Opisthocomus hoazin (hoatzin): 104336479
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Entry
104336479 CDS
T08436
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oha03037
]
104336479 (RP1L1)
04812 Cytoskeleton proteins [BR:
oha04812
]
104336479 (RP1L1)
Cilium and associated proteins [BR:
oha03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104336479 (RP1L1)
Cytoskeleton proteins [BR:
oha04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
104336479 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
104336479
NCBI-ProteinID:
XP_009940620
LinkDB
All DBs
Position
Unknown
AA seq
2116 aa
AA seq
DB search
MTQVPANYLSTTSSYKYEQPLPSVAQTSTVTKVSPAKKITFFKSGDPQFAGVKMAINQRS
FKSFNALMDDLSHRVPLPFGVRTITTPRGIHCISELDQLEDGGCYLCSDKKYVKPITITS
GGHRPGPPRNSRPSSSLRRAAQEGKLEDYSTPFTHHGPRIPKKITLVKNGESGFRRSIIL
NRRNARSFKTLLDEISEILQFPVKKLYTADGKKIDSMQALLHCPSVLVCVGREPFKPVSV
ENLRKHSVEKLPDLGPRSNSNNVNQNNEMNFELKAKKSVIHPRSSSSNRSMRFSLSSEKS
YPNGLAASPDNGAPFSNSCARPKPGDLVHSLVNDDIEKRVHVNKDGSLSVEMKVRFRLLN
DETLQWSTQIKKSNVMNQMPCEESGVEEDSGVDPIQKMNPGASSEADESLYSCDIDSYMS
KLEESECNEAHCHSCGKKHQDYDIWKNPMHTSQREEPSVRSTWHTRSSCSNTSSRRRVVH
KKMASVDSLHTTSSEEFSEHIVQESSSYSETIENRMAYRSIKKCMCRSDLSTGASNGEDQ
QEYTQTSTSNSQRPSSLGLMSLSSCENNLDTQDTPEDHEASKTISQNEDENGFEVSSVKC
LKDSVEEVESSRVGSVMSRSSLQSRQSKKNACEETSSVGRSMSSSSLQQAKQEDNTRCST
PSNSVHSKSSNSTTQRAKSKQDDHSDDNVVVSSFSSESCPKREAEEVEAEQEENEINEVS
SVSAKIKSSQSIRDESSEGERCSTQGTPHSRASDRNSKRSDSGEVALCNASCSSRGSKKS
KHSHIHLDAQSEMSVSSLESTPNKKKNSLHADDLRSCSRASNYSKSSCEIKKKSLRDSMT
HNSGSFHSNISSTSEAEAIAWFTEEKSLKSTTNGYSESSKGSKKKSHREENSKPSSLCSS
VSSPNGKAGEGHSRMNSEAPSSRHGSMSESVCSKGDLSTDTGIRNGNPASVSSRISSKSE
VKDKCSLTQISQESDDMCSQSNISQSSKSRQIKTRNLRVKMSNSSRASLSETLSVCSRHC
PAPPKGKPNSKKIRSTMLKNSSISSIGTESVLTTGKEQNEIVDSSKATSYGSKSAATEIN
DQQNNKTDDSCNKKLKEELEGTGMQDEGSDLMPSTLPNTSPEEVVQEWLSKIPSETLLMK
YEMEDDAEEERTEITPEVSCCINAKEISEDEKAEKKDVEEAENEANVEVGIETAEGTTVN
EEAEECVSQEQISEVVSEAAKADQAECSQSVTSSQNNNRRDLPNCIQTSVQIMKALLSSK
HETKFDRSNSLPEVSPTMGRKLSNSANILITCLASLQLLDEEVEDPSDKSKRSNKPRYME
LLNIFQALWFGSAAEKSSPSSGQEASKQAKTASGFKFPKSVNHDFTPMSSSGVDVGSGSG
GSGEESAAGARDCPLMAQKTAECKSVGQVDNVETGTEQTEAEKQSKEEEQSSRPSTACSK
SKGEDEAQSIREDSLIQEAEENKEDQCSTCENENLKEEADQLATTDDTNINDADCGTELK
TDLEEQLEKEPPNDPKPNVNMATSVDTSLVQKNSVDPDPVWVLRLLKKIEKEFMAHYVSA
MNEFKVRWNLQNNQQMDEMILELKEEVSKRIQKSIEKELRKIKARTGKKTPRPPDEPLKR
ESTLQTEQRRRRLQTMHKKSLFSDKNGTQSRLEDTSDFSFDVEDKALSAAFEASISKQMK
