Opisthocomus hoazin (hoatzin): 104336662
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Entry
104336662 CDS
T08436
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
oha
Opisthocomus hoazin (hoatzin)
Brite
KEGG Orthology (KO) [BR:
oha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oha04121
]
104336662 (TRIM50)
Ubiquitin system [BR:
oha04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104336662 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-C3HC4_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-Nse
Prok-RING_4
Sina_RING
CRLF3_N
zf-ANAPC11
Rotamase
zf-RING_6
U-box
Vps53_N
Nup54
ATG17_like
PTPA
Motif
Other DBs
NCBI-GeneID:
104336662
NCBI-ProteinID:
XP_009940813
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MARRMSIDELEDQLLCPICLEVFKEPLMLQCGHSYCKSCVVSLSGELDAQFLCPVCRQRV
DCSASPPNVTLEELSVLLTDVHQYKRNLDELFSKLINNKSRIANEADVFKWVIRKEFQEL
HRYIDEEKATFLESIEGKAAQLITSIESQVKQTSDALQRLKEVQSSLEALSNESQLDFIR
KYGSSQFRSELPSLHPGDGIFSPVSFKPCFHQDVIKITVWPALALRALLLAPETLKLDPV
TAHPLLELFKGDTVVQCGLYQRRDSNPKRFDCSNCILTCKGFSCGQHYWEVIVGARNH
NT seq
896 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaggatgagcatcgacgagctggaggaccagctcctctgccccatctgcctg
gaggtcttcaaggagcccctgatgctgcagtgtgggcattcatactgcaagtcctgcgtg
gtgtccctctcgggagagctggacgcgcagttcctgtgccccgtgtgccgccagcgcgtg
gactgcagcgcctcgccgcccaacgtcacgctggaggagttgtctgtgctgctgaccgac
gtccaccagtacaagaggaacctggatgaactcttcagcaagctcatcaacaacaaaagc
cgcatcgcaaacgaggcggatgtcttcaagtgggtgatccggaaggagttccaggagctg
cacaggtacatcgacgaggagaaggccaccttcctggagagcatcgaggggaaggcagcc
cagctcatcacctccatcgagtcccaggtgaagcagacgtccgacgccctgcagaggctg
aaggaggtgcagagctccctggaggcgctcagcaacgaaagccagcttgatttcatccgg
aaatacggctcctcccagttcaggtcagagctccccagcctccaccccggcgacggcatc
ttcagccccgtgtccttcaagccgtgcttccaccaggacgtcatcaagattaccgtgtgg
ccggctctggcgctgcgtgctctccttctagctccggagacgctgaagctggacccggtg
acagcgcatcccctcctggagctcttcaagggtgacaccgtggtgcagtgcgggctctac
cagcgccgggacagcaaccccaagcgctttgactgcagcaactgcatcctcacctgcaag
ggcttctcctgcgggcagcactactgggaggtgattgtcggcgccaggaaccactg
DBGET
integrated database retrieval system
