Opisthocomus hoazin (hoatzin): 104336367
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Entry
104336367 CDS
T08436
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104336367 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104336367 (CLP1)
Enzymes [BR:
oha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
104336367 (CLP1)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104336367 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
Motif
Other DBs
NCBI-GeneID:
104336367
NCBI-ProteinID:
XP_009940499
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MGLSHLLLGVDVAMGFAVGMAVGAALVIAVGTTCVPTTIPGWTHGRLADFALCPQAPVVG
RLELSGGLSLVVVVPWGPLGALGTLERALDPLAFLGLLWRAARTPPQATALALPRMRLDL
ALDGGAPGIPAGVALRTGAADYGLFLDAELCGLAQGPAVAVDAAWHRAITSRLADVFNQR
CEVNRRASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFV
RTVLLPKSGGVVERSKDFRRECRDDRIREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTI
PDSCLPLGMSQEDNQLKLVPVTPGRDMVHHLLSVSTADSPDDNISETSVAGFIVVTGVDL
ERQVFTVLSPAPRPLPKNFLLLMDIRFMDLK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggggctctcgcaccttctgctgggtgtggatgttgccatgggctttgctgtgggcatg
gctgtgggtgctgctctcgtcattgccgtgggcaccacctgcgttcccacaaccatccca
ggctggacccacgggcgcctggctgattttgccctgtgcccgcaggcgcccgtggtgggg
cggctggagctgagcggggggctgagcctggtggtggtggtgccatgggggcccctgggg
gcactggggaccctggagcgggcactggaccccctggccttcctggggctgctgtggcgg
gcagcccgcacccctccccaggccaccgccctggccctgccccgcatgcgcctcgacctc
gccctggacgggggggccccgggcatccccgcgggggtggcactgaggacgggtgccgca
gactatgggctgttcctggacgcggagctgtgcgggctggcgcagggcccggcggtggcg
gtggacgcggcatggcaccgtgcgatcacgtcccgcctggccgacgtcttcaaccagcgt
tgcgaggtgaatcgccgcgcctcagtgagcggctgtgtcatcaacacctgcggctgggtg
aagggctcgggctaccaggcgctggtgcacgccgcctccgccttcgaggtggacgtggtg
gtggtgctggatcaggagcggctctacaacgagctgaagagggacctgccccactttgtg
cgcaccgtcctgctccccaagtccggcggtgtagtggagcgctccaaggacttccggcgg
gagtgccgggatgaccgcatccgggagtatttctacggcttccggggctgcttctaccct
cacgcctttgatgtcaagttctctgacgtcaagatctacaaggtgggggctcccaccatc
ccggactcctgcctgccgttgggcatgtcgcaggaggacaaccagctgaagctggtgccg
gtgacgccagggcgggacatggtgcaccacctcctgagcgtcagcaccgctgacagccct
gacgacaacatctcggagaccagcgtggctggcttcatcgtcgtcaccggcgtcgacctg
gagcgccaggtcttcaccgtcctctccccggcccctcgccccctgcccaagaacttcctc
ctcctcatggacattcgcttcatggacctgaagtag
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