Opisthocomus hoazin (hoatzin): 104334158
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Entry
104334158 CDS
T08436
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104334158 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104334158 (NDC1)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104334158 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
104334158
NCBI-ProteinID:
XP_009938046
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All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MSVVILVISIFNAEFYAVVPSIPCSRLALIGKIIHPQQVIHSVVHAVMGMLVAWCAAVMT
KGKFQFLAVPCMQSESLDDAVPQMCLNEYHLFFLLSGAFMGYSYSLLYLINNMNYLPFPV
IQQYKYLRFRRSLPLLVKHSCVESLYFVRNFCVVYYFFGYIPKVWISTTMDLRIDSKLHP
LDSLTGLLDLSLFYHAWLCGVFLLITWYIAWLLFKIYATEMHHFPVQPTFAEETDQCLPK
ILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISRECLSLLSDLT
QRLITQQEAAAANGRAKQPAGELKVSPQTPGAAVTDDMSFQLQRSNIVPRASMSSLVKSS
LMPSKTSPGSDVGSPFSSPALNCKMGIPDVSSPWHGPVQSPHVMRRGLKLWTSGSDLQMN
GSHHESFPVLSAARVGSEAVQPSFIYTWLQNKQEQIKNFLSKRVLIMYFFSKHPEASIEA
VFSDTQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILSTLLTLQEVIDRHFKLPHVSS
KPPRISGSLVDTSYKTLRFALRASLKTALYRITAVFGEHLNAVQVSTEHKKRLQQFLEYK
E
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgatactagtaataagcatcttcaacgctgaattttatgcagttgtgcca
tcaataccatgctctcggttagcactgataggaaaaattattcaccctcagcaagttatc
cattcggttgttcatgctgtaatgggaatgttggttgcttggtgcgctgcagttatgaca
aaagggaagttccagtttcttgctgtgccctgcatgcagtcagaaagtctagatgatgct
gttcctcagatgtgcctaaatgaatatcacctcttttttctactttctggagctttcatg
ggatacagttacagtcttttgtatcttattaacaatatgaattatttgccatttccagtc
atacagcaatacaagtacttacgtttcagaagatctttgcctctcctcgttaaacacagt
tgtgtggaatcgctatattttgttagaaacttctgtgtcgtgtattacttttttggttat
atcccgaaggtgtggataagtaccacaatggatcttcgtatagacagtaaattgcatccc
cttgactctctgactggcttattggatctctccttgttttaccacgcctggttatgtggc
gtatttcttctgattacctggtacattgcatggttactcttcaaaatctatgctacagag
atgcatcattttcctgtccagccaacttttgctgaggagacagaccagtgcctgcctaaa
atcttaaacagcaaccctccccttattataaagtttttggccttacaagacttgatgtta
ctttcccagtattctcctgttcgacgacaggaagtctttagccttagtcagccaggtggg
cacccgcacaactggactgcgatatcgagggaatgtttgagtctgctgagtgacctgacc
cagaggctgatcacacagcaggaagctgcggcagcaaatgggagagcaaagcagccagca
ggagagctgaaagtatctccacagactccaggagctgctgtgacagacgacatgtctttc
cagttacagaggtctaatattgttcccagagcctccatgtcttcactggttaaatcgtct
ctaatgccttcaaagacatcgcctgggtctgatgttggttcgcctttcagctcacctgct
ctaaattgcaagatgggaattccggatgtaagctctccttggcatggaccagtccaaagt
cctcatgttatgagaaggggactaaagctgtggacatcaggttcagatctgcaaatgaat
ggttcccaccacgaatccttcccagtgctctctgctgcaagagttggcagtgaggcagtg
cagccaagctttatttacacatggcttcagaacaagcaagaacagataaaaaacttcttg
tcaaaacgagtgctgataatgtatttcttcagcaagcacccagaagcttccatcgaagct
gtcttctccgatacccaaatgcacatctgggctttggagggtctgtctcatttggtagca
gcctcctttactgaagaccagtttggagttgtccagactacattgccagctatcctgagt
actttactgactcttcaggaggtcatagacagacatttcaaactgcctcatgtttctagc
aagccccccaggatttcgggaagtctggtggacacatcctacaaaacgctacggtttgca
cttagggcatctctgaaaacagcgctataccggataactgctgtctttggagaacactta
aatgcagtgcaagtgtctacagaacataagaaaagactgcagcaattcttggaatacaaa
gaataa
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