Opisthocomus hoazin (hoatzin): 104335208 Help Entry 104335208         CDS       T08436                                  Symbol HTT Name (RefSeq) huntingtin   KO K04533   huntingtin Organism oha  Opisthocomus hoazin (hoatzin) Brite KEGG Orthology (KO) [BR:oha00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oha03019]     104335208 (HTT)    04131 Membrane trafficking [BR:oha04131]     104335208 (HTT)    03029 Mitochondrial biogenesis [BR:oha03029]     104335208 (HTT) Messenger RNA biogenesis [BR:oha03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      104335208 (HTT) Membrane trafficking [BR:oha04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     104335208 (HTT) Mitochondrial biogenesis [BR:oha03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     104335208 (HTT) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_EF3_N Rad26-like_helical_rpts Motif Other DBs NCBI-GeneID:  104335208 NCBI-ProteinID:  XP_009939221 LinkDB All DBs Position Unknown AA seq 3080 aa AA seqDB search MVDLIELFKFQELARQRSSRKKELSTTKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIA MELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGASRSLRAALW RFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPKIMAAFGNFANDNEI KVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNVLLGLLVPVEDDHPT LLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQLIQVYELTLHYTQHQ DHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDESASRNRSGSIVELIAGGG SSCSPVLSRKHKGKILLGEEEGLEDDPETRSDVSAASFAASVKGEITSELASSSGVSTAG SVGSSAADSTGHDIITEQPRSQHTLQSDSVDLSSCDLTSTATEGEEDDILSRSSSQISAV QSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGAEGQYSGMQIGQLQD EEDEAANILQDDSSESFRNSSIALQQPHLLKTICHSRQPSDSSVDRFTSKEDAADPGDHE NKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGEKGAISHTELLINLKTNYGCVGAA VALHPESFFSKLYKTPLEAMGGEYEEQYVSDILNYIDHGDPQIRGATAILCGTIVNSILT KSRFDVEKRLINVRNSTGNLFSLVDCIPLLQKTLEDESSVTCKLACTAVRHCIMSLCSSS YSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEGRTESLHRGVHHYTGLL KLQGRVLNDVVICLLGDEDPRVRHVAAASLVRLVPKLFYNCDQGQADPVVAVARDQSSVY LKLLMHETQPPSHFAVSTITRTYRGYNMLPSPTDITMENNLSRVIAAISHALTISTTRAL TFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSPSDEAQKGCTIGMAGMVLSLLSSAWFPL DLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEPWPALADRTLVTLVEQL FSHLLKVINICAHVMDDVAPGPALKAALPSLTNPPSLSPIRRKGKERESVEQASVPMSPK KSGETSPATRQSDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKATHANYKVTLDLQNSNE KFGSFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREPTMATVCVQQLLKTLFG TNLASQYDGLSSNPSKAQGKAQRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQA EQEHDASGWFDVLQKVSTQLKTSITSATKHRADKNAIHSHIRLFEPLVIKALKQYTTTTS VQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFL VLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAG KELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQ QMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMASVSTVQLWISGILAILR VLISQSTEDIVLSRIQELSFSPYLISCQAINRLRCGENNIATPEDRTEVKQAKYLPEETF SRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAAT RLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVNYTNYNWWSEVHQTPKR HSLSTTKLLSPQISGDSDESNSESKRGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLI VNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLAAPTTLKKTLQCLEGI HLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATLQNSITQLPVEELDRIQ EYLQSSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDGEDQPALENVILDKDWY VSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSLLAPCLSLGMSEISRDQ KSSFFETARRVTLDHVSTTVQNLPANHQVFQPLLPAEPSAYWKKLSDIFGEEVMYRSMMT LCRALAQYLLLLSKLPARLRVPPDKEDDILKFVVMSIEALSWHLMNDQIPLSIDLQAALD CCCLTLQQPSLWNLLASALNVTYACSLINCIRFIIETVAVEPGNQLLSPERKKNTSKGLS EGDVDSNTQKMKHITAACEMVAEMVECLQTVLALGHKRNSSIPAFLTPVLKNIIVSLARL PLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIFKEFIYRINTLGWISRT QFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAITSLVLSAMTIPVAGNP AVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRDNIATHHLYQAWDPVPS LSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGNNITPLREEEWGEDEED ENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPSNPSKRTPVILISEVVR SLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPATCKAAAVLGMDKAVAEP VSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPIISDYLLSNLRGVAHCVN IHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGSDESTPSIIYHCVLRGL ERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCMYTGKEKISPSRTTDVN PAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDDFFPPQDVMNKVIGEFL SNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVS ASTSQWISAILPHVISRMGKSEQVDVNIFCLVAIDFYRHQIDEELDRRAFQSVFEVVASP GTPYHRLLTCLQNVHKVTAC NT seq 9243 nt NT seq  +upstreamnt  +downstreamnt atggttgatttaatagaactctttaagtttcaagaacttgccagacaaagaagttcgaga aagaaagaactttcaactaccaagaaagatcgagtgaatcattgcctaacaatatgtgaa aacatagttgctcagtctttaagaaattctccagaatttcagaaactgctggggattgct atggagctgttccttctctgcagtgaggatgcagaatctgatgtccggatggttgctgat gaatgccttaataaagttattaaagctttgatggattccaatcttcctaggctacaatta gaactgtataaagagattaaaaagaatggtgcttccagaagcctacgtgctgcactctgg agatttgctgagcttgcacatctagttcggcctcagaaatgcaggccgtacttagtgaac cttttgccttgtctaacgcgaataagcaagagacctgaagaatcagtccaagagacacta gctgcggcaataccaaaaatcatggcagcgtttggcaattttgcaaatgacaatgagatt aaggttttattgaaggctttcatagctaatcttaaatccagttcccctactatccgtcga acagcagcaggatcagcagtaagcatctgtcaacattcgcgaagaatgcagtatttttat gcctggttattgaatgtacttttaggcttgttggttcctgtagaagacgatcatcctact ctcctaattctgggtgttttacttacactaaggtatctcatacctttattgcaacaacaa gtaaaggataccagcctgaaaggcagttttggcgtaacaagaaaagaaacagagatttcg ccttcaccggaacaacttatacaggtttatgaattaactctgcattacacccagcatcag gaccataatgttgtgactggagctttagaattattacaacagctctttagaacgccacca