EEEYCPCDSCVRKKMASKPTRNPVVATNAPVMKAFDLQQILRLKKNDEEACVSEAAQGIK
TIPSNSVDEAAENGNPNEENDEDELQPGETEVEGNEEKETELNKVGSSALTEDGEGPEIS
ESQNCETEDEEEEEAKKEKEGGKDEEETKEEKEEVSEEEEEQEEETQNEEHEDEETSKVE
DEGDNEAEEAEGPEDEDIGAADEEETPECRGDADGSGTDNTVEGNAVEESEGDAVEGSEE
AEQDEDEAVEDANLEPGYEACSAEEENNSEGGEKCDENDEEPTSNDPDKAHEKHEDKGNK
NSEKSSKVRCKKASKRLDTLNKAAAFSCYSSVGNFSQQSQKGSEDEGEEECKYDNNPMNN
HPNGEVQSDESSRPSQMYPDSEEEEDKASSCIDPLGDEDQADAESADPKEVEHTDEVQAS
KKKEDSDEINQDDLDF
NT seq
6351 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggtacctgctaactatctgtcaaccaccagctcctacaagtatgagcagccc
cttccctctgtggctcagacaagcacagtcaccaaggtatctccagccaaaaaaataacc
ttcttcaagagtggagatcctcagtttgcaggagtcaagatggccatcaaccagcgaagc
ttcaagagtttcaatgcactcatggatgacctctctcatcgagtcccactgccatttggg
gtacggaccatcaccaccccacgaggaatacattgcatcagtgagctagaccagctggag
gatggaggatgctacctttgctctgacaaaaaatatgtcaagcctattaccattacttct
gggggacacaggccaggccctccacgaaatagtcgtccctccagtagcttgagaagagca
gctcaggagggcaagcttgaagattattccacacctttcactcatcatggccccagaata
cccaagaaaatcactctagttaagaatggagaaagtgggtttcggcgctcaattatcttg
aaccgtagaaatgccaggagtttcaaaacactcctggatgagatttcagagatcctgcag
ttccctgtgaagaagctctacactgctgatgggaagaagatcgacagcatgcaggctctg
cttcactgccccagcgtgctggtgtgtgttggccgggagccatttaaacctgtatcggtg
gagaatttgaggaaacactcggtggagaagctgcccgacctgggtccccgttccaacagc
aacaatgtcaaccaaaacaatgaaatgaactttgaattgaaagccaaaaaaagtgttatc
catccacggtcatcatcaagcaatagatcaatgaggttttctttatcatcagaaaagtca
tatcctaatggtctcgctgcctcaccagacaacggcgcacctttctcaaacagttgcgcg
cgtccaaaacctggggacctggtccattccttggtcaatgacgacatagaaaaacgagtg
catgtgaacaaggatggtagcctgtccgttgagatgaaagttcgcttccgcttgctaaat
gatgagactctgcaatggtctacccagatcaaaaagtccaatgtgatgaaccagatgcct
tgtgaagagtcaggtgtagaggaggacagtggagtagaccccatacagaaaatgaaccca
ggagccagctcagaggcagatgagtcattatattcctgtgatattgattcttacatgtca
aaacttgaggaatcagaatgtaatgaggctcattgtcatagctgtggcaaaaaacaccag
gactacgacatctggaaaaatcccatgcacacatcccagagggaagagcccagtgtacga
agcacctggcacacacggtcgtcatgctccaacacatcttcccgcaggagagtagtccac
aaaaaaatggcttctgtggatagcctccacaccacatccagtgaggaattctctgagcac
attgtgcaagagtcctcatcctactcagagactatagagaacagaatggcatatcgatcc
attaaaaagtgtatgtgtcgaagtgatttgtctacaggtgcttccaatggggaagaccag
caagaatacacgcagactagcacgagcaatagtcagagaccttcatccttgggcttaatg
tcactttcaagctgtgaaaacaacctggatactcaagacacccctgaagaccatgaggcc
agcaaaaccatttcacaaaatgaagatgaaaatggttttgaagtttcctctgtgaagtgc
