgtcccgctgcaggaactacaccaaatgatcctcacccccatcaaagcctactcttcc
caaaactccagcacggaggagcacagccgggacgcggactcgcatcacccctccgccctg
atcggctcggacacccaaggctccgactgcaaggactctgcggcgggggggatgcagcag
caccatttgccggggtgcgagggcgagtcggggggggcccctttgcccgaaggtgacctg
cccgggcagttcaccagaggttcggggcaggtatgcacacaacttttagtttcccgaccc
gacgaagagaatatcagttcctatttacagctcatagacaaatgtctgatccacgaggcg
tttacggagatccagaagaagcggctgctgtcatggaaacagcaggtgcagaaactcttt
cggtctttccctcggaaatccctcctggagctgtcgggctatcggcagcagaggaggacg
cggggtttcgggaggggtgggatggatgctgtgtccgggggtgccggcaagagcatctcc
agagggaccggtgtctcccagttcctctcttggtcccctgaccgagtctcctgtcccttt
ctccccgcagagttccaggtgccggtgactgaacctgacatcaacaacaggctggagtcc
ctgtgcctgagcatgacggagcacgcgctcagcgtgaaacacccccgtggtgccgactcg
cgccggtgtatttattactcgtttcctcccgcggaaccgggcgtcgcggctccatttcgt
atcagcgtggcgttgggagcgaagggagatgattaa
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