Opisthocomus hoazin (hoatzin): 104336269
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Entry
104336269 CDS
T08436
Symbol
COL17A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104336269 (COL17A1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DUF5006
DUF4869
Motif
Other DBs
NCBI-GeneID:
104336269
NCBI-ProteinID:
XP_009940395
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All DBs
Position
Unknown
AA seq
1500 aa
AA seq
DB search
MDSVTKKTRQDGSEVTERQGGSSSGLKTSSHTGGSGVEKRSYTHGSSYVTSSGSGRLNSS
SSCSSYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPEFPRREFASASTRG
RSQSRESEIRVRLQSASPSGRWTELDEVKRLLKGSRSASCSPTRSPSSTLPIPKKAVVET
KMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSSSLINAMSHSTGSVFG
VPNNLAPSNHTLNAGLSTSSTVFGVQNNLSPSSPTLTQNATAASAAYGMKNTSQSNTMAS
TGVSASAGGTILSSQGDDILHKDCKFLLLEKENAPPKEEMELLIMTKDSGKVFSASTTGL
NGGSFVEDTLKKEKQGFSSSYAADTGLKSDANGGLKSVPTRDKATYAEIRNGDVGGAIGS
APSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALADEVRKLKSRVENLEKINGGLLT
INQGNSKIEKDVSRVDFLHGISPSSTFAYENEESVWLMVKNRLNKEIERGYFRGERGEPG
EKGDMGMQGPRGERGLPGIPGIHGPIGQHQGPEGPKGQKGSMGDPGTEGPMGQRGREGLP
GLRGEPGPPGFGEKGDRGAVGEPGPPGPPGPPGSAGLKGLMGSPGPQGPPGPPGLQGFRG
EAGLPGAKGEKGAAGAPGPKGDQGEKGSRGMTGEQGSRGMPGPPGEPGAKGPVGQAGRDG
QPGEKGEPGLMGMPGARGPPGPSGDAGQPGLTGPQGPPGLPGNPGRPGAKGEPGAPGKVI
SAEGSSTIALPGPPGPPGPAGPTGPPGVPGPVGPAGLPGQQGPRGEKGSPGEAVIETIKT
EVSSLTSQMLADLQGRAGPPGPPGPPGESIQGPPGPRGPPGLPGPPGPPGRPGSSMSTSE
SFFTGPPGPPGPPGPKGDQGERGPRGFTGEPGEPGLSAFSSHGERVTIQGPPGVPGPPGP
PGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYVADYLKSD
NVRHYLMGAQGPPGPPGPPGVITTADGSNLDYAELATRVMSYMTSSSDRYQSFASSVSTT
SVLYQELLDMLQREEVRQYLIGPQGPPGPPGPGGDGMSLSLDYDDLTRRFISYLTNSGMS
IGLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSSGTSLEDVSA
YLQSVGYSSLSGIQGPPGPPGPPGPPGFSGTGLLSYADITHSDEFRSELIQYLKSDEVRS
YISGPPGPPGPRGPPGPKGDSGLVAGSMSSSYQGLRASEHGGSLGAEGAHGGSLGTGSSY
GSAMSSVSSYSASVGSDGSYGAAMGSDGAFDGLLTEEESHRRSAGSGRSYSSSFTGPLDY
NELALRVSESLQSRGILQDLMSYTAQGPAGPPGPPGPPGISRVFAAYGNVTEDLMDFFRT
HGTIQGPPGEKGERGYPGPKGDPGPMGPPGRHGQRGPKGEKGEKGEQVYVGRRKRRSVGV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacaaagaaaacgaggcaagatggatcagaagttactgaaagacaagga
gggagcagcagtgggctcaaaacatcatcccacactggagggagtggagtggaaaagagg
tcttacacccatggcagcagctatgtgacttcaagtggaagcggtagactgaattcatca
tcatcgtgctccagctacaggcaaacccagtctcccagctctactcttaccaaatcacct
ggctcaaccttcgaaagaaaaacctatgtcaaccgccatgcaacatatgaagggagctcc
agtgccaactcttctcctgagtttcccagaagagagtttgcatctgcctccacaagaggg
cgaagccaaagtcgagagagtgaaatacgagtccgactgcagagcgcgtctccctctggc
agatggacagagttggacgaggtgaaacgtttgctgaaaggaagtcgatcagccagctgc
agccctactcgatcaccgtcaagtacgctcccgataccgaaaaaggctgtggtggagaca
aagatggttactgaaagctctcagtcagtgtcaggtacatatgatacaaccatactgaat
accgccctcccttcatacatgtggtcctccactctgcctgctgggtcttcccttggtgga
taccataacagctcttccttgatcaatgctatgtctcactctacaggatcagtttttggt
gttccaaataacctggctcccagcaatcatactctgaatgcaggactgagtacttcctct
acagtatttggagttcaaaacaacctgtctccaagctctccaaccctgacccagaatgct
actgcagcctccgcagcatatgggatgaagaacacttctcagagcaacaccatggcaagt
actggtgtgtctgcctcagcggggggaaccattttgagctcccagggagatgacattctg
cacaaagactgcaaattcctgctgctggagaaggagaatgccccaccaaaggaggagatg
gagctcttgatcatgacaaaggacagtggcaaagtctttagtgcttctaccactgggcta
aatggaggatcctttgtagaagacaccttgaagaaagagaagcagggattttcctcctct
tacgctgcagatactggcctaaaatcagatgcaaatggaggactgaaatccgtgccaaca
agggacaaagcaacttacgcagaaatacgaaatggagatgtggggggtgcaatcggatca
