Opisthocomus hoazin (hoatzin): 104334462
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Entry
104334462 CDS
T08436
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oha03041
]
104334462 (DDX43)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104334462 (DDX43)
Spliceosome [BR:
oha03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104334462 (DDX43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
Mur_ligase_C
MOEP19
Motif
Other DBs
NCBI-GeneID:
104334462
NCBI-ProteinID:
XP_009938396
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MESSPLGGRGGTKIRELEDSSGSRIKVIKGTYEAEVKIFGSAAVQNKAKMLIDDAVTRSG
QNYIRGKTLDIIKPENSPKKSVIDWASLRENKAKYEAMKWADLPPIEKNFYKESPRTASM
SQEEVELWRKENNNIICDDLKEGEKRCIPNPICKFEDVFEHYPDLMAHIRKVGFQKPTPI
QSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLTSQPISKDQRGGPGMLVLAPTREL
ALQVEAECSKYTYKGIKSICIYGGGDRRGQIDVVTKGVDIIIATPGRLNDLQMNNFINLK
TITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMTSATWPDGVRRLAKSYLKNPMIV
YVGTLDLAAVNTVEQRVVVIAEEEKRAFMQDFIDSMKPEDKVIMFVGKKLTADDLASDFS
LQGVPVQSLHGNREQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNI
EEYVHRVGRTGRAGRTGEAVTLVTKRDWRFASELIEILERANQVVPSELIAMAERYKQFQ
IRKEMEKDMRRPPRKPSK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcacccttgggaggtcgcggcggaactaaaataagagaacttgaggattct
tcaggttccaggataaaggttataaagggaacctatgaagctgaagtaaagatttttggc
agtgctgctgtgcaaaacaaagccaagatgttgattgatgatgctgttacaagatctgga
caaaactacattagaggaaaaacattggacattatcaagcctgaaaatagcccaaagaaa
tctgtgattgactgggcctctcttcgagaaaacaaagctaaatatgaagctatgaagtgg
gcagacttgccaccaattgagaaaaacttctataaagaatcgccaaggactgcttctatg
tcacaagaagaagtggaactgtggcggaaagaaaataataacataatttgtgatgactta
aaagaaggtgaaaagcgttgcattcccaatcctatatgtaaatttgaagatgtatttgag
cattatcctgaccttatggctcatataagaaaagttggttttcaaaagcctacaccaatt
cagtcccaggcatggccgatcatactccaaggaattgatcttattggtatagcgcagact
ggtaccgggaagacattagcgtacttaatgcctggattcattcacttgacttcacaacca
atatccaaagatcagcgtggggggccaggaatgttagtccttgctcccactcgagaactg
gcacttcaagtagaggcagagtgttcgaagtacacgtacaaaggaattaaaagtatttgc
atatatggtggtggggaccgaagaggacagatagatgtggttaccaaaggtgtggatatc
attattgctactcctggcagattgaatgatcttcaaatgaacaacttcataaatttgaag
accataacatacttggttttagatgaggctgacagaatgttggatatgggatttgaacct
cagataatgaagatcctaatagatgtgcggcctgatagacaaactgttatgacgagtgct
acttggcctgatggtgttcgtcgcctagcaaaatcctatttgaaaaatcctatgattgtg
tatgttggtactcttgacttagcagcagtaaatacagtagaacagagagttgttgttatt
gctgaggaggaaaagagagctttcatgcaagacttcattgactctatgaagccagaagat
aaggtcatcatgtttgtggggaaaaaacttacagctgatgacttagcaagcgactttagt
ctccaaggagttccagtacagtcacttcatggtaacagggaacagtgtgatcgagaacag
gctttagatgacttcaagaaaggcaaagtcagaatactggtagctactgacttagcatcc
cgtggactcgatgtgcatgatataactcatgtttttaactttgacttccctcgcaacatt
gaagaatatgttcatagagtaggtcgtactggaagagcaggacgtactggggaggcagta
acgcttgtcactaagagagattggaggtttgcatctgagctgattgaaattctggaaaga
gcaaaccaagtagttcctagtgagcttattgcaatggcagaaagatacaaacaatttcaa
atcagaaaagaaatggaaaaggatatgcgaagacctccgagaaagccctcaaaataa
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