Opisthocomus hoazin (hoatzin): 104334112
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Entry
104334112 CDS
T08436
Symbol
VPRBP
Name
(RefSeq) protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oha01001
]
104334112 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oha04121
]
104334112 (VPRBP)
Enzymes [BR:
oha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104334112 (VPRBP)
Protein kinases [BR:
oha01001
]
Serine/threonine kinases: Other
Other
104334112 (VPRBP)
Ubiquitin system [BR:
oha04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104334112 (VPRBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
LisH
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
104334112
NCBI-ProteinID:
XP_009937996
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVSGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKSKLGKQHERDGFRKAKQKLGFSASEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVAAAASPVTLPRTP
RIANGISARLSSHPSVGSTATSVHAQARPSASQGPPALPGPSYASNSPLIGRISFVRERP
SPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactactttgcttgagcaa
tgggagaaagaacatggcagtgggcaagacatggtccctattctcaccagaatgtccgag
ctgattgagaaagagactgaagagtaccgcaaaggggatccagacccatttgatgaccga
cacccaggtcgagcagacccagagtgcatgcttggtcacttactgaggatacttttcaag
aatgatgatttcatgaatgcgctagtgaatgcttacgtaatgacaagcagagaacctcca
ttaaacactgctgcctgccgacttcttctggatatcatgccaggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcgcgagaggctgat
cagccgctacggacgtatgcaacagggctattaggaggagctatggaaaaccaggatatt
gctgcaaattacagggacgagaactcacaattggtggccttggtgctccgacggctacga
gagttacaggttactgaaatgactacaaaacaagaaaacaagcgtcccagtcctcggaaa
gtgccatcggatcccctactgcctctagatgaagaggctgtggatatggactatggggag
atggcagtagatggagagcaagaggaagtctctggggatatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtaaactctgctacaaagctagatgatggggga
ctgagaaaaagcaaattagggaagcagcatgaaagagatggcttccggaaggccaagcaa
aagctgggcttctctgcttcagaaccagaacggatgtttgttgaactgtccaacagcagc
tggtcagaaatgtccccatgggtgattggcactaattatacactttaccctttgactccc
gccatagagcagaggctaattcttcagtacctgactcccttaggggagtaccaagagcta
ctaccgatctttatgcaactgggatcaagggagctgatgatgtactacatcgatttgaag
cgaaccaatgatgtgctgctcacttttgaggcccttaagcatttggcatcattgctgctg
cacaacaagtttgcaacggagtttgttgctcatggaggagtgcagaagttgctggagatt
cctcgtccttccatggcagcaacaggggtctccatgtgtttatattacttgtcttacaat
caagatgccatggagagggtgtgcatgcacccccataatgtgctttcagatgtagtaaac
tacaccttatggctaatggagtgctcccatgcctcaggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctctttgacaggcatgatggcctt
cgacgtctggttaacctgataagcactcttgagatcttaaacctggaagaccaaggagcc
ctcttgagtgatgatgagatctttgctagtcgccagactgggaaacacacctgcatggcc
ttgcgtagatactttgaggctcaccttgctatcaaacttgaacaggtgaagcagtcactc
cagcgcactgaaggtggcattctggtccatccacagcccccctacaaggcctgttcgtat
actcatgagcagattgtggagatgatggagttcctgattgagtatggtccagcacagctc
tactgggagccagcagaggtttttctgaagttgtcatgtgtccaactcatgcttcagctc
atttcaatagcatgcaactggaagacatactatgcaaggaatgacacagtacgatatgcc
ttggatgtactagccatcctgactgtggttcctaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgccgagattcagaaatcagcccttcag
atcatcatcaattgtgtatgtggtccagataatcggatctccagcattggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggcccccaagagcagtgagcacacattagcg
aagatgtggaatgtggtacagtccaacaatggcatcaaagtactgctgtcactgctgtct
ataaagatgccgatcacagacgcagatcagatccgagcattagcctgcaaagccttggtg
gggctctcacgcagcagtactgtccggcagattatcagcaagcttcccctcttcagcagc
tgtcaaattcagcagctgatgaaagagccagtgcttcaggacaagcgcagcgagcatgtg
aagttctgcaaatacgctgctgagctgatagagcgtgtttcggggaagccattgctgatt
ggcacagacgtctctctggctcggttgcagaaagcggatgtggtggcccagtcgaggatc
acctttcctgagaaggagctgctgcttctgattcggaaccatcttatctctaagggtcta
ggagaaactgcatctgtcctcactaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcacccccgttgcagctgctgcctctcccgtgaccctgcctcgcactcct
cgcatagctaatggcatctcagcccgtttgagtagccacccttctgtaggttccactgcc
acctctgtccatgctcaggcaagaccgtctgcatcccaaggtccacctgcccttccaggc
ccttcttacgccagcaactctcctctgattggcaggatcagctttgtcagggagaggccg
tctccctgcaacggcagaaaaatcagagtgttgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacacctcccttccccacccacgctg
gacagtataatcacagagtaccttagggagcagcatgcccgctgcaagaaccccgttgcc
acctgcccccctttctctctctttactccccaccagtgccctgagccaaaacagaggcgc
caggcgccaactaactttacctcacggctgacccgcagggccgcctttccgaagtacgga
ggggtggatggtggctgctttgatagacacctcatatttagcaggttccgtccgatttct
gtgttcagggaagcaaatgaggatgagagtggctttacatgttgtgcgttttctgcaaga
gaacgatttttaatgctgggcacttgcacggggcagttgaaactctataatgtattcagt
gggcaggaagaggccagttacaactgccacaactctgccatcacgcaccttgagccatct
agggatgggtctttattgttgacatctgctacgtggagccaaccactgtctgcattgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggcgtcctctgg
gatgtcagatcagcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccatcccaatgggctagaggtcatagtcaacacagaaatctgggacctccgaact
ttccatttgttacacacagtacctgcactggatcagtgtcgtgtagtcttcaattatact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgagaagtccgtttggctcttctttcagaacatttaatgcaactgattataaacct
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggactgc
tatctggctgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactatatgaagtgggcaggcagcggttggcagaagatgaagaggatgaagaagaagat
caggaggaagaagagcaagaggaagaagatgatgatgaagatgatgacgatacagatgac
cttgatgaactagatacggaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttctccctctgatgatgaggagcttgcc
aacctcctggaagagggagatgagggtgaagatgaagattctgatgctgatgaggaagtc
gagctgattcttggagacactgacagctcagataactctgacttggaggacgacataatc
ctgtctctgaatgagtga
DBGET
integrated database retrieval system