cctgaacttctccatgccctgaccgcttcagggggcattgcacaggtcagtgtatccaaa gatgaatctgccagcaggaaccgcagtgggagcatagtggaactaatagctggagggggg tcttcatgcagccctgttctttcgagaaagcataaaggtaaaatacttcttggagaagaa gaaggtttggaggatgatcctgaaaccagatcagatgtcagtgctgcatcgtttgcagct tctgtgaagggcgagataaccagtgaactagcttcttcgtcaggtgtatcgacagctggg tcagtagggagttcagctgctgattctactggacatgatatcattactgagcagccacgt tctcaacatacattacagtcagactctgtagacctgtcaagctgtgatctgacaagtaca gctactgaaggggaagaagatgatattcttagtcgaagctccagccagatcagtgctgtc cagtcagatcccactatggacttgaatgatggcacacaggcttcctcaccgattagcgat agctctcagacaactacagaaggtccagactctgctgtaaccccttcggacagttctgaa attgttttggagggtgccgaaggacagtattcgggaatgcaaattgggcagctgcaggat gaggaagatgaggctgcaaatattcttcaagatgattcatcagagtctttcagaaattct tctattgctcttcaacagccccacctgttgaaaaccatatgccatagtaggcagccttct gatagcagcgtagatagatttacatcaaaagaagatgcagcagatcctggtgatcatgaa aataagccttccagggtaaagggagacataggtcactatactgatggaaattctgctcct ttagtgcactgtgttagacttctgtcagcttcttttctacttactggggagaaaggagct atttctcatacagagttattaattaacttaaaaacaaattatggttgtgttggcgcagct gttgcacttcaccccgagtctttcttcagcaaactgtataaaacaccccttgaagcaatg ggaggagagtatgaggagcagtatgtatcagatattctgaactacattgaccatggagat ccccagattagaggagctacggccattctgtgtggaacaattgtcaactccattctaact aagtcacgctttgatgtggaaaaacggctaataaatgtcagaaactcaacaggaaatctc ttttccttggtagactgcatacctctgttacagaaaacgctggaagatgagtcctctgtt acatgtaagctggcttgtacagctgtgaggcattgcatcatgagcttatgtagtagcagc tacagtgagctaggtttacaattaattgttgacctccttacgctgaagaatagctcatac tggctagtcaggacagaacttctggaaacacttgcagaggtagattttcgactagtcagc ttcttggaagggagaactgagagcttgcacagaggtgttcatcactatactggtctgcta aaacttcaggggagagtgcttaatgatgttgtaatatgtctgcttggagatgaagatcca agagtgagacatgtagctgcagcttcattagtgaggcttgttccaaagctgttttataac tgtgatcaaggacaggctgatccagtcgtggcagtagcaagagaccaaagcagtgtctac ctgaaactactaatgcatgaaacacagcctccatctcactttgcagtgagcactatcact agaacatatagaggttacaatatgctgccaagtccaacagatatcactatggaaaacaat ctctcaagagtcattgcagcaatttcccatgcattgacaatatccactacaagagcactt acgtttggctgctgtgaagctttgtgtcttctctccacaacatttccagtctgcacctgg agcgtgggatggcactgtggtgtttcccagccaagtccttcagatgaagctcagaagggc tgcactattggaatggccggaatggtcctgtctctcctttcatcagcatggttcccactg gacctctctgcacatcaggatgctttgattttgactggaaacttacttgcagcaagtgct cctaagtgcttaaagaatccgtggagtgctgaagaagattcaaaccaaggtgctgcaaag caggaggagccctggccggctctggcggatcgaactcttgttactttagtagaacaactc ttttctcatctgctgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcct ggcccagcgctaaaggcagcattaccttctctcacaaacccaccttctcttagtccaatt cggaggaaggggaaagagagggagtctgtcgaacaggcgtctgtgccaatgagcccgaaa aagagtggtgaaacaagtccagctactaggcaaagtgatgctactgggcctgttccgaca agtaaatcatcttcagtaggaagcttttatcatcttccatcatatctgaagttgtatgat gtcttgaaagcaacccatgctaattataaggttactttggatctccagaacagtaatgaa aagtttggaagtttcttacggtctgccttggatgttctgtctcaaatcttggaacttgct actcttcaagacattggaaagtgtgtagaagaaattttgggatacctaaaatcatgtttc aacagagaaccaacaatggcaacagtttgtgtacagcagttattgaaaacattgtttggg