Opisthocomus hoazin (hoatzin): 104334279
Help
Entry
104334279 CDS
T08436
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104334279 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oha03032
]
104334279 (POLA1)
Enzymes [BR:
oha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104334279 (POLA1)
DNA replication proteins [BR:
oha03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
104334279 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
104334279
NCBI-ProteinID:
XP_009938184
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MQESESFAVSRSRREKKSRKGRQEALERLKKVKAGEKIKYEVEEFTGVYEEIDEEEYSKM
VRERQDDDWIVDDGGIGYVEDGREIFDEDLDDDAFGSSKKGKGGKTSTVDKKNVKKSAVS
KPNTIKSMFIASAGKKNTDKTVDLSKDDLLGDILQDLNAETVQISPPPIIMLKRKRSAGV
PLNPFSVQSQTPKVITSVSKKAPAQLGKEALSPASFHPKHPSYTEKSVIVSENEDTKYVQ
KATENGRVVKTIEEKAIEVLCATLPDDDQGMMDFPEEDFDEPMEAEHVETIPETAESLKR
DKEIEKKETEQLESETKETSVFCSLPDVSCWDRIDEDEDDLVVAEVQLDPNLLPLVNGEN
DDQVLRFYWLDAYEDQYNQPGVVFLFGKVWIESANTYVSCCVTVKNIERTVYLLPRETEI
DLSTGKETETPVTIMSVFKEFNDCISPKYKIMKFKSKKVEKYYAFEIPDVPAKSEYLEVK
YSAECPRLPQDLKGQTFSHAFGTNTSSLELLLMSRKIKGPCWLEIKNPQPSNQSVSWCKV
EAVAMKPGLVNVVKDLPPPPPLVVMCLSMKITQNPKTHQNEIVAVAALIHQKFPLDKAPP
QPPFQTHFCVVSKPNDCIFPYDFKEAIKKKNAKIEIAATERTLLGFFLAKIHKIDPDVVV
GHNIYGFDLEVLLQRINVCKVPHWSKIGRLRRSNMPKLGGRGGFAERNAACGRMICDVEI
SAKELIRCKSYHLSELVRQILKTERITILPEEIRNMYSDSPHLMVMLENTWTDAKFILQI
MCELNVLPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYIVPDKQVCKKPTQK
LVDEDEDFEDQNKSKIGKKKAAYTGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICF
TTVQRLSSEAQKRAEVEEEEEIPELPDPSLEMGVLPKEIRKLVERRRQVKQLMKQPDLNP
DLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMNL
EVIYGDTDSIMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYA
ALTVEPTGDGKYITKQELKGLDIVRRDWCDLAKETGNYIIGQILSDQPRDIIVENIQRRL
IEIGENVTNGQIPVNQFEINKALTKDPQDYPDKKNLPHVHVAMWINSQGGRKVKAGDTVS
YIICQDGSDLGASQRAYAPEQLQKQDNLTVDTQYYLSQQIHPVVARICEPIEGIDSVLIA
TWLGLDPSQFRVHHHYHKDEENDALVGGPAQLTDEEKYRDCERFKFCCLKCGTENIYDNV
FDGSGRFIEPSLQRCSKTECEEPPFNYVVQMNNKLLLDIRRYIRKYYNGWLVCEEPTCQN
RTRRLPLSFSRSGPVCQACRKAVLRPEYSDKALYTQLCFYRYIFDVEYAMDKVISEDDKE
YFKKKPLRREVTEAYKRLKSTVDKCLSTSGYSEVNLGKLFTVSMGRSVGESSNDKQ
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagtctgaaagttttgcagtatcgcgttctaggcgcgagaagaagtctagaaag
ggccggcaggaagcactggaacgcctgaaaaaagtcaaagccggagaaaaaattaaatat
gaggttgaggagttcacaggtgtttatgaagaaatagatgaggaagaatactccaagatg
gtcagagaacgtcaggatgatgactggattgttgatgatggtgggataggttatgtagaa
gatggaagggaaatctttgatgaagatctggatgatgatgcttttgggtccagtaagaaa
ggaaaaggtggcaaaacatcgacggttgataaaaagaatgtgaaaaaatctgcggtgtca
aagccaaacacaattaagtctatgtttatagccagtgctgggaagaaaaacaccgataaa
accgtggacctgtcaaaggatgatttactaggggatattcttcaagatcttaatgctgaa
actgttcagataagtccgccaccaattataatgctgaaaaggaaaagatctgctggagta
ccactgaatcctttctctgtgcagtcccaaactccgaaggtaatcacctctgtgtcaaag
aaagctcctgctcagctcggaaaggaagctctttctccagcttcatttcatcctaaacat
cccagttacacagaaaaatctgtcatagtctctgaaaatgaggataccaagtatgtgcag
aaagctacagaaaatgggcgagtagtgaagacaatagaggagaaggctattgaagttctg
tgtgcaacacttccagatgatgatcagggaatgatggattttcctgaggaggacttcgat
gaacctatggaggcagagcatgtggaaactatacctgagacagctgaaagcttgaagaga
gacaaggaaattgaaaagaaagagacagagcagctggaatcagagacaaaagagacatct
gtcttttgttctctcccggatgtctcatgttgggacagaattgatgaggatgaagatgat
ctagtagtggcggaagtccagctggaccccaatctacttccacttgtgaatggggagaat
gatgatcaagtcttaagattttattggctggatgcttatgaagatcagtacaatcagcca
ggtgtggtatttttgtttggcaaagtttggattgaatctgcaaacacctatgtcagctgt