ttaaaggatagtgtggaagaggttgaaagcagcagagttgggagtgtcatgtcaaggtca
tccctgcagtccagacagagcaagaagaatgcatgtgaagaaacaagtagtgtgggtagg
agcatgtcctcctccagtcttcagcaggcaaaacaagaggataacactaggtgctccact
ccctccaacagtgtgcacagcaagtctagtaattctactacacaaagagcaaagagcaaa
caggatgaccactctgatgacaatgtagtggtctcttccttctccagtgagtcctgccct
aagagagaggctgaagaagttgaagcagaacaagaagaaaatgaaatcaatgaagtcagc
tcagtgtcagcaaaaataaagtccagccaatcaattagagatgagagcagtgaaggtgaa
cgatgctctacacaaggaaccccccattccagagctagtgacaggaacagcaaaagaagt
gacagcggtgaagtcgctctatgcaatgcctcttgctcttccagaggatccaaaaagagc
aaacacagccatattcatttggatgcacagtctgaaatgtctgtgtcttcacttgaatcc
accccgaataaaaagaagaattcgctacatgcagatgatctgagatcatgcagcagggca
tctaattactccaaaagttcatgtgaaatcaagaaaaaatctctcagagactccatgact
cataactcaggatcttttcactcaaacatttcatctactagtgaagcagaggcaattgca
tggtttactgaggagaaaagcttgaaaagtaccaccaatggctacagtgaatcctcaaaa
ggctcaaagaagaaaagccatagagaagaaaatagcaagccatcatccctctgctcaagc
gtttcaagccctaatggaaaagctggagagggtcattccaggatgaattcagaggcccct
tcttcaagacatggaagtatgagtgagagcgtatgttcaaaaggtgacctctcaacagat
actgggattaggaatggaaatcctgcaagtgtctcttcaagaatctcctcaaagtcagaa
gtaaaagataaatgctcattgacacagatatcccaggaaagtgatgatatgtgttcacag
tcaaacatatctcagtcttcaaaatcaaggcagataaaaactaggaatcttcgtgtgaag
atgtcaaattccagccgagcatcattgtcggagactttgtcagtatgtagtagacattgc
cctgccccacctaaaggcaagccaaacagcaaaaaaatacgttctaccatgttgaagaat
tcctccattagcagcataggtactgagtcagtgttgaccacaggaaaagagcagaatgaa
attgtagattcctctaaagcaacttcctatgggtctaaatcagctgcaactgaaataaat
gatcaacagaataataagactgatgattcttgcaacaaaaaattgaaggaagagttagaa
ggcacaggcatgcaggacgaagggagtgatttgatgccatctactctaccaaatacatct
ccagaagaagttgtgcaagaatggctaagtaaaatcccttcagaaacgttacttatgaaa
tatgaaatggaagatgatgcagaagaggaacgtacagagataacccctgaggtatcatgc
tgtataaatgccaaggaaatctcagaggatgaaaaagctgagaaaaaggatgtggaggag
gctgaaaatgaggcaaatgttgaagtgggaatagagacagcagaaggcactactgttaat
gaagaggctgaagaatgcgtgagtcaggaacaaatctctgaggttgtgtctgaagctgcc
aaagctgaccaggcagaatgcagccagtcggttacatccagccaaaataacaacagaaga
gacctgccaaattgtatccagacttctgtccaaatcatgaaggccttgctcagttcaaaa
catgaaacaaaatttgaccgatcaaacagtttgcctgaagtgtcccccaccatggggaga
aaactgagtaactctgccaacattctgattacttgtcttgccagtctccagctccttgat
gaagaggtagaagatccatcagataaatcaaaacgttcaaataagccaaggtatatggag
ctgctgaatatttttcaagccttgtggtttggaagtgcagctgaaaaaagtagtccaagt
tctggtcaagaggcaagcaagcaggcaaagacagcctctgggtttaaattccccaaatct
gtaaatcatgacttcactcctatgtcctcctctggggttgatgttggcagtggttctggt
