Opisthocomus hoazin (hoatzin): 104336219 Help Entry 104336219         CDS       T08436                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism oha  Opisthocomus hoazin (hoatzin) Brite KEGG Orthology (KO) [BR:oha00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:oha03009]     104336219 (PDCD11) Ribosome biogenesis [BR:oha03009]  Eukaryotic type   90S particles    Other 90S particles     104336219 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 HAT_Syf1_CNRKL1_N Spt6_S1 OB_RRP5_4th HAT_PRP39_N Suf HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_14 OB_RRP5 TPR_19 TPR_15 TPR_16 TPR_CcmH_CycH ARM_TT21 ARM_TT21_5th TPR_12 Motif Other DBs NCBI-GeneID:  104336219 NCBI-ProteinID:  XP_009940336 LinkDB All DBs Position Unknown AA seq 1837 aa AA seqDB search MASVEENFPRGGIQKKPTEGKTPNLKLERDNLFDVHHEEQSRKRKRSQRDQGKQKRFKAD KIAAAKNSVVNIEPLTVEMLCEGMLLLGCIKEVSDYELVISLPNGLTGFVPVTQISDAYS KLLSKQVDQGELLEDVNSLSDMYSPGTLVRCVVTSVEKSADGRRSIKLSIDPRKVNKGLN ASALAPGMLLSGFVSSVEDHGYLIDIGVSGSHAFLSRQKAQNYIKAVKRGSDLKIGQNLN CVIVEVKNDGRVVHLSIDRSEVAASLATEQQNWTLSNLLPGLVVKARVQKVAPLGIKVSF LSSFTGIVDFMHMDSEKSVNYSPDQAVKACILSVHPTSKVVRLTLRQAFLHPGGSPNQLS TDRMGAVVEESTVKAFYKQFGAVFELDDGMLAFARLKHLSKTRKSFKPGAFKAGCKHKCR IIDYSLMDEMCVVSLKYQIIEARFLQYQDIHTGDVVQGKVFSLKPIGMQVKVTDGIKGLV PSMHLAEVILKQPEKKYNTGDEVKCRVLECNPAGKKLILTLKKSLVQSKLPVLSNYEDAK PGLITHGFVVCVREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFHEGQVVKVVVLKCE PQQERLLLSFKLSSKSASEDKKECTPKKNQDVKYQIGEVVDVKVLKKKDHGLEVSVLEDE GNVIAWIPTVHFSDFVTNCKLLWHCLQEGDVLPRVMCLSDKGERIILSRKSAVISAVQEE QVVRSFSEIQCGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQ TVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKEMKEIRNLWRRRGESST ARDLCKLVPGKELQLVVQEVKEDGSALFSGSCVTGLTLTATRYHLGDKSVVPGEKTKALV LHVDALTSKVYVSLREELLKRRTKQRLTENSQHSAIVQHIAEEFAIVSLETGQLAAIPIA SHFNDTFRFDSEKLKVGQTIFATLKVVKVNDHGVLLAVQGPAKKNAFVRVRNESETALEE MLAPVKHSLSLGDIVTGTVKSVKPSHVTVAIDEKLTGSIHASRILDEVPIGSFPTYTLKA GQKVTARVIGGRDVNTHRYLPITHPHFTRTIPELSIRPSEIEGKVTAMLNLKEDGALKKL GLYSVGQTVTCFVKKYNILKNWLEVEVDPDIRGRVPHLLLSLNTKVLKHPEKSFKNGQAI SATVTRSDVTETNLCLSLTGIQSLEQGTITVGMVTKVTPHIGLIVTLPGGKTGKVSIFHL SDTYTENPLGDFKVGKIVRCYILSNKNGKIHLSLRQSRLNPKNNRKVEDVEITCIKDVKK GQLVRGYVKSVTPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLG VNGKEKHIELSFLPEDTGMPSVLPESLGLPRYDAEEEKREEDDREKREELKLKTKRRKGN SESEQEAKPKKRKICPTDENDSGIEVYYREEEDDDQEEEASKKKSKIRKPGEAPRLQVSM GFTWDEDMNAVEIPVLNQKEDSSESEEEDDPQSKLKKQTKKEKELEKQKKEKELCKLEAA LMDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREE QEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEELY HTMLKRFRQEKSVWLKYASFLLKQGQAEATHRLLERALKALPTKEHVDVISRFAQLEFRF GDPEHAKALFESTLGSYPKRTDIWSIYMDIMIKQGSQKEVRDIFERVIHLSLAPKKMKFF FKRYLDYEKKFGTTESVLAVKRAALEYVETKSSRADT NT seq 5514 nt NT seq  +upstreamnt  +downstreamnt atggcatccgtggaagaaaactttcctcgagggggcatccagaaaaaacccacagaggga