Opisthocomus hoazin (hoatzin): 104335457
Help
Entry
104335457 CDS
T08436
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oha03036
]
104335457 (HFM1)
Enzymes [BR:
oha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104335457 (HFM1)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104335457 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
104335457
NCBI-ProteinID:
XP_009939491
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MFNSADVVFSSDNLFYERPDTRQRNLENEEPKFWCIAPAPAIADIPAAEELQRELEKNTA
NTHLGGRKHQKFIQQCKSNTEEVNDKSPTPVHFGVASEKEVLQLSVGEREKNSFQCESLK
MVSLFLSSDQEKSKTGTGVSPQPGANFSQNKILSNLPENSDDESVHSTLRKSLFKMSGYM
YKNTAFKGSSVDVKEIDTSVNTRENMKEVRKGLWRSNHHAAVTKDSDFTLHRVNNRDIES
KNGIKMKSLSNASEILDMTGTAGRKLEILRAVTEIPTQFRSIFKEFPYFNYAQSKALDDL
LYTDRNFVICAPTGSGKTVMFELAITRLLMEAPLPWLNIKVVYMAPIKALCSQRFDDWKE
KFGPIGLSCKELTGDTVMDDLFEIHHAHIIITTPEKWDSMTRRWRDNSVVQLVRLFLIDE
VHVIKDESRGATLEVVVSRMKTVQSSLSRLLENHDTVPPMRFVAVSATIPNAEDIAEWLS
DSKMPAVCLKIDEDQRPVKLRKIVLGFPCSDNQTEFRFDLTLNYKIASIIQTYSEQKPAL
VFCATRKGVQQAASVLAKDAKFLLSVEQKQRLQRSANSLKDSKLRDLLIYGVAYHHAGME
ISDRKIIEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGVFQEYSETDILQM
IGRAGRPQFDTTATAVIMTRWSTREKYIQMLNGADIIESSLHRHLVEHLNAEIVLHTVTD
VTVALEWIRSTFLYIRALKNPTHYGFSSGLDKIGIEAKLQELCLKNLNDLSAFDLIRMDE
ANNFKPTETGILMAWYYIAFDTVKQFFTIKGTETLNELIKMISNCTEFLDVKLRTNEKKI
LNSLNKDKDKITIRFPMEGKIKTREMKINCLIQAQLGCIPIQDFTLTQDTGRIFRNGLRV
TRWLSDFLASCKNNFSALLNSLILAKCFRCKLWENSLHVSKQLEKIGVSLSNAMVNAGLT
SFKKIEDTNARELELILNRHPPFGNQIKESVLHLPKYELDIEQLPKYSDTSAEILVTIKL
KNYEQLQTKRTATDFHYVTLVIGDADNQVIFNQKIMDSVLLKTGNWTKKTEVKRALKSEE
ISINLISSDYGGRSKQEITYKKYGNRECNHRCKNKDVCGHDCCKTGVLPISEMNGDSKFS
LYLADLRSRNSVSSVPPVKRLKMQMLNQTQNMDLKQFVFTPKSSLPALPRSSDKQLSSSP
SADQVDNVNSLGIFQKQPQSWNYGKSNALDVDFELRDDVWDDIDDEKLVFASNFASRELD
ECEPLCQSTRSKATNDISKDACTVQDETNIQNSDVSVVSSTPKVNFSVQSGNINMFSFQE
KKHSNPSQELKSVQCSPISKMISDSSKFTRKEDFFIFTKEQDKVDPRYLLDDEISDVKPL
LGIFDDIL
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactctgcagatgtggtcttttcatcggataatttattttatgaaagaccagat
acaagacaaaggaatctagaaaatgaagagcctaagttttggtgtattgcacctgctcca
gctattgctgacattccagctgcagaggagttacagagggaacttgaaaaaaacacagcc
aacactcatctgggagggagaaagcaccagaagtttatacaacaatgtaagagtaacact
gaggaagtaaatgataaatcaccaacacctgttcattttggagtagcctctgaaaaagaa
gtgctccaattaagtgtaggagaaagagagaaaaatagttttcagtgtgaaagtctgaaa
atggtttcattgtttctctcttctgaccaagaaaaatctaaaacaggaacaggggtttct
ccgcaacctggtgcaaatttttcacaaaataaaatattaagtaatcttccagaaaacagt
gatgatgagagtgtccattcaacactgagaaaaagcttatttaaaatgtctggttatatg
tacaaaaatacagcatttaaaggtagttctgtggatgtgaaagaaattgatacttccgta
aatacaagagaaaacatgaaagaagtgagaaaaggtttatggagaagtaatcatcatgct
gcagtaactaaagactcagattttactctgcatagggtaaataacagggacattgagtct
aaaaatggaattaaaatgaaatcattgtctaatgcttcagagattttggatatgacagga
actgcaggaagaaaattggaaattttgagggctgttacagaaataccgacccaatttaga
agtatttttaaggagttcccatattttaactatgcacagtctaaagctttggatgatctt
ctttatacggataggaactttgtgatttgtgctccaactggctctggaaaaacagtaatg
tttgagctagctattaccagattactcatggaagccccactgccttggttaaatattaaa
gttgtttacatggctccaataaaagctctatgcagtcagcgttttgatgattggaaagaa
aaatttggacctataggactcagctgcaaggaacttacaggagatacagtgatggatgat
