Opisthocomus hoazin (hoatzin): 104336384
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Entry
104336384 CDS
T08436
Symbol
NUP98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03013
Nucleocytoplasmic transport
oha05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104336384 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104336384 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oha03019
]
104336384 (NUP98)
03036 Chromosome and associated proteins [BR:
oha03036
]
104336384 (NUP98)
Messenger RNA biogenesis [BR:
oha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104336384 (NUP98)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104336384 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
104336384
NCBI-ProteinID:
XP_009940517
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGTTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FPFGNTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAASTNAGTGFGTGAGLFGQANTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGSGLFGFGASNTGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSXXXXXXXXXXXXXDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSHLFDGLDDDEPALSNGAFMPKKSIKKLVLKNLNSSNLFSPVNR
ENEDLASPSEYPENGDGFFLSVPPDENHRQDGEREEEEDHHEVTRFYTNPIAKPIPQTPE
NAAHKHQNSVDDTIVALNMRVALRNGLEGSSEDASFHDDSLQDEREEEPETVYHLHPAGI
VLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDDIVHI
RRKEVIVYPDDERKPPVGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMNYEGRLEA
VSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHSSKVDTKKLKTTAVPPPGH
LPPQQMALNGKPPPASQTPEVEQLGRVVELDSDMADITQEPPQEPVVEEDAIEEPEAVPA
STHIASTLGINPHVLQIMKASLLADEDDLDLILDPYSGKQHVKMDTSQEICSPRLPISKS
RGQKRYSAGGLLQAKFANVIFQSPSAALPDFQGPRALSSPPSATLWSAISPLTSAFSVPP
SVPEVQMKTVGVRRQQGLVPLEKSVTYGRGKLLMDMALFMGRSFRVGWGPNWTLVNCGDQ
LSGSSEAEDLQCESVEYGFLPTPVAPKSLSESPFKVHVEKLSLEQRKMDRDKELYLTPLE
IKLKHSTVHMDEECPLLAPNPGVSAIHDYADWVRKAFEDPAVTETVVKHWCLTWTLCEAI
WGTLKELEASLEEPSEYIVALERRKAFSRWLSETAAGRIEEEVSLSRHSNPVEAVFSCLT
GKRIGEACRLAQQAGELLKSLPFFXGVRGGMKTTXTLRADGGXLSAPTAEMSRGRRVFAL
LAGKPVWQLSERVNINVCSLLDWKRCVAVHLWYLLPPTASISQALAVYESAFQNTPECEK
YACCPLPPYLEGSRCVTEEDNAGRPLRDVCFHLLKLYSDRHHDLDQLLDPRSVTSDPLDY
RLSWHLWEVLRALNYTHLLKQGQGVLNASYAAQLESEGLWEWAVFVLLHEPDAHTRERAV
RELLGRHCALAETPESWAKETFLTQRLCVPPAWLHEAKAVRARMEGDKHKEALFLFKAGH
WNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWEVAGLVYLDYIRVIEM
LDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHSAKDRLAQSDMAKRIANLLRAVLSLL
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcgtttggaactccgtttggaggcagcactggctttgggacaacttca
actttcggacaaaatgctggcttcggtacgacgagcggaggagcgtttggaacgtcagcc
tttgggtcgaacaacaacaccgggggcctcttcgggactacgcagacaaagccaggcggg