aaaactcccaacttgaagttagagcgggacaatttgtttgatgttcaccatgaagaacaa tcccggaaaagaaaaaggagccaaagggatcaaggaaagcagaaaaggttcaaggcagac aaaatagccgctgctaaaaacagcgttgtgaatattgaaccactcacagttgagatgctc tgtgagggaatgctgctccttggttgtataaaagaggtcagtgactacgagctagtcatc agcttgcccaatggactcacaggatttgtgccggtcacgcagatcagcgatgcctacagc aaattgctgagcaagcaggtggaccaaggagaactcctggaggacgtgaattcgctctcg gacatgtattctccagggacactggtcaggtgcgttgtgaccagtgttgagaaaagtgct gatggacgtcggagtatcaaattatcaatcgaccccaggaaggtcaataagggtctgaac gcttcagcgctagcaccgggcatgctgctctctggctttgtgtctagtgtggaagaccat ggctacctgattgatatcggagtcagtgggtctcatgctttcctgtctcgtcagaaagcc caaaattacatcaaagcagtgaagagaggatctgacttgaaaataggccagaacctgaac tgtgtcattgtggaagtaaagaatgatggaagagtggtccatttgtccattgatcgatca gaggttgctgcatcccttgcaacagagcaacagaactggacactctctaatttattgcct gggttggtggtgaaagctcgagtgcagaaggtcgccccactggggatcaaagtgagcttt ctgtcttccttcactggcattgtggatttcatgcacatggactcagagaaatctgtgaac tattctccagatcaagcggtgaaagcttgcattctctctgtccacccaacctccaaagtg gtgcggcttactctgcggcaggccttcctccatcctgggggatccccaaaccagctctcc actgatcgcatgggggcagtggtggaagagtcgacagtgaaagctttctacaagcagttt ggtgccgtctttgagcttgatgatggcatgcttgcgtttgcacggctgaaacatctttca aaaaccagaaaatcctttaaacctggggcatttaaggcaggatgcaaacataaatgtcgg atcattgactacagcctgatggatgagatgtgtgttgtatctctgaaataccagattatt gaagcgcggtttctgcaataccaagatatccacacaggggatgtggtgcagggcaaagtg ttttcattgaaaccgattgggatgcaggtgaaggtgactgatgggattaaagggcttgtg ccatccatgcatctcgctgaggtgatcctgaagcagcctgagaagaagtacaacacagga gatgaagtcaagtgtcgggtgctagagtgcaatcctgcaggaaagaagttgatccttact ctaaagaaaagtcttgtccaatcaaagcttccagtcctctccaattatgaagatgcaaaa ccaggtctgatcacacacggcttcgtggtgtgtgtgagggagtttggctgcattgtgaaa ttctacaatgatgtcaaaggtctggtacccaagaatgagctgagctcagaacccatatct tgtccagataaagtcttccatgaaggccaggttgttaaagtagtggtcttaaaatgtgag ccccagcaggaaagactcttgttgtccttcaagttatcaagcaagtctgcttcggaggac aaaaaggaatgtactccgaagaagaatcaggacgtgaaatatcaaatcggagaggtggtt gatgtgaaagtcttgaagaagaaagatcacgggctagaggtttctgtcttagaagatgaa ggcaacgtgatagcctggattcccacagtgcacttctctgactttgttactaactgcaag ctcttgtggcattgtcttcaagagggagatgtcctgcccagagttatgtgcctaagtgac aagggagagcgtatcatcttgagcagaaagtctgcagtgatttctgctgtacaggaggag caagttgtgagaagtttctctgaaatccagtgcgggatgctgttgactggttacgtgagg aatgtgatgccctttggagtgtttgtggaattcccttttggtgtgacaggactggcgccc aaagtgagcatgagtgacaaatttgtgacggacaccaaggaccactttgtggtgggacag actgtgattgcaaaggtgatgagcattgatgaggagaagcagcgcgtgctcctcaatctg aaggtgtcagagtgcagctcaggcgattctgctgcagagagctttgccctgctaaatcag tatttcaaggagatgaaagaaatcagaaacttgtggagaagaagaggggagtccagcacg gcccgagacctttgcaaattggtgcctgggaaggagctgcagctggtcgtgcaggaggtg aaggaggatggctcagcactgttcagtggcagctgtgtcacaggcttgacactgacggcc actcgctaccatttgggagacaaaagtgttgttcctggtgagaagaccaaggcattggtt cttcatgtggatgccctcacatccaaggtgtacgtttctcttcgggaagagctgttaaaa cgaagaaccaagcaacgactcacagagaactcccagcactctgccatcgtgcagcacata