ggctcaggagaagagagtgcagctggtgccagggactgtcctttaatggcacagaaaact
gctgaatgcaaatcagttggacaagtggacaatgtagagactggcactgaacagactgag
gctgagaagcaaagtaaagaggaagagcaatcatcccgaccttcgacagcctgctcaaaa
tcaaaaggtgaagatgaagcacagtctatcagagaggactctctaattcaggaggcagaa
gagaataaggaggatcaatgcagtacctgtgaaaatgaaaatcttaaagaggaagctgat
caactagccactactgatgacacaaacatcaatgatgctgattgtgggacagaattgaaa
actgatttggaagagcaacttgaaaaagagcctccaaatgacccaaaacccaatgtcaat
atggccaccagtgtggacacatcccttgtacaaaaaaactcagtggacccagacccagtc
tgggtcctgaggctgctcaagaaaatcgagaaggagttcatggctcactatgtcagtgcc
atgaatgaattcaaagtcaggtggaacctgcagaacaaccagcagatggatgaaatgata
ctggagctgaaggaggaagtgagcaaaaggatacaaaaaagcatagagaaggagctgagg
aagatcaaagccagaacagggaagaagacaccaagacctccggatgaaccactcaagcgt
gagtcaacacttcaaactgagcagaggagacggcgattacagactatgcataaaaagtca
ctcttcagtgacaagaatggaacccagagtaggctagaggacacatcagacttctcattt
gatgtagaagataaagcacttagtgctgcttttgaggccagtattagtaaacaaatgaaa
gaggaggaatattgcccatgtgactcttgtgtcaggaaaaaaatggcttccaaacccaca
agaaacccagtggtggccaccaatgccccagtcatgaaagcatttgatttacagcaaatc
ctgaggttgaagaaaaatgatgaggaagcctgtgtctcagaagcagcccagggcatcaaa
acaattcccagcaattctgtggatgaagcagcagaaaatggcaatccaaatgaggagaat
gatgaggatgaactccagccaggtgaaacagaagtggagggcaatgaagaaaaggagaca
gaattaaacaaagtgggcagctcagcattgactgaagatggagaaggacctgaaatatca
gagagtcaaaactgtgagacggaggatgaggaggaagaagaagcaaaaaaagaaaaagag
ggaggaaaagatgaggaagaaacaaaagaagagaaggaggaagtaagtgaggaagaggaa
gaacaagaagaagagactcaaaatgaagagcatgaagatgaagagacatccaaagttgaa
gacgaaggtgacaatgaagctgaagaagcagaggggccagaggatgaggacattggggct
gctgatgaggaagagacgcctgaatgcagaggagatgctgatgggtctggaactgacaac
actgttgaaggaaatgctgtagaagaaagtgaaggagatgctgtagaaggaagtgaagaa
gctgagcaggatgaagatgaggcagtggaagatgcaaatctggagccaggatatgaggca
tgttcagctgaggaggaaaacaacagtgaaggaggtgagaaatgtgatgagaatgatgag
gaacctaccagcaatgaccctgataaggcacatgaaaaacacgaagacaaaggcaacaag
aattctgagaaatcatcaaaggtcagatgcaaaaaagccagcaaaaggctagatactctg
aacaaagcagctgccttttcttgttattcttctgtgggaaacttctcacagcaatctcag
aaggggtctgaagatgaaggtgaagaggaatgcaaatatgacaacaaccccatgaacaac
caccccaatggagaggttcaaagcgacgagagcagcagaccctcacagatgtatcctgac
agtgaggaagaagaggacaaagcatcttcatgcattgatcctttaggagatgaggaccag
gcagatgctgaaagtgcagatccaaaggaggttgaacatactgatgaagttcaggcttct
aaaaagaaagaagactctgatgagattaaccaggatgacctggacttctag
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integrated database retrieval system
