Opisthocomus hoazin (hoatzin): 104334024
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Entry
104334024 CDS
T08436
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04510
Focal adhesion
oha04512
ECM-receptor interaction
oha04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104334024 (TNR)
04518 Integrin signaling
104334024 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104334024 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oha00536
]
104334024 (TNR)
Glycosaminoglycan binding proteins [BR:
oha00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104334024 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
EGF_TEN
Fn3_Dep-1_3rd
EGF_Teneurin
Fn3_Dep-1_2nd
Fn3_VIN3
EGF_Tenascin
FN3_Tor_3rd
EGF_2
Lzipper-MIP1
TSC22
DUF7949
Motif
Other DBs
NCBI-GeneID:
104334024
NCBI-ProteinID:
XP_009937902
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MGTDSENPVLRNVLISFNLLLLGAVLKPFECRLEVTTEPAERSAVDEEGGLANCSPPIKE
QPMVFHHIYNINIPLDSCCSSMFKSSAEEVSSEDDRLAEYAEQTSDSESQVTFTHRINFP
KQAFKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGQLDYTPQCSGHGNF
SLESCSCVVDGECVCEEGFTGEDCSQLRCPRDCSGKGHCVNGTCVCQEGYAGEDCGWLHC
PNACSSRGVCRDGLCVCEEGYEGQDCSADVTGRSLGGERKAGDVCLNIGGKSLRVPGDWS
SITITELEAGVAYNVSVYAVISDVLSIPVTYKVMTNLATPQGLKFKTITETTVEVQWEPF
SFPFDGWEISFIPKNNEGGMIAQLPSTVTTFNQTGLKPGEEYTVTVVALKEQARSPPTSD
SVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDTILLFFLPPRARVDTILRKYGLADGE
GGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESRPALAQFTTEIDAPKNLRVGS
RTPASLELARPPASLQLSWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLAD
LVPGTEYGIGISAVMDTQQSVPATMNARTELDSPRDLLVTASTETSISLTWTKATGPIDH
YRVTFTPASGMASEVTVPQDESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVR
PITQLHFSQLTSSSVNVTWSDPSPPADRLILTYSPRDEEEAQQLALDGTRRHASLTGLQP
STEYLVSLVAMHGAISSEPVMGSIKTGIDAPKDLRVGNVTQESMIIYWSSPIAAFDHYRI
SYRAAEGRTDSTAIASDATKYALHRLQPATKYEIGVKSVRGREESEVASITVHTAMDAPL
GVTATNITPTEVLLQWNPPLSEVESYILILTRRAVAGETILVDGVNQEYQLTNLLPSTTY
TVSMYATNGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPVGEIENYIMTYRS
SDGSRKELIVDAEDTWIRLEGLSETTEYTVHLQAAQNAVRSSFISTTFSTGGRVFANPQD
CAQHLMNGDTLSGIYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADY
RVGFGNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRI
GDYNGTSGDSLSYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRH
SQGINWYHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggggactgatagtgaaaacccagtcctgaggaacgtgctcatcagcttcaacttgctt
ctgctgggcgctgtcctcaaaccttttgagtgccggctggaggtgacaacagagccagct
gagaggtcagcggtggatgaggagggtggccttgccaattgcagcccacccattaaagag
cagcccatggtcttccaccacatctacaacatcaacatccctctggacagctgctgctcg
tccatgttcaagtcttcggccgaggaggtgagttcagaagacgaccgtctggcagaatat
gcagagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacttcccc
aagcaggccttcaagtgctccacctccctcccatccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatgctgcgggaccaatgcaactccaattgctgccaa
gaaaatgcagccacagggcagctggattacaccccgcagtgcagcggccatgggaacttc
agcctggagtcctgcagctgcgtcgtggacggcgagtgcgtctgcgaggagggtttcacc
ggggaggattgctcccagctgcggtgcccccgcgactgctcggggaagggccactgcgtc
aacggcacgtgcgtctgccaggagggctacgccggggaggactgcgggtggctgcactgc
cccaacgcctgcagcagccgcggagtctgccgggacggtctctgtgtctgcgaggaaggc
tacgaagggcaggactgctcagcagacgtcacaggcagaagtttgggaggcgagcgaaaa
