Opisthocomus hoazin (hoatzin): 104336446
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Entry
104336446 CDS
T08436
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oha
Opisthocomus hoazin (hoatzin)
Pathway
oha03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104336446 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oha03021
]
104336446 (TAF5)
03036 Chromosome and associated proteins [BR:
oha03036
]
104336446 (TAF5)
Transcription machinery [BR:
oha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104336446 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
104336446 (TAF5)
Chromosome and associated proteins [BR:
oha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104336446 (TAF5)
STAGA complex
104336446 (TAF5)
TFTC complex
104336446 (TAF5)
SAGA complex
104336446 (TAF5)
SLIK complex
104336446 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
104336446
NCBI-ProteinID:
XP_009940588
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MRNRALGVLAIGGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAE
LSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNE
TMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAM
VGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSK
KQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTA
VDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASE
LKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP
YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWD
VLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIY
ALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMT
KSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacagagctcttggagtattagcgattggaggaggcgttgttgtggaagatcag
ccagatgtgagtgcagtgttgtctgcctacaatcagcagggagacccgacgctgtatgag
gaatactacagtggattaaaacacttcattgagtgttccctggactgtcatcgagcagaa
ttgtctcagctgttttatcctctctttgtgcacatgtacttggaattggtctacaatcaa
catgagagtgaagcaaagtctttttttgaaagatttcatggggatcaggagtgctattac
caggatgacctgcgtgtattgtctagcttaaccaaaaaagaacatatgaaaggtaacgag
accatgctggattttcgaacaagcaaatttgtgctgcgtatttcccgtgactcttaccaa
ctcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggaa
catctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatg
gttggaagcttggccggggaggcaaaacgagaggctaataaagcaaaggttttctttggc
ttgttgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaat
gaggaaggaaagccaaagaagaaaaaacctaaaaaagatagtgtagggtcaaaaagtaaa
aaacaagaccctaatgctcctccccagaacagaattcctctgcctgaactgaaagactct
gacaagctggataaagtaatgaatatgaaagaagctgcaaggcgtgtgcgtcttggccca
gagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctgactgca
gtggatattacagatgactctagcatgatcgtaggaggctttgctgactctactgtcaga
gtgtggtctgtgactccgaaaaagctacgtagtgtgaaaacagcagcagacctcagtctc
attgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgag
ttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgatagg
aactatctgttgtcctgttctgaggatggcactgtcagattgtggagtctccaaacgttc
acatgtttggtgggatataaaggacacaactaccccgtatgggatacacaattctctcct
tatggttattattttgtgtcagggggacatgacagagtggctcgtctgtgggcaacagat
cactaccagcctttacggatatttgctggccatcttgctgatgtgacgtgtactcgattt
catccaaactccaactatattgccacgggctcagcagacaggactgtgcggctctgggat
gttttgaatgggaattgcgtgagaatattcactggacataagggaccaattcattcattg
gcattttctcccaatggacgattcctggctactggagcaacagatggaagagttctgctg
tgggacattggacatggcctgatggttggagaattgaaagggcacactgacaccatctac
gcgctcagattcagtagagatggggagattttagcatcaggttcaatggataacacagtt
cgtctgtgggatgctgtgaaagcatttgaagatttagaaaccgatgactttactacagct
actggacacataaacttgccagaaaactcacaggagttgttactaggtacatacatgacc
aaatcaaccccagttgtacacctccattttacacgcagaaacttgctgctggctgcagga
gcctacagttcgcagtaa
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