ttgtttggttcgacgacgtttaatcagccagccacctcctccacgagcactggctttggg
tttggaacgtccactgggacctccaatagcctgtttggaactaccagcactggtggaggc
ctcttctcatcccaaaataatgccttcgcgcagaacaagccagctgggtttggaaacttt
ggaaccagcaccagcagtggaggtctctttggcaccacgaacacgacttccaatcctttc
gggagtacctctggctctctctttggcccaactagttttaccgcagctccaactggcacg
actattaagttcaatccaccgactggtacagataccatggtaaaatctggagttagcacc
aacatcaataccaagcaccagtgtattactgctatgaaagaatacgaaagcaagtccctc
gaggaactccgtttagaagactaccaggcaaacaggaaagggccctcgaatcctgttgga
gcaggagcagctgcaggcttgtttgggtcatctactgctacgtcgagtacagctaccggg
ctttttggctcttccactactaacacaggcttttcgtatggacagaacaaaactgctttt
ggaaccagtacgactggctttggaacgggaacaacaggggggctttttggtcagcagtct
caaaccacgagtctgtttaacaagccgtttggccaagccacgacaacgcagaacactggc
tttcctttcgggaataccagcactctggggcagccaaacaccaacacaatgggtctcttt
ggggtaacccagccctcgcagcctggaggcctttttggaacagctgccagtacaaatgct
ggtactgggtttggaaccggagctggcctttttggacaagctaacacaggatttggtgtt
ggcggttcgaccctgtttggcaacaagcctgctggattcggaaccaccacgaccagcgct
ccctcgtttggcacaaccactggcagcgggctctttggttttggtgccagcaatactgga
aatagtttgtttggaaacaaacctgcaactgggactctgggaactggacttggaacaggg
tttggaacagctcttggggcaggacagacttctctatttggaaacacccagcccaagctt
ggtggaacactaggaacgggagcgtttggagcaccaggattcaatacatcaacagcgacg
ctgggcttcggagccccgcagcctgctgtcgctctgacagacccaaatgcatcggctgcc
cagcaggcagtccttcagcagcatctcaacagcttgacttactcnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnngacccaaagaagaaagaagagaggctgaagccaact
aacccggcagctcagaaggccttaacgacacccacccactacaaactgactccgcgcccc
gcgaccagagtgcgacccaaagctctgcagtcggctggctccgctaaatctcatctcttt
gatggtctcgatgatgacgagccagccctgtccaacggtgccttcatgccaaagaagagc
atcaagaagttggttttgaagaatctcaacagtagcaatctgttctcgcctgttaatcgc
gaaaatgaagacctggcttctccctcggagtatccggagaatggagatgggttcttcttg
tcggtacctcccgatgaaaaccacaggcaagatggtgagcgagaagaggaggaggatcac
cacgaagtgactcggttttacactaaccccattgccaagcccatcccgcagaccccggag
aacgctgcgcacaaacaccagaacagcgtggacgataccatcgtggctctgaacatgcgg
gtggccttgcggaatggtctggagggcagcagtgaagatgcctcgtttcacgacgattcc
cttcaggacgaacgcgaagaggagcctgagacggtgtatcatctgcatcccgcagggatt
gtcctcaccagagccggctactacaccatcccctccatggaggagctggccaggtttacg
aacgacagaaacgaatgtatcgtgacagacttcaccataggccgcaaaggttatggatcc
atttacttcgaaggagaggtgaacctgacgaacttaaatctggatgacattgtgcacatc
cgtaggaaagaagttattgtctaccctgacgatgaaaggaagccacccgttggcgaaggt
ttaaatagacgagctgaagtcaccttggatggagtctggcctacggataaaacctctcgg
tgcctgataaaaagccctgaacgactggcagagatgaattacgaaggcagactggaggct
gtctctcggaagcagggcgctcggttcaaggaataccgcccagagacgggatcctgggtg
ttcaaggtggcacacttctccaagtacggcttgcaagattcagatgaggaggaggaggaa
cattcttcaaaagtggacaccaagaaactgaaaactacagcagtgccgcccccggggcat