acaaatctggcttctcaatacgatggcttgtcttcaaaccccagcaaggctcaaggcaaa gctcagcgcttaggttcttccagtttgagacctggtctctatcattattgcttcatggca ccatacacacattttacacaggcgcttgctgatgctagtctaaggaacatggttcaggct gagcaggagcacgatgcttcaggatggtttgatgtgctgcaaaaagtttctacacagctg aaaactagcattaccagtgcaacaaaacatcgtgctgataagaatgctattcacagtcac attcgtttatttgaaccccttgtcataaaagcattgaaacaatatactacaacaacatca gtacagctccagaggcaagttctagacttgctcgctcaactggttcagctacgagttaac tactgtcttctggattcggatcaggtgtttattggatttgtgctaaagcagtttgaatac atcgaagtaggacagttcagggagtctgaagcaattatcccaaatatcttctttttcctg gtgttgctgtcttatgagcggtatcattccaaacagataatcggaattcctaagatcatt cagctgtgtgatggtatcatggccagtgggaggaaagctgttacacatgcaataccagct ctgcaacctattgttcatgatctctttgtgttaagaggaacaaataaagctgatgctgga aaagagttggaaacacaaaaggaggtggtggtgtcaatgctgctgagacttattcagtac catcaggtgctagaaatgttcatcttagtattgcaacagtgtcataaagaaaatgaagac aaatggaaaagattgtcccggcagatagctgacattattctcccaatgcttgcaaaacaa cagatgcatatagactctcacgatgctctgggagtactgaacactttgtttgaaattttg gctccttcatcccttcgccctgtggacatgcttttaaggagcatgtttgttactcctaaa acaatggcatcagtgagcactgtccagctatggatttctggaattttagctatccttaga gttctgatttcacagtcaacagaagacatcgttctgtcccgtatacaagagctttccttc tcaccatatttgatttcgtgtcaagcaattaacaggctgagatgcggagaaaataacata gccacaccagaggatcgcactgaggttaaacaggctaagtatctgcctgaagagacattt tctaggttcttactacaactggttggcattctactggaagatattgttaccaaacagttg aaagtggacatgaatgagcagcaacatactttctactgccaggagctgggcacactgctt atgtgcttaatacatatcttcaaatcagggatgttcagaagaatcacagctgcagccacc agactttttacaggagatggatctgatggtagtttctatacccttgaaagtttgagtgac cttgttcagtccatgattcctacgcatccttctttagttctcctctggtgtcaaatcctg cttcttgtcaattataccaactacaactggtggtcagaagtgcatcaaaccccaaagaga catagtctttctacgactaaattgcttagccctcagatatctggagacagtgatgaatcg aattcagaatctaaacgtggcatgtgcaatcgagagatagtgagaagaggggcactcatt cttttttgtgactatgtttgtcaaaacctacatgattcagaacacttgacctggcttatt gtgaatcatgttcaagacttgattaatctgtcccatgagcctccagtacaagactttatt agtgctgttcacaggaattcagcagccagtggtctcttcatccaggccattcagtcacgg tgtgagaatcttgcagctcccacaactctgaagaagactttacagtgcctggagggaata catctcagccagtctggggctgtcttaacattatatgttgataaacttctgtgtactcca ttccgtgtgcttgctcgcatggttgacacactggcttgccgtcgagtagaaatgcttttg gctgcaactttacagaacagcattactcagttaccagttgaagaactggatagaattcag gaatatcttcaaagcagtggattagcaacaagacaccaaagactttactcgctcttggat agatttcgtcttatggtagcaccagacacgacgagtccttcacctctggttacctcacac ccactagatggagaagaccaaccagctttagagaatgtaattctagacaaagactggtat gtgtcactagtgaggtcgcagtgttgcatcaagtcagactcagcgctgctagaaggtgca gagctggtaaataggattcctcagcctgacctgaactccttcatgaccagcaaggaattc aacctaagcttgttagccccttgtttaagccttggcatgagtgaaatctcaagagaccag aagagtagcttctttgaaacagctcggagggtaactctggatcatgtatctaccactgta caaaaccttcctgccaaccaccaggtttttcaaccgctgttgccagctgagccatcagcc tactggaaaaaactaagcgatatctttggagaggaggtgatgtatcggtctatgatgacg ctttgtcgtgcgctggctcagtatttattgttactgtcaaaactaccagctcgtcttcgt