gcaccatcctggtgtccctgtgggtcctgctgtagctggtggaaatggctcctgggtttg
cttctggcctggttgcttctgcttggattgctttttggactcattgctctggcggacgaa
gtgagaaagctgaaatctcgtgtggaaaacctggaaaaaatcaatggtggcctcctgaca
attaaccaagggaattcaaaaatagaaaaagatgtttcaagagtagactttcttcatggt
atttcaccttcctcaaccttcgcttacgaaaatgaagagtcagtttggttgatggtgaag
aacagactgaacaaggaaatagaacgaggctacttccgaggggagagaggagaacctggt
gagaaaggtgacatgggaatgcaaggtcccagaggagagcgaggacttcctggtatccca
ggcattcatggtccaattgggcagcaccaaggaccagaaggacccaaaggacagaaaggc
agcatgggtgatcctggcacggaaggtcccatgggacaaagaggtcgagaagggctacca
gggcttcgaggggagcctggaccacctggatttggagaaaaaggagatagaggtgctgtt
ggtgagccaggtcctccagggccacctggtcccccaggttctgctggcctgaaaggtctg
atgggttctccaggcccacaaggtcctccaggtcctcctggcctacaaggatttagagga
gaagcaggtctcccaggtgctaaaggtgagaaaggagctgctggagcccctggacccaaa
ggtgatcagggtgagaagggttctcgtggaatgacaggtgaacaaggctcaagaggaatg
cctggtcctccaggagagccaggggctaaaggacctgtaggacaagctggccgtgatgga
cagccgggtgaaaaaggtgaaccaggtcttatgggaatgccaggggcccgaggccctcca
ggaccctctggagatgcaggacagccaggtctcacaggaccccaaggaccaccaggactt
ccaggcaacccaggccgaccaggggctaaaggagaacctggagctccaggaaaagttata
agtgctgagggttcgtcaacaattgctctgccaggcccaccaggtcccccaggcccagct
ggccccactggacccccaggtgttccaggtcctgttggaccagctggtctccctggacag
caaggtccacggggtgagaagggatccccaggagaagctgtgatagaaactatcaaaaca
gaagtctcatcattaacatctcaaatgctggcagatttacaagggcgagcaggaccacca
ggtccccctggaccaccaggtgaatctatacagggaccccctggacctcgtggcccccca
ggattgccaggacctccaggcccaccagggagaccaggatcttccatgtccacctcagaa
tcgttcttcacaggcccaccaggtccaccaggcccaccaggcccaaagggagaccaaggc
gaacgaggtccacgaggattcacaggagaaccgggtgaacctggcctttcagcattctcc
tcccatggtgaaagagtcaccatacagggacctccaggagttccaggcccgccaggccca
cctggacccaaaggtgatgcaggtgtcccaggcgctcctggcatcccaggagcatctcga
ggtggatccagacaaattcagggacccccgggacctcctgggccgcctggtcctcctggc
ccaggtggaagttcatctcaagagattcagcagtatgtcgctgactacctgaaaagtgac
aacgtaaggcattatttgatgggtgcccaaggcccaccaggccctccaggcccacctgga
gtcatcaccactgcagatgggtcaaacttggattatgcggagctggctacccgtgttatg
agctatatgacaagctcttcagatcgctatcagtcatttgccagttcggtatcaactaca
tctgttttgtaccaagaacttctggacatgctgcagagagaagaagttcgtcagtatctg
attggacctcagggcccaccaggacctcctggaccagggggagatggcatgtctctgtca
ctggattatgatgatctgaccagacggtttatcagctacttgacaaattctgggatgagc
attggcctccctggaccacctgggcctccagggacacctggtatatcttacagtgacctg
acagcatacctgcgaaactctgaattcagtggtcttgtcgggccccctggtcctgcaggg
cccccaggacctccagggatccctggatcatctggcacctctctggaggacgtctctgct
tatctacaaagtgtgggatactcctccctctccggaatccagggcccacctggccctcct
ggccctccaggaccacctggcttctcaggaaccggcctcctgtcctatgctgacatcacc
cacagtgacgagttcaggagcgagctgatccagtacctgaaaagtgatgaagttcgaagc
tacatctcagggccgcctgggccccctgggccacggggaccaccaggacccaaaggagat
agtggcttggtggctgggtctatgtcttcatcataccaagggttacgggcttctgagcat
ggaggatcccttggtgctgagggagcccacggggggtcactgggcacaggcagctcctat
ggcagcgccatgagcagcgtgtcgtcttacagtgcctctgtgggcagcgatggctcttat
ggtgccgccatgggcagtgatggggctttcgacgggctgctgacagaggaggaatcacac
aggagatcagcaggttcaggcagatcctacagcagctccttcactggtcccctggattac
aacgagctggcactccgcgtgtcagagagcctacagagccgaggtattctccaggacctg
atgtcttacactgcacagggacctgcaggtcccccaggccctcccggtcctcctggcatc
agcagggtctttgcagcctatgggaatgtcactgaggacctcatggacttctttagaaca
catggaaccatccaggggccgcccggtgaaaagggggagaggggttatcccggacccaaa
ggtgaccccggaccgatgggcccaccaggacgccacgggcagaggggaccaaaaggagag
aaaggagagaaaggtgaacaagtgtatgttggcagaagaaaaagacggagtgttggggtt
taa
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