KEGG   Opisthocomus hoazin (hoatzin): 104336446
Entry
104336446         CDS       T08436                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
oha  Opisthocomus hoazin (hoatzin)
Pathway
oha03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:oha00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104336446 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oha03021]
    104336446 (TAF5)
   03036 Chromosome and associated proteins [BR:oha03036]
    104336446 (TAF5)
Transcription machinery [BR:oha03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104336446 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     104336446 (TAF5)
Chromosome and associated proteins [BR:oha03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104336446 (TAF5)
    STAGA complex
     104336446 (TAF5)
    TFTC complex
     104336446 (TAF5)
    SAGA complex
     104336446 (TAF5)
    SLIK complex
     104336446 (TAF5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th DSE1_N Beta-prop_Aladin PAC11 Beta-prop_RIG_2nd Beta-prop_SCAP CFAP251_N Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 ASA1 Beta-prop_NOL10_N Beta-prop_SPT8 WD_LRWD1 Beta-prop_Nup120_160 Tricorn_2nd DNAI3_WD PEP5_VPS11_N CDK5RAP3 Beta-prop_ACSF4 RAB3GAP2_N eIF2A VID27
Other DBs
NCBI-GeneID: 104336446
NCBI-ProteinID: XP_009940588
LinkDB
Position
Unknown
AA seq 625 aa
MRNRALGVLAIGGGVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAE
LSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNE
TMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAM
VGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSK
KQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTA
VDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASE
LKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP
YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWD
VLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIY
ALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMT
KSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgcggaacagagctcttggagtattagcgattggaggaggcgttgttgtggaagatcag
ccagatgtgagtgcagtgttgtctgcctacaatcagcagggagacccgacgctgtatgag
gaatactacagtggattaaaacacttcattgagtgttccctggactgtcatcgagcagaa
ttgtctcagctgttttatcctctctttgtgcacatgtacttggaattggtctacaatcaa
catgagagtgaagcaaagtctttttttgaaagatttcatggggatcaggagtgctattac
caggatgacctgcgtgtattgtctagcttaaccaaaaaagaacatatgaaaggtaacgag
accatgctggattttcgaacaagcaaatttgtgctgcgtatttcccgtgactcttaccaa
ctcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggaa
catctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatg
gttggaagcttggccggggaggcaaaacgagaggctaataaagcaaaggttttctttggc
ttgttgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaat
gaggaaggaaagccaaagaagaaaaaacctaaaaaagatagtgtagggtcaaaaagtaaa
aaacaagaccctaatgctcctccccagaacagaattcctctgcctgaactgaaagactct
gacaagctggataaagtaatgaatatgaaagaagctgcaaggcgtgtgcgtcttggccca
gagtgcctgccctccatctgtttctacacattccttaatgcttaccagggtctgactgca
gtggatattacagatgactctagcatgatcgtaggaggctttgctgactctactgtcaga
gtgtggtctgtgactccgaaaaagctacgtagtgtgaaaacagcagcagacctcagtctc
attgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagcaagtgag
ttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgatagg
aactatctgttgtcctgttctgaggatggcactgtcagattgtggagtctccaaacgttc
acatgtttggtgggatataaaggacacaactaccccgtatgggatacacaattctctcct
tatggttattattttgtgtcagggggacatgacagagtggctcgtctgtgggcaacagat
cactaccagcctttacggatatttgctggccatcttgctgatgtgacgtgtactcgattt
catccaaactccaactatattgccacgggctcagcagacaggactgtgcggctctgggat
gttttgaatgggaattgcgtgagaatattcactggacataagggaccaattcattcattg
gcattttctcccaatggacgattcctggctactggagcaacagatggaagagttctgctg
tgggacattggacatggcctgatggttggagaattgaaagggcacactgacaccatctac
gcgctcagattcagtagagatggggagattttagcatcaggttcaatggataacacagtt
cgtctgtgggatgctgtgaaagcatttgaagatttagaaaccgatgactttactacagct
actggacacataaacttgccagaaaactcacaggagttgttactaggtacatacatgacc
aaatcaaccccagttgtacacctccattttacacgcagaaacttgctgctggctgcagga
gcctacagttcgcagtaa

DBGET integrated database retrieval system