gttcctcctgacaaagaggatgatatcctgaaatttgtagttatgtccatagaggctcta tcatggcatttaatgaatgaccagattccgttaagtatagatcttcaggctgctctggat tgttgctgtctgacattacagcagcctagtctctggaatttgctggcttctgcacttaat gtgacatatgcttgctccttaattaattgtattagatttatcatagaaacagttgcagtt gaacctggtaatcaacttcttagccctgaaagaaagaagaatacttcaaaaggcttaagt gagggtgacgtggattcaaacacacagaaaatgaaacacattactgcggcttgtgaaatg gtagcggagatggttgaatgcttacagactgtgttggcactggggcacaaaagaaacagc agtattccagcatttcttactcctgtcctcaagaacatcatcgtcagtttagcaaggctg cctctagtgaacagttacacaagagtacctcccttggtctggaaattaggctggtcaccg aagcctgcaggtgactttggcacagtttttcctgaaatcccagtagaatttcttcaagaa aaagaaatatttaaggaattcatctatcgcattaatacacttggatggatcagccgtact cagtttgaagagacttgggctactttgctcggtgtgcttgtaactcagcctattgtaatg gaccaagaggagaaccaacaagaggaagatacagagaggacccaaattaatgttcttgca gtacaagccatcacttccttggtgctgagtgccatgacaatacctgttgcaggcaatcca gcagttagctgtttggaacagcagccccgcaacaaagctttaaaagctctggacacaagg ttcgggaggaagctaagtgttatcaggggaattgttgaacaggaaatccaagcaatggta tccaagagagataatattgctactcatcacttataccaagcttgggaccctgttccatcg ctttctcctgctacaacaggtgctcttatcagccatgaaaaactcttactgcagatcaat actgaacgagaaataggagatatggattataaactgggacaggtgtctatacactccata tggttgggaaataatatcactccattgagagaagaagagtggggtgaggatgaagaagat gagaatgacatacctgctccttcctcaccaccaacctctcctataaacaccaggaaacac cgggctggtgtagatatacattcttgttctcagttcttgcttgaactgtatagtcagtgg atattgccatcaaaccctagcaagagaacaccagtcattttgattagcgaagtggtgcga tcacttctggcagtatcagacttatttacggaaaggaatcagtttgagatgatgtataca acattgacagaattgcgaaaggtgcatccatcagaagatgagattcttgtacagtatttg ataccagccacttgtaaagctgctgctgttcttggaatggataaagctgtggctgaacca gtaagtcgactgctggaatcaaccctaagaagcacccatatgccaagtaggattggagct ctgcatggaattctttatatccttgagtgtgacttgcttgatgagacagcgaagcaactc attccaattatcagcgactatctgctctccaatttgagaggagtcgcacattgtgtgaat atccataaccaacagcacatcttggtgatgtgtgcagctgctttctatttgattgaaaat tacccacttgatgtagggcctgaattctctgcaggaattatacagatgtgtggagtcatg gtgtctggaagtgatgaatcaacgccatccattatttatcattgtgtcctgagaggatta gaacgactcctgctttcagagcaactttctaggctggatagtgaatcgctagttaaactg agtgttgacagagtgaatgtgcagagcccccacagagcaatggcagcacttggattaatg ctgacttgcatgtacacaggaaaggaaaaaatcagccccagtcgtaccacagatgtaaac cctgctgctcctgacagtgaatctgtgatcgtagctatggaacgagtatctgtccttttt gataggatcaggaagggatttccttttgaagctagagtagtggctcggatccttccacag ttccttgatgattttttccccccacaagatgtaatgaataaagttattggagaattttta tccaatcagcagccttacccgcagttcatggcaacagtagtttataaggtattccagaca ctacatagcactggacaatcctcaatggtccgtgactgggtgatgctgtctctctctaat ttcacacaaagaacacctgtggcaatggcaatgtggagtctttcctgtttttttgtcagt gcttccaccagtcaatggatttcagcaattcttccacatgttatcagcagaatgggaaaa tctgagcaagtggatgttaacatcttctgtttggtggccatagacttttaccggcatcaa atagatgaagaattagatcggagggccttccagtcggtgtttgaggtggtagcatctcca ggaaccccgtatcatcgactgctaacttgtttgcaaaacgtccacaaggttacagcatgt tga

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