Opisthocomus hoazin (hoatzin): 104336304
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Entry
104336304 CDS
T08436
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha04145
Phagosome
oha04148
Efferocytosis
oha04510
Focal adhesion
oha04512
ECM-receptor interaction
oha04810
Regulation of actin cytoskeleton
oha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104336304 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104336304 (ITGB5)
04148 Efferocytosis
104336304 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
104336304 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104336304 (ITGB5)
04810 Regulation of actin cytoskeleton
104336304 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oha04131
]
104336304 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oha04515
]
104336304 (ITGB5)
Membrane trafficking [BR:
oha04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
104336304 (ITGB5)
Cell adhesion molecules [BR:
oha04515
]
Integrins
Integrin beta subunits
104336304 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
Integrin_b_cyt
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
WD40_Apc4_C_fungal
Motif
Other DBs
NCBI-GeneID:
104336304
NCBI-ProteinID:
XP_009940431
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MDLSLSMNDDLDNIRNLGTKLAEEMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCI
GYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKI
GWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLG
EKLAENNIHLIFAVTKSHYVLYKNFTALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVE
LTVWDSPEEIGLTFTATCQDGLSYPGLRKCGDLKIGDTAAPASGKCSGNGTYACGLCSCD
AGYLGARCECEEGASADMHHAMCREAEGKPLCSGRGECSCNQCLCHESEFGNIYGPFCEC
DDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCSTKTDSCVSSDGQMCSGRGTCVC
GKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFNSGRLADNQTCQKHCKDEIITTV
DVLETDDPNAILCAYPVNNCVMKFTYSELASGKSNLTVLKEPACSSAPSAVTIVLAVIGS
VVLIGIILLGLWKLLVTIHDRREFDRFQSERSRARYEMASNPLYRKPISTHNVEFTFNKL
NKSYNGTVD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccctgtccatgaacgacgacctagataatattcgcaatctggggaccaag
ctggctgaagagatgcgaaagctcactagcaatttccggctggggtttggctctttcgtg
gacaaaaacatttctcctttctcctacacggcaccaagataccaaaacaatccctgcatt
ggttacaagctgttccccagctgcgtcccatcctttggcttccgccacctcttgtcccta
acggataaagtcgaccgtttcaatgaagaagttcagaaacagaaggtttcccgcaaccga
gatgctccggagggcggtttcgatgcgattttgcaggctgccgtgtgcaaggagaagatt
ggctggcgtaaggaggcgtctcacctgctggtcttcacaacggatgatgtgcctcacata
gccctggatgggaagctgggggggctggtgcagccccatgacggccagtgccacctgaat
gaagccaacgagtacagcgcgtccagccagctggattatccttccctggcgcttcttggg
gagaaactcgccgaaaacaacatccacctgattttcgctgtcacgaaaagtcattatgtc
ctgtacaagaactttactgccttgattcctgggacaacagtggagattttgcacaaagac
tccaagaatatcatcgagctgatcgtcaaggcctataacagtattcggtccaaagtggaa
ctcacagtctgggacagccctgaggagatcggtttgaccttcactgccacatgccaggac
gggttgtcctatcctgggctcaggaagtgcggggatctcaaaataggagatacggccgcg
ccggccagcggcaagtgcagtggcaacgggacctatgcctgcgggctgtgctcctgcgat
gccgggtacctgggggccaggtgcgagtgcgaggagggtgccagtgcagacatgcaccac
gccatgtgccgggaggccgagggcaaacccctctgcagcgggagaggggagtgcagctgc
aaccagtgcctctgccacgagagcgagtttggaaacatctacgggcctttctgcgagtgc
gacgacttctcatgcgccaggtacaagggagtcctgtgctcaggccacggagagtgtcac
tgtggggagtgcaagtgccatgccggttacatcggggacaactgcaactgctccaccaag
acggacagctgtgtttccagcgacgggcagatgtgcagcggcaggggcacctgcgtctgt
gggaagtgtcagtgcaccgagccgggggcttttggagagacgtgtgagaagtgtcccacc
tgcccaggcgtctgtagcactaaaagggactgcattgaatgcaagctgtttaactcagga
agactggctgataaccaaacctgccaaaagcactgcaaggacgagatcatcaccactgtg
gatgttctcgaaacggatgacccaaacgcgatcctctgcgcctacccagtgaacaactgc
gtcatgaagttcacctactcggagcttgccagtgggaaatccaacctcaccgtcctcaaa
gagccagcatgcagctcagcacccagtgctgtgaccatcgtgctggcggtgatcggcagc
gtggtgctgattggcatcatcctgctgggactctggaagctgcttgtcaccattcatgac
agaagggagttcgaccgattccagagcgaacgctcccgggccagatacgaaatggcatcc
aatcctctctaccgaaagcctatttccacacataacgtagagttcacgttcaacaagctc
aacaagtcttacaatggtacagttgactga
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