gccggcgatgtttgtctcaacatcggtggtaaatccttgcgggtgcccggggactggagc
agcatcaccatcacggagctggaggcaggcgttgcctacaatgtcagcgtctacgcagtc
atcagcgacgtcttgagcatccctgttacctacaaggtgatgaccaaccttgccacaccg
caggggctgaagttcaagaccatcacggagacaacggtggaggtgcagtgggagcccttc
tccttccccttcgatggctgggagatcagcttcatccccaagaataacgagggcggcatg
atcgcccagctccccagcaccgtcaccaccttcaaccagacggggctgaagccgggggaa
gagtacaccgtcaccgtggtggccctgaaggaacaagccaggagccctcccacctctgac
agcgtctcaaccctcatcgacggcccaacgcagatcctggtgcgggacgtctccgacacg
gtggccttcgtggagtggacaccgccgcgcgccaaggtggacaccatcctgctttttttt
ttacccccgcgcgccagggtggacaccatcctgcggaagtatgggctggcggacggggag
ggggggaggaccaccttccgcctgcagccccccctcagccagtactccctgcaggccctg
cgccccggcgcccgctaccacctcgccgtcagtgccctccggggtgccaacgagagccgg
ccggccctcgcccagttcaccacagaaatcgatgcccccaagaaccttcgggtgggctcg
cggacgcccgccagccttgagctcgcgcggccgcccgccagccttcagctctcctgggac
aacagcgaggccgaggcgcacagctacagggtggtctacagcaccctggccggggagcac
taccatgaagtcctggtgccgcgggacaccggtcccaccacccgggccaccctcgcagat
ctggtgccagggacagagtacggcatcgggatttcagccgtgatggacacccagcagagc
gtgccggcaaccatgaatgccaggacagagcttgacagcccccgggatctcctggtgaca
gcctccactgagacgtccatctcgctaacctggaccaaagctacaggtcccatcgaccac
taccgtgtcaccttcacccctgcctcggggatggcctctgaagttacagtgccccaggac
gagtcgcagctcaccctctcagaattggagcccgggacggagtataccatctccatcatc
gccgagaggggacgccagcagagcctggaggccaccgtggatgccttcacaggggtccgg
cccatcacacagctccacttttcccagctgacatcctccagcgtgaacgtcacttggagt
gatccatccccaccagcagaccgcctcatcctcacctacagcccccgggatgaggaggag
gcacagcagctcgcgctcgatggcacccgcaggcatgccagcctgacgggcttgcagcca
tccaccgagtacctggtgtcactggtggccatgcatggcgccatcagctccgagcctgtc
atgggctccatcaagacaggcatcgatgcaccaaaggatctcagggtgggcaatgtcacc
caggagtccatgatcatctactggagttctcccatcgctgccttcgaccactatagaata
tcctaccgcgctgccgaagggaggacagacagcaccgcaatcgccagcgatgccaccaag
tacgccctccaccgcctgcagcctgccaccaagtacgagatcggggtgaagagcgtgcgg
ggccgggaggagagtgaggtagcctccatcactgtgcacacagccatggatgctcccttg
ggggtcacggccaccaacatcacccccaccgaggtgctgctgcagtggaacccaccacta
tcagaggtggagagctacatcctcatcctcacccgccgcgcagttgcaggagaaacaatt
cttgtggatggagttaaccaggagtaccagctgaccaacctcttgcccagcaccacctac
acagtctctatgtatgccaccaacgggcctctcaccagccagaccatcagcaccaacttc
actactcttttggatcctccaacaaatctgaccgccagcgaagtcactcgacggagtgcc
ctgctctcctgggtgcctcccgtgggggagatcgagaactacatcatgacctacagatcc
agcgatggcagccggaaggagctgattgtggacgctgaggacacgtggatccgcctggag
gggctttctgagaccacagagtacaccgtgcacctgcaagctgcccaaaatgctgtgcgg
agcagcttcatctccaccactttcagcacaggcggccgtgtctttgctaaccctcaggac
tgcgcccagcacctgatgaatggagacacgctgagcggcatctacaccatctccatcaac
ggggacctcagccagcgggtgcaggtctactgcgacatgaccaccgatggaggcggctgg
attgtgttccagaggcgtcagaacgggctgaccgatttcttccggaaatgggcagattac
cgggttggcttcggaaacttggaggatgagttttggctgggcttggacaacatccataag
atcacatcccaggggcgctacgagttgcgaatagacatgagggacggccaggaagcagcg
tatgcctactacgacaagttctccatcggcgactctcggagcctgtacaagttgcgaatc
ggggactacaacggcacttcaggggactccctcagctatcaccagggccgccccttctcc
accaaggacagggacaacgacgtcgccgtgaccaactgtgccatgtcctacaaaggggcc
tggtggtataagaactgccaccgcactaatctcaacggcaagtacggagagtcccgacac
agtcaggggattaactggtaccactggaaaggccacgagttctccatcccctttgtggaa
atgaagatgcgaccttacaaccaccgtaacatctctgggaggaagcgacggtccctacag
ctctga
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integrated database retrieval system