tgtgtgacagtgaaaaatattgagagaactgtttatctactgccacgtgaaacagaaatt
gacctatccactggcaaagagacggagactccggtaactataatgagtgttttcaaggaa
tttaatgactgcatttcaccaaagtataagatcatgaagttcaaatccaagaaagtggaa
aaatattatgcttttgagatcccggatgttccagcaaaatccgaatacttagaagtcaaa
tattcggctgaatgccctcggcttccccaagatctgaaaggacaaacattttcacatgca
tttggaactaacacctctagtctggaacttctgttgatgagtaggaagatcaaaggacca
tgctggctggaaataaaaaacccacagccttcaaatcagtcagtcagctggtgtaaggtg
gaggctgtggccatgaagcctggcttggtgaacgtggttaaagatcttcctcctcctcct
cctctcgtggtcatgtgcctcagcatgaagatcactcagaacccaaagactcaccagaat
gagattgtggctgttgcagctctgattcaccagaaatttcctctggataaggctccacct
cagcctccttttcagacgcacttctgtgttgtttccaaaccgaacgattgcatttttcct
tatgacttcaaagaagctattaaaaagaagaatgctaaaatagaaattgctgcaacagag
agaacactgctgggatttttccttgcaaagattcacaaaattgacccagatgttgttgtg
ggtcataatatttatggatttgatctggaagtgctgcttcaaagaattaatgtgtgcaaa
gtccctcactggtccaagataggtcgactgaggaggtccaatatgccaaagcttgggggt
cgaggagggtttgctgagaggaatgctgcctgcggtcgaatgatctgtgatgtagaaatt
tctgctaaagaattaattcgttgcaaaagttaccatttgtctgaactggtccgccagatt
ttgaaaacagagaggataacaattctaccagaagaaattcgaaatatgtacagtgattct
cctcacttaatggtcatgctggaaaacacctggacagatgccaagttcattctccagatc
atgtgtgagctgaatgttctgccactggctcttcaaataacaaacatctctgggaatgtc
atgtcaaggacaatgatgggaggacgatctgaacgcaatgagttcttgctgctccatgca
tttcatgaaaaagactacatagtgccagacaaacaagtgtgtaaaaagcctactcagaag
ctggtggatgaagatgaagattttgaagatcagaataaatcaaagatagggaaaaagaaa
gcagcatatactgggggattagtcttggatcccaaagtcggtttttatgacaagtttgtt
ttgcttctcgacttcaacagcttgtacccatcgattatccaggagtttaacatctgcttt
accacagtgcagcgactgtcatcagaagcacagaaaagggcagaggttgaagaagaggaa
gaaattccagagcttccggacccttctctggagatgggagttttgcctaaagaaatcagg
aaactggtggagagaaggcgtcaagttaagcagttaatgaaacagccagatctaaatcct
gacctttatttacagtatgatatcaggcagaaagctttgaaactcaccgctaacagtatg
tatggctgcctgggattttcctacagcagattctacgccaagcctttggctgctttggtg
acacataaagggagagagattttgatgcataccaaggagatggtgcaaaagatgaacctt
gaagtgatttatggagacacagattccattatgataaacactaatagcaccaatttggat
gaggtcttcaagctggggaacaagatcaaaagtgaagtgaacaagctctataaattgttg
gaaattgatattgatggagtctttaagtccttgctactgttaaagaagaagaaatatgct
gctctgactgtggaaccaacaggagatgggaaatacataactaaacaagaattgaaagga
ttggatatagtccgcagagactggtgtgatcttgcaaaagagactggaaactatataatt
ggtcagattctttctgatcagccccgagacataattgtggaaaatattcaaaggcggctt
attgaaattggagaaaatgtgaccaatggccagatcccagtaaatcagtttgaaataaac
aaggcattgacaaaagatccacaggattatcctgacaaaaaaaacttgccacatgtgcac
gttgccatgtggataaactctcaaggaggccgaaaggtgaaggcaggagacacagtgtca
tatatcatttgtcaggatggatcagatctcggtgccagccagcgagcatatgctccagaa
cagttgcaaaagcaagacaatcttactgttgatactcagtactacctgtcacagcagata
catccagtagttgctagaatatgtgagcccatagagggaattgattctgttcttattgca
acgtggttaggactggatccttcccaattccgagtccatcaccattaccataaagatgag
gagaacgatgctttggttggtggcccagctcagctcactgatgaggagaaatatagggat
tgtgaaagattcaagttttgttgccttaaatgcggaacggaaaatatttatgacaatgtc
tttgatggttcggggcgatttattgaacccagcttgcaaaggtgcagtaagactgaatgt
gaagagcctcctttcaactatgtagttcaaatgaacaacaaattactgctggatattaga
cgctacatcagaaaatactataatggttggttagtatgtgaggagccaacttgccagaat
cgaacccgtcgacttcccctgagtttctcccggagtggccctgtgtgccaggcgtgcaga
aaggctgttctgagaccagagtattctgataaggccctgtacactcagctctgcttttac
cgatacatttttgatgtggaatatgcaatggataaagtgattagtgaagatgataaagag
tatttcaagaagaagccactcaggagggaagtcactgaggcctacaaaagactgaagagc
acggtagacaaatgtctgtccacgagcggctactcagaagtgaacctcggcaaactcttc
accgtcagtatgggaagatctgtgggagagtccagcaacgacaaacagtga
DBGET
integrated database retrieval system
