KEGG   Opisthocomus hoazin (hoatzin): 104336304
Entry
104336304         CDS       T08436                                 
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha04145  Phagosome
oha04148  Efferocytosis
oha04510  Focal adhesion
oha04512  ECM-receptor interaction
oha04810  Regulation of actin cytoskeleton
oha04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oha00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104336304 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104336304 (ITGB5)
   04148 Efferocytosis
    104336304 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104336304 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104336304 (ITGB5)
   04810 Regulation of actin cytoskeleton
    104336304 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oha04131]
    104336304 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oha04515]
    104336304 (ITGB5)
Membrane trafficking [BR:oha04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    104336304 (ITGB5)
Cell adhesion molecules [BR:oha04515]
 Integrins
  Integrin beta subunits
   104336304 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail EGF_integrin Integrin_b_cyt EGF_2 I-EGF_1 EGF_Teneurin EGF_TEN vWA_SIBA-E WD40_Apc4_C_fungal
Other DBs
NCBI-GeneID: 104336304
NCBI-ProteinID: XP_009940431
LinkDB
Position
Unknown
AA seq 609 aa
MDLSLSMNDDLDNIRNLGTKLAEEMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCI
GYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKI
GWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLG
EKLAENNIHLIFAVTKSHYVLYKNFTALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVE
LTVWDSPEEIGLTFTATCQDGLSYPGLRKCGDLKIGDTAAPASGKCSGNGTYACGLCSCD
AGYLGARCECEEGASADMHHAMCREAEGKPLCSGRGECSCNQCLCHESEFGNIYGPFCEC
DDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCSTKTDSCVSSDGQMCSGRGTCVC
GKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECKLFNSGRLADNQTCQKHCKDEIITTV
DVLETDDPNAILCAYPVNNCVMKFTYSELASGKSNLTVLKEPACSSAPSAVTIVLAVIGS
VVLIGIILLGLWKLLVTIHDRREFDRFQSERSRARYEMASNPLYRKPISTHNVEFTFNKL
NKSYNGTVD
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggatctctccctgtccatgaacgacgacctagataatattcgcaatctggggaccaag
ctggctgaagagatgcgaaagctcactagcaatttccggctggggtttggctctttcgtg
gacaaaaacatttctcctttctcctacacggcaccaagataccaaaacaatccctgcatt
ggttacaagctgttccccagctgcgtcccatcctttggcttccgccacctcttgtcccta
acggataaagtcgaccgtttcaatgaagaagttcagaaacagaaggtttcccgcaaccga
gatgctccggagggcggtttcgatgcgattttgcaggctgccgtgtgcaaggagaagatt
ggctggcgtaaggaggcgtctcacctgctggtcttcacaacggatgatgtgcctcacata
gccctggatgggaagctgggggggctggtgcagccccatgacggccagtgccacctgaat
gaagccaacgagtacagcgcgtccagccagctggattatccttccctggcgcttcttggg
gagaaactcgccgaaaacaacatccacctgattttcgctgtcacgaaaagtcattatgtc
ctgtacaagaactttactgccttgattcctgggacaacagtggagattttgcacaaagac
tccaagaatatcatcgagctgatcgtcaaggcctataacagtattcggtccaaagtggaa
ctcacagtctgggacagccctgaggagatcggtttgaccttcactgccacatgccaggac
gggttgtcctatcctgggctcaggaagtgcggggatctcaaaataggagatacggccgcg
ccggccagcggcaagtgcagtggcaacgggacctatgcctgcgggctgtgctcctgcgat
gccgggtacctgggggccaggtgcgagtgcgaggagggtgccagtgcagacatgcaccac
gccatgtgccgggaggccgagggcaaacccctctgcagcgggagaggggagtgcagctgc
aaccagtgcctctgccacgagagcgagtttggaaacatctacgggcctttctgcgagtgc
gacgacttctcatgcgccaggtacaagggagtcctgtgctcaggccacggagagtgtcac
tgtggggagtgcaagtgccatgccggttacatcggggacaactgcaactgctccaccaag
acggacagctgtgtttccagcgacgggcagatgtgcagcggcaggggcacctgcgtctgt
gggaagtgtcagtgcaccgagccgggggcttttggagagacgtgtgagaagtgtcccacc
tgcccaggcgtctgtagcactaaaagggactgcattgaatgcaagctgtttaactcagga
agactggctgataaccaaacctgccaaaagcactgcaaggacgagatcatcaccactgtg
gatgttctcgaaacggatgacccaaacgcgatcctctgcgcctacccagtgaacaactgc
gtcatgaagttcacctactcggagcttgccagtgggaaatccaacctcaccgtcctcaaa
gagccagcatgcagctcagcacccagtgctgtgaccatcgtgctggcggtgatcggcagc
gtggtgctgattggcatcatcctgctgggactctggaagctgcttgtcaccattcatgac
agaagggagttcgaccgattccagagcgaacgctcccgggccagatacgaaatggcatcc
aatcctctctaccgaaagcctatttccacacataacgtagagttcacgttcaacaagctc
aacaagtcttacaatggtacagttgactga

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