Opisthocomus hoazin (hoatzin): 104335283
Help
Entry
104335283 CDS
T08436
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104335283 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oha04131
]
104335283 (TGFBRAP1)
Membrane trafficking [BR:
oha04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104335283 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
104335283
NCBI-ProteinID:
XP_009939308
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEKISTAGKI
TFAATKQLHKYLGLKKPVNELKAASALTRLLVLCDNTITLVNMMNLEPVPTGARIKGAVT
FALNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVAVDGYYLC
LALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFATVDGISQH
APVHWSENVVGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGKVIVAT
NKGVYILVPLPLEKQIQDLLASHRVEEALLLAKGARRNIPKEKFQVMYKRILQQAGFIQF
AQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLTQGDQEKM
TKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFCLLTDSAA
WLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGHIEDSTRSDLYEYIVDFLTFCSDQDL
VWKYSEWVLQKNEEVGIQIFTKRPLEEQEKNINPDDIISCLNKYPKARVKYLEHLVLERK
IEKEKYHTHLAVLYLEEILQLKSVTTDNCTETTELLVKLRSLLQKSDLYRINFILEKIQG
TDLHMENAILYGKLEEHEKALHILVHELKDFRAAEEYCVWNSENRDTQYRRRLFHMLLSV
YLNPGASDCALVMAAVDLLNNHAAEFDTALVLQLVPDSWSVQLLSPFLAGAVRQSIHTKR
MTQAALGLAQAENLIYKYEKVKQKGTPILLSDKKVCQVCQNPFCEPVFVRYPNGGMVHTH
CAANRHLNSTMTHHSSSSSNQT
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaaagctttcaaactcgtttctgctgttgagcgggagatgttaatgggagac
aaaaattacatcaacatcgaatgcattgagtgctgcggaaagaacctctatattggaacc
aacgactgctttatctatcactttctgttggacgaaaagatatcaacagctggaaaaata
acttttgctgccaccaaacaactgcataagtacctgggcttgaagaagcccgtgaatgag
ttgaaagcagcctctgccctcaccaggcttcttgtgctttgcgacaacacaataacacta
gttaacatgatgaacttggaacctgtccccactggcgctagaatcaagggagctgtgacg
tttgcattaaatgaaaaccctgtgagtggggatcctttctgtgtcgaagtctgcattatc
tcggtgaagcggcggaccattcaaatgttcatggtgtttgaagacagagtccagatagtg
aaggaagtgtttactccagagcaaccctgtgctgtggctgtagatggttattacttatgt
cttgcacttactacacagtatataattttgaattataatactggcgtctcccaggatctg
tttccttattgcagtgatgagaaacgaccaattgtgaaaaggataggcagacaagagttt
ctgttggctggccccggaggcctaggcatgtttgcaactgtagacggcatttcgcagcat
gcccctgtgcactggtcagagaacgtggttggagcagctttgtgctttccttacgtggtt
gctctcgatgatgagttcattacagtgcacagcatgctggaccagcagcaaaagcaaacc
ctgccttttaaagaaggtcacattctacaggactttgaaggaaaggtgattgttgctacc
aataagggtgtgtatatcttggtgccgctgcctttggaaaaacagattcaggaccttctg
gctagccacagagtggaagaagcccttcttcttgcaaaaggagctcgaaggaatattcca
aaagagaaatttcaggtgatgtacaaacgaatcctgcagcaagcaggttttatacagttt
gcacagcttcagttccttgaagcaaaagaactcttcagaagcggccagcttgatgtccgg
gagctgatctctctctaccccttcctgttgcctacttcttcttcatttatacggtctcat
ccccctctgcatgagtacgcggacctaaaccagctgacccaaggggaccaggagaagatg
acaaaatgcaaacgattcctcatgagttacttgaacgaagtccgcagcactgaggttgcc
aatggctacaaggaagatattgacacagctttactcaagctgtatgcagaggcaaatcat
gaaagccttctggatctgctagtttcagagaacttctgtcttttaacagatagtgctgcc
tggctggaaaaacacaaaaagtattttgcccttggtctcctgtatcactacaatggtcag
gatgctgcagcgcttcagttatgggtgaaaatagttgatggacacattgaagattctaca
cgttcagatctctatgaatacatagtagacttccttacattctgctcagaccaagatcta
gtgtggaaatactctgaatgggttttacaaaaaaatgaagaggttggcatacagattttc
actaaaaggcctttggaagaacaggagaaaaacattaatccagatgatatcatcagttgt
cttaacaaataccctaaagcacgtgttaaatatctagaacatctagtattggaaaggaaa
atagagaaagagaagtaccatactcatctagctgtcttgtacttggaggaaatacttcag
ctaaaatctgtaaccacagataattgtacagaaacaactgaactgctggttaaactacgc
agtcttcttcagaaatctgatctttatagaattaattttattttggaaaaaatccagggc
acagaccttcatatggaaaatgcgattttgtatggaaaactagaagaacatgagaaggct
ttgcatattctagtccacgagttaaaggacttccgtgctgcggaagagtactgtgtatgg
aactctgagaacagagacacgcagtacagacggaggcttttccacatgctgctgtcagtg
tatctaaatccaggcgcttcggattgtgcactagtcatggctgctgtggatctcttgaat
aaccacgctgctgaatttgacacggctctagttttgcagctggtgcctgacagctggtca
gtgcagctcctctcgccgttcctggctggagcagtgaggcagagcattcatacaaaaaga
atgactcaggctgcccttgggttagcacaagctgaaaacttaatctacaaatacgagaag
gttaaacaaaaaggaaccccaattcttctttcggacaaaaaggtctgtcaggtgtgccaa
aatcctttctgcgagcctgtatttgtaagatacccaaatgggggtatggtccacacacac
tgtgctgcaaatagacatctgaattcaaccatgactcatcactcttccagctccagcaat
cagacttga
DBGET
integrated database retrieval system