ttgtttgaaatacatcacgctcacattattatcactacacctgaaaaatgggatagcatg
actagaaggtggagagacaactctgtagtccagcttgtacgactgtttctcattgatgag
gtgcatgttataaaggatgaaagccgtggcgcaacattagaagttgtagtcagtcggatg
aagactgttcagtcttctctttcacgtcttttagagaatcatgacactgttcctcccatg
agatttgtagctgtttctgcaacaattccaaatgctgaagatattgcagaatggctttca
gatagtaagatgcctgctgtgtgtctgaaaatagatgaggatcaacgacccgtgaagcta
cgcaaaattgttctgggttttccttgcagtgacaatcagacagaattcagatttgactta
actcttaactacaagatagctagtattatacaaacatactcagaacaaaaaccagcactt
gtgttttgtgccacaagaaaaggagtacagcaggctgcttctgttcttgcaaaagatgct
aaatttctgctgagtgtagaacagaaacaaagattacagaggtctgcaaattcattgaaa
gattccaaactgagagatcttctaatatatggtgtggcttatcatcatgcgggtatggag
atatctgacagaaaaataattgaaggagcttttactgtaggagacttaccagtccttttt
actactagcaccttagctatgggagtcaatctacctgcacatctggtggttataaaatcc
acaatgcactatgttggaggagtgtttcaggagtacagtgaaactgatattctgcaaatg
attgggagagcaggaaggcctcagtttgacactacagctacagcggttattatgactcgt
tggagtacaagggagaagtatatacagatgttaaatggtgctgatataatagagagcagc
ttgcacaggcatcttgtcgagcacttaaatgcagagatagtgctacatactgtcacagat
gtcactgtagctttggaatggatacgatcaacattcttgtacattagagccttaaaaaat
ccaactcattatggtttttcatctggattggataaaattggaattgaagcaaaattacaa
gagctgtgtttgaagaacttaaatgatctatcagcttttgatttgattaggatggatgaa
gcaaataatttcaaaccaacagagactggaatattaatggcatggtattacattgcgttt
gatacagtgaaacaatttttcacaattaagggaacagagactttaaatgaattgattaaa
atgatttccaactgcacagaatttctggatgtcaagttaagaacaaatgaaaagaaaata
ctgaacagtctgaataaagacaaggacaaaataactatcaggtttccaatggaggggaag
ataaaaacaagagaaatgaaaataaactgtcttattcaggctcagctaggatgcattcct
attcaagactttactttgacacaagatactggcagaatatttagaaatggcttaagagtt
actagatggttatctgactttctggcatcatgtaagaacaacttttctgctttattaaac
tctttgattttagcaaagtgtttccggtgcaaactttgggaaaattcacttcatgtgtct
aaacaattggaaaagattggtgtatcactgtcaaatgctatggtaaatgctgggctgaca
tcatttaaaaaaatagaagacacaaatgcaagggaacttgaattgattttaaacagacat
cctccttttggaaaccagataaaagaatctgttttgcaccttccaaaatatgaacttgac
attgaacagcttccaaaatacagtgatacatcggctgagatcttagtaaccatcaaatta
aaaaactatgagcagctacagacaaagagaacagcaacagactttcactatgttacattg
gtcataggagatgctgacaaccaagtcatttttaatcagaaaattatggattctgtgctg
ctaaaaactggaaattggacgaagaaaactgaagtgaaaagagctcttaaatcagaggaa
attagtataaatttaattagttctgattatggaggcagatctaaacaagagattacttac
aagaaatacggaaacagagaatgcaaccatcgctgtaaaaataaagatgtgtgtggacat
gactgctgtaaaactggagtacttccaatatctgagatgaatggagattcaaagttttct
ttgtacctagctgatctaaggagcaggaactcagtttcatctgtacctccagtaaaacgg
ttaaagatgcagatgttaaatcaaactcaaaatatggatctcaaacaatttgtttttaca
cctaagtcttcgttgccagcattgccaaggtctagtgataaacagttgtcttcatcacct
tcagcggaccaggtagataatgttaatagcttaggaatattccagaaacaaccgcaatcc
tggaattatggaaagagtaatgctttggatgtggactttgaactgagagatgatgtttgg
gatgatattgatgatgagaaattagtatttgctagcaactttgccagtagagaattagat
gagtgtgagccactttgccagtctacaagaagcaaagccacaaatgacatttcaaaagat
gcatgcacagtacaagatgagaccaatattcagaactcagatgtttctgtggttagtagc
acaccaaaagtgaatttttctgtacagagtggaaatataaatatgttcagttttcaagaa
aaaaagcattcaaatccttcacaagagctgaagagtgtacaatgttctccaatctcaaaa
atgatctcagactcttctaaattcactaggaaagaggatttttttattttcacgaaagaa
caggataaagtagatcccagatatcttcttgatgatgaaatcagtgatgtcaagcccttg
cttggaatatttgatgacattttgtaa
DBGET
integrated database retrieval system