ctgccaccccagcaaatggccctgaacggcaaaccaccacctgcctctcagaccccggag
gtggagcagctgggccgggtggtggagctggacagtgacatggcggacatcacccaggag
cctccccaggagcccgtggtggaagaggacgcgatagaagagccagaggcagtgcctgct
tccactcacatcgcgtcaaccctgggtattaacccccacgtcttacagattatgaaagct
tctttgcttgctgacgaagacgacctagacctgatcctggatccttattccgggaaacag
catgtgaaaatggatacttctcaagagatctgttcgccgaggctccctatttcaaaatca
cgaggacagaagagatactcagctggtgggctgctgcaggcaaaatttgcaaacgtgatt
ttccagtctccgagcgctgctctgccagatttccagggacccagggctctgagcagtccc
ccttctgccaccctttggtcggccatttcgccgttgacgtctgcgttctctgtgcctccg
tcggtccccgaggtgcagatgaaaaccgttggtgtccgcaggcagcaggggcttgtgcct
ctggagaagtcggtcacctacggaagggggaagctcctgatggacatggctctcttcatg
gggcgctcgtttcgcgttggctggggacccaactggacgcttgtcaactgtggagatcag
ttgagtggctcaagtgaagcggaagatcttcagtgtgagtctgtggagtacggattcctg
ccaacccctgttgctcccaaatccctctcggagtcccctttcaaggttcatgtggagaag
ctgagcttagagcagcggaagatggacagagacaaagagctgtatctcacccctctggag
atcaagctgaagcacagcactgtccacatggatgaagagtgtcctcttctggcccccaat
ccaggagtttctgctattcacgactacgctgactgggttagaaaagcatttgaggatcct
gctgtaacagagaccgtcgtgaagcactggtgcctgacgtggactttatgtgaagccatc
tgggggaccctgaaggagctggaggccagcttggaggagcccagcgagtacatcgtagcc
ctggagcgcaggaaggccttctcccgctggctgtcggagactgccgcggggcgcattgag
gaagaagtctccttgtcccgacacagcaaccccgtggaggccgtgttcagctgcctgacc
gggaagaggatcggggaagcttgccggctggcacagcaggcaggtgagctgctgaaatct
ctcccctttttttgaggggtgaggggaggcatgaagacaacttgaactttgagagctgat
ggtgggtaactgtccgctccaactgcggagatgtcccgtgggcggcgcgtcttcgccctg
ctcgcggggaagcctgtgtggcagttatcagagagagtaaacatcaacgtgtgctcgctg
ctggactggaagcgctgcgtggctgtccacctctggtaccttcttcctccgacagcttcc
atttcccaggcgctggccgtgtacgagtccgcgtttcagaacacgccagagtgtgaaaaa
tacgcctgctgtcctctgcctccttacctggaaggttctcggtgtgtaactgaagaagat
aacgcagggagacctctgagagatgtctgtttccatctgttgaagctctacagcgacagg
caccacgatctcgaccagctgctggacccccgcagcgtcacgtccgaccccctggactac
cgcctgagctggcacctgtgggaagtgctcagagccctcaactacacccatctcctgaag
cagggccagggcgtgctgaacgcgagctacgctgcccagctggagagcgaggggctctgg
gagtgggctgtcttcgtcctgctgcacgagcccgatgcccacacgcgggagcgggccgtg
cgggagctcctcggtcggcactgcgctctcgccgagacgccggagtcttgggccaaggag
acgtttctgacgcagaggctctgcgtccccccggcgtggctgcatgaagcgaaggcggtt
cgagcgaggatggagggcgacaagcacaaggaagccctcttcttgttcaaggccgggcac
tggaaccagtgtcacaagctggtggtcaggcacttggcctcagatgccataattaatgag
aactacaagtacctaaaaggattcctggaagaccttgcccctccggagcgcagcgcgctc
atccaggactgggaggtggcggggctggtttacctggactacatccgcgtgatcgagatg
ctggataggatccaacagctggattgttccacctacgagctggagcgcttacacaccaaa
gtgacgtcgctgtgcaacaggatagagcagatccagtgccacagcgcgaaggaccgcctg
gcccagtcagatatggccaagcgcatcgccaacctcctgcgggccgtcctcagcctgctc
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integrated database retrieval system