gcagaagagtttgccatcgtgtctttggaaacaggccagctggcagctatccccatagcc tctcacttcaatgacaccttccgttttgactcagaaaaactgaaggtgggacaaacaatc tttgcaaccttaaaagtagtgaaggtgaatgaccatggagtcttattagcagtacaaggc ccagcgaagaagaatgcttttgtaagggtccggaatgaatctgagacagcattagaagag atgcttgctcctgtgaaacactcactttccctgggagatattgttactggtactgttaaa tccgtcaaaccaagccacgtcacagttgctattgacgagaagctgacaggttcaatccat gcatcccggattctggatgaagttcccataggctcttttccaacgtatactctgaaagct ggacagaaggtgactgctcgagtcattggaggcagagatgtgaatactcacaggtacctg cccatcacccatccgcacttcacacggactatcccagagctcagcattcgaccaagcgaa atagaagggaaggtcacagcaatgctgaaccttaaagaagatggtgccctcaagaaactt ggactttacagtgttggacagacagtcacctgttttgtgaaaaagtataacatcctcaaa aattggctggaggtagaagttgaccctgacattcgaggaagagttcctcatctgctgctg tctctgaacaccaaggtcttaaaacatccagaaaagagcttcaaaaatggccaggcaata tcagctacagtgactagatcagatgtcaccgaaacaaacctctgcttgtcactcacagga attcagtcactggagcagggcaccatcactgtaggcatggtaacaaaggtgactccacac atcggtttgatcgttacgctgccaggtgggaagactggcaaagtcagcatctttcacctg agtgatacttacacggagaatcctctgggtgacttcaaagttggcaagattgtcaggtgt tacatactctccaataagaacggcaaaatccacttatccctccggcaatcccggctaaac ccaaagaacaacaggaaagtggaggatgtcgaaataacatgtattaaggatgttaaaaaa ggccagctagtgagaggctatgtcaaatcagtcactccatcaggtgtattttttggcttg tccacttctcttctgggccgaatcctgttccagaatgtttccccttactttgtacagaaa cactccttatatgaaaagtacctgccagaaggaaagctgctcactgccaaggtgcttggt gtaaatggaaaagaaaaacatattgagctctctttcctgcctgaggacacggggatgcca agcgtcttgcctgaatccctaggcctaccacgatatgatgcagaggaagagaagagagag gaagatgacagggaaaagagagaagagcttaagctgaagacgaaacggagaaaaggaaac tctgaaagtgagcaggaggcaaagccaaagaagaggaagatctgcccaacagatgaaaat gacagtggaattgaggtgtactaccgggaggaggaggatgatgaccaggaggaggaggcc tctaagaagaagtctaagataaggaaacctggtgaagctcccaggctgcaggtttccatg ggcttcacctgggatgaggacatgaatgcagtggagatacctgtgctgaatcagaaggaa gatagctcagagagtgaagaggaggatgatccgcagtcgaagctgaagaaacaaacaaag aaagagaaggagctagagaagcagaagaaggagaaggagctctgcaaattagaggcagct cttatggaccccagtcgacagccccagtcagcagatgactttgaccgcctggtgctgagc agtcccaacagctccatcctctggctacagtacatggctttccacctccaggctaccgaa attgagaaggccagagctgtggcagagagagcgcttaaaacaatctgcttcagggaagaa caggagaagctgaatgtctgggtagctctgctgaacttggagaacatgtatggtactgag gagacactgatgaaggtctttgagagagctgttcaatacaatgaacctctgaaagtcttc cagcatctatgtgacatctatgccaattcggagaagtacaagcaagcagaagaattgtac cacacaatgctgaagcgtttccgtcaggagaaatccgtgtggctgaaatacgcctctttc ctcctgaagcaaggccaggctgaggctacacacaggcttttggagcgtgctctcaaggct ttgcccaccaaagaacatgtggatgtcatttcaaggtttgcacagctggagttccgtttt ggggacccagaacatgccaaggccctctttgagagcaccctcggcagctatcccaagcgg acagatatctggtccatctatatggacatcatgatcaaacagggcagccagaaggaagta cgggacatctttgagagggtcatacacctgagcctggcaccaaagaagatgaaattcttc tttaaacgctacctggattatgagaagaaatttggtaccacagaaagtgtcctggctgtt aaaagagcagcacttgagtatgtggagaccaagagttcccgtgctgacacctaa

DBGET integrated